RNA–Protein interactions for RNA: ENST00000367893.4

LMX1A-203, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1A, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-203ENST00000367893 SPAG5Q96R06 1193 aa13.57□□□□□ -0.24
LMX1A-203ENST00000367893 PHF7Q9BWX1 381 aaPredicted RBP13.57□□□□□ -0.24
LMX1A-203ENST00000367893 SMYD3Q9H7B4 428 aa13.57□□□□□ -0.24
LMX1A-203ENST00000367893 CISHQ9NSE2 258 aa13.57□□□□□ -0.24
LMX1A-203ENST00000367893 ABHD10Q9NUJ1 306 aa13.57□□□□□ -0.24
LMX1A-203ENST00000367893 L1RE1Q9UN81 338 aa13.57□□□□□ -0.24
LMX1A-203ENST00000367893 PRG3Q9Y2Y8 225 aaPredicted RBP13.57□□□□□ -0.24
LMX1A-203ENST00000367893 WDFY4Q6ZS81 3184 aa13.57□□□□□ -0.24
LMX1A-203ENST00000367893 ARHGEF37A1IGU5 675 aa13.56□□□□□ -0.24
LMX1A-203ENST00000367893 LRRC53A6NM62 1247 aa13.56□□□□□ -0.24
LMX1A-203ENST00000367893 GOLGA6L6A8MZA4 724 aa13.56□□□□□ -0.24
LMX1A-203ENST00000367893 NT5C1B-RDH14C9J2C7 533 aa13.56□□□□□ -0.24
LMX1A-203ENST00000367893 GABRDO14764 452 aa13.56□□□□□ -0.24
LMX1A-203ENST00000367893 TRAPPC3O43617 180 aa13.56□□□□□ -0.24
LMX1A-203ENST00000367893 HUS1O60921 280 aa13.56□□□□□ -0.24
LMX1A-203ENST00000367893 CILPO75339 1184 aa13.56□□□□□ -0.24
LMX1A-203ENST00000367893 TADA2AO75478 443 aa13.56□□□□□ -0.24
LMX1A-203ENST00000367893 TYMPP19971 482 aa13.56□□□□□ -0.24
LMX1A-203ENST00000367893 WARSP23381 471 aaKnown RBP13.56□□□□□ -0.24
LMX1A-203ENST00000367893 STAT1P42224 750 aa13.56□□□□□ -0.24
LMX1A-203ENST00000367893 ADKP55263 362 aaKnown RBP13.56□□□□□ -0.24
LMX1A-203ENST00000367893 CDH8P55286 799 aa13.56□□□□□ -0.24
LMX1A-203ENST00000367893 KRT17Q04695 432 aa13.56□□□□□ -0.24
LMX1A-203ENST00000367893 ELAVL2Q12926 359 aaKnown RBP13.56□□□□□ -0.24
LMX1A-203ENST00000367893 E4F1Q66K89 784 aaPredicted RBP13.56□□□□□ -0.24
LMX1A-203ENST00000367893 SCARA5Q6ZMJ2 495 aa13.56□□□□□ -0.24
LMX1A-203ENST00000367893 CCDC186Q7Z3E2 898 aa13.56□□□□□ -0.24
LMX1A-203ENST00000367893 TMC7Q7Z402 723 aa13.56□□□□□ -0.24
LMX1A-203ENST00000367893 IRF2BP2Q7Z5L9 587 aa13.56□□□□□ -0.24
LMX1A-203ENST00000367893 FMNL3Q8IVF7 1028 aa13.56□□□□□ -0.24
LMX1A-203ENST00000367893 TMEM86AQ8N2M4 240 aa13.56□□□□□ -0.24
LMX1A-203ENST00000367893 PDCL2Q8N4E4 241 aa13.56□□□□□ -0.24
LMX1A-203ENST00000367893 WHAMMQ8TF30 809 aa13.56□□□□□ -0.24
LMX1A-203ENST00000367893 FAM122AQ96E09 287 aa13.56□□□□□ -0.24
LMX1A-203ENST00000367893 PANX2Q96RD6 677 aa13.56□□□□□ -0.24
LMX1A-203ENST00000367893 MRPL45Q9BRJ2 306 aaKnown RBP13.56□□□□□ -0.24
LMX1A-203ENST00000367893 VN1R3Q9BXE9 311 aa13.56□□□□□ -0.24
LMX1A-203ENST00000367893 ZBP1Q9H171 429 aa13.56□□□□□ -0.24
LMX1A-203ENST00000367893 DSEQ9UL01 958 aa13.56□□□□□ -0.24
LMX1A-203ENST00000367893 PCDHB8Q9UN66 801 aa13.56□□□□□ -0.24
LMX1A-203ENST00000367893 MUC6Q6W4X9 2439 aa13.55□□□□□ -0.24
LMX1A-203ENST00000367893 SYN3O14994 580 aa13.55□□□□□ -0.24
LMX1A-203ENST00000367893 ODC1P11926 461 aa13.55□□□□□ -0.24
LMX1A-203ENST00000367893 FGFR3P22607 806 aa13.55□□□□□ -0.24
LMX1A-203ENST00000367893 CLCN1P35523 988 aa13.55□□□□□ -0.24
LMX1A-203ENST00000367893 PRKCIP41743 596 aa13.55□□□□□ -0.24
LMX1A-203ENST00000367893 RAP1GAPP47736 663 aa13.55□□□□□ -0.24
LMX1A-203ENST00000367893 GOLGA8FQ08AF8 430 aa13.55□□□□□ -0.24
LMX1A-203ENST00000367893 GOLGA8DPQ0D2H9 430 aa13.55□□□□□ -0.24
LMX1A-203ENST00000367893 SMC1AQ14683 1233 aaKnown RBP13.55□□□□□ -0.24
LMX1A-203ENST00000367893 MEA1Q16626 185 aa13.55□□□□□ -0.24
LMX1A-203ENST00000367893 SFMBT2Q5VUG0 894 aa13.55□□□□□ -0.24
LMX1A-203ENST00000367893 WSCD1Q658N2 575 aa13.55□□□□□ -0.24
LMX1A-203ENST00000367893 LLGL2Q6P1M3 1020 aa13.55□□□□□ -0.24
LMX1A-203ENST00000367893 FUT10Q6P4F1 479 aa13.55□□□□□ -0.24
LMX1A-203ENST00000367893 WDR59Q6PJI9 974 aa13.55□□□□□ -0.24
LMX1A-203ENST00000367893 DSTYKQ6XUX3 929 aa13.55□□□□□ -0.24
LMX1A-203ENST00000367893 HFE2Q6ZVN8 426 aa13.55□□□□□ -0.24
LMX1A-203ENST00000367893 UNC93AQ86WB7 457 aa13.55□□□□□ -0.24
LMX1A-203ENST00000367893 HASPINQ8TF76 798 aa13.55□□□□□ -0.24
LMX1A-203ENST00000367893 MMS19Q96T76 1030 aa13.55□□□□□ -0.24
LMX1A-203ENST00000367893 GPR62Q9BZJ7 368 aa13.55□□□□□ -0.24
LMX1A-203ENST00000367893 CDH22Q9UJ99 828 aa13.55□□□□□ -0.24
LMX1A-203ENST00000367893 NME7Q9Y5B8 376 aa13.55□□□□□ -0.24
LMX1A-203ENST00000367893 HCFC2Q9Y5Z7 792 aa13.55□□□□□ -0.24
LMX1A-203ENST00000367893 SF3B1O75533 1304 aaKnown RBP eCLIP13.55□□□□□ -0.24
LMX1A-203ENST00000367893 I3L4J1 428 aa13.54□□□□□ -0.24
LMX1A-203ENST00000367893 CLASP2O75122 1294 aaKnown RBP13.54□□□□□ -0.24
LMX1A-203ENST00000367893 CLSTN1O94985 981 aa13.54□□□□□ -0.24
LMX1A-203ENST00000367893 OAZ2O95190 189 aa13.54□□□□□ -0.24
LMX1A-203ENST00000367893 PNMA6AP0CW24 399 aaPredicted RBP13.54□□□□□ -0.24
LMX1A-203ENST00000367893 FERP16591 822 aa13.54□□□□□ -0.24
LMX1A-203ENST00000367893 HOXD11P31277 338 aaPredicted RBP13.54□□□□□ -0.24
LMX1A-203ENST00000367893 LHX1P48742 406 aa13.54□□□□□ -0.24
LMX1A-203ENST00000367893 RAD23BP54727 409 aa13.54□□□□□ -0.24
LMX1A-203ENST00000367893 CDK17Q00537 523 aa13.54□□□□□ -0.24
LMX1A-203ENST00000367893 MRPL58Q14197 206 aaKnown RBP13.54□□□□□ -0.24
LMX1A-203ENST00000367893 HGSNATQ68CP4 663 aa13.54□□□□□ -0.24
LMX1A-203ENST00000367893 TMEM270Q6UE05 265 aa13.54□□□□□ -0.24
LMX1A-203ENST00000367893 OSTM1Q86WC4 334 aa13.54□□□□□ -0.24
LMX1A-203ENST00000367893 ADGRF2Q8IZF7 708 aa13.54□□□□□ -0.24
LMX1A-203ENST00000367893 VPS52Q8N1B4 723 aa13.54□□□□□ -0.24
LMX1A-203ENST00000367893 EDAQ92838 391 aa13.54□□□□□ -0.24
LMX1A-203ENST00000367893 PCDHB4Q9Y5E5 795 aa13.54□□□□□ -0.24
LMX1A-203ENST00000367893 IRAK3Q9Y616 596 aa13.54□□□□□ -0.24
LMX1A-203ENST00000367893 CYP26A1O43174 497 aa13.53□□□□□ -0.24
LMX1A-203ENST00000367893 GFPT2O94808 682 aa13.53□□□□□ -0.24
LMX1A-203ENST00000367893 PAEPP09466 180 aa13.53□□□□□ -0.24
LMX1A-203ENST00000367893 CCDC172P0C7W6 258 aa13.53□□□□□ -0.24
LMX1A-203ENST00000367893 CTSAP10619 480 aa13.53□□□□□ -0.24
LMX1A-203ENST00000367893 HOXB8P17481 243 aaPredicted RBP13.53□□□□□ -0.24
LMX1A-203ENST00000367893 CD58P19256 250 aa13.53□□□□□ -0.24
LMX1A-203ENST00000367893 GNL1P36915 607 aaPredicted RBP13.53□□□□□ -0.24
LMX1A-203ENST00000367893 NDST1P52848 882 aa13.53□□□□□ -0.24
LMX1A-203ENST00000367893 BPIFB4P59827 614 aa13.53□□□□□ -0.24
LMX1A-203ENST00000367893 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.53□□□□□ -0.24
LMX1A-203ENST00000367893 DDX53Q86TM3 631 aaKnown RBP13.53□□□□□ -0.24
LMX1A-203ENST00000367893 TMEM139Q8IV31 216 aa13.53□□□□□ -0.24
LMX1A-203ENST00000367893 GPR65Q8IYL9 337 aa13.53□□□□□ -0.24
LMX1A-203ENST00000367893 CRYBG2Q8N1P7 616 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms