RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 TMEM154Q6P9G4 183 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 HELQQ8TDG4 1101 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 MTMR8Q96EF0 704 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 MAGEB10Q96LZ2 347 aaPredicted RBP9□□□□□ -0.97
SYNE1-206ENST00000367253 ZFP42Q96MM3 310 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 UQCC2Q9BRT2 126 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 STK33Q9BYT3 514 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 CIPCQ9C0C6 399 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 BRD8Q9H0E9 1235 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 JPH1Q9HDC5 661 aaPredicted RBP9□□□□□ -0.97
SYNE1-206ENST00000367253 HPS4Q9NQG7 708 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 AFF4Q9UHB7 1163 aaKnown RBP9□□□□□ -0.97
SYNE1-206ENST00000367253 RNF103-CHMP3A0A140T963 221 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 SYNDIG1LA6NDD5 238 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 KCNJ18B7U540 433 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 BMP10O95393 424 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 NCF2P19878 526 aaPredicted RBP9□□□□□ -0.97
SYNE1-206ENST00000367253 HTR1BP28222 390 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 SLCO1A2P46721 670 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 NCKAP1LP55160 1127 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 EHHADHQ08426 723 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 KCNJ12Q14500 433 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 EMBQ6PCB8 327 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 PI16Q6UXB8 463 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 PHACTR4Q8IZ21 702 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 CLYBLQ8N0X4 340 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 MAML3Q96JK9 1138 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 VTA1Q9NP79 307 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 SEC31BQ9NQW1 1179 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 CHRAC1Q9NRG0 131 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 MBD2Q9UBB5 411 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 PCDHGB3Q9Y5G1 929 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 CPDO75976 1380 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 E5RI56 91 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 NPIPA7E9PJI5 369 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 NPIPA8P0DM63 369 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 RPS6KB1P23443 525 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 MAPK9P45984 424 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 SLC26A2P50443 739 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 CACNB3P54284 484 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 DEFA1P59665 94 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 DEFA3P59666 94 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 MAP3K10Q02779 954 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 UBXN2BQ14CS0 331 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 CYTH1Q15438 398 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 RABGAP1LQ5R372 815 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 C6orf183Q5T699 404 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 FBXO38Q6PIJ6 1188 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 G2E3Q7L622 706 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 CDR2LQ86X02 465 aaPredicted RBP9□□□□□ -0.97
SYNE1-206ENST00000367253 PITPNM3Q9BZ71 974 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 SMYD2Q9NRG4 433 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 GALNT8Q9NY28 637 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 BTBD7Q9P203 1132 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 PCDHGB4Q9UN71 923 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9□□□□□ -0.97
SYNE1-206ENST00000367253 IDH3BO43837 385 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 TMCC2O75069 709 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 TNFRSF21O75509 655 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 WDR47O94967 919 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 KELP23276 732 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 C21orf62-AS1Q17RA5 79 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 EFHC2Q5JST6 749 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 C11orf74Q86VG3 221 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 CAMKK1Q8N5S9 505 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 SUCLG2Q96I99 432 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 TIPINQ9BVW5 301 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 SAV1Q9H4B6 383 aaPredicted RBP9□□□□□ -0.97
SYNE1-206ENST00000367253 PANK4Q9NVE7 773 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 PRR12Q9ULL5 1215 aa9□□□□□ -0.97
SYNE1-206ENST00000367253 KLHL33A6NCF5 533 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 TBC1D3BA6NDS4 549 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 PRR23D1E9PI22 279 aaPredicted RBP8.99□□□□□ -0.97
SYNE1-206ENST00000367253 TSPAN4O14817 238 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 LAMTOR5O43504 91 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 PRR23D2P0DMB1 279 aaPredicted RBP8.99□□□□□ -0.97
SYNE1-206ENST00000367253 PLTPP55058 493 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 RBP5P82980 135 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 ZNF284Q2VY69 593 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 FAM26FQ5R3K3 315 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 SPATA1Q5VX52 437 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 DNAJC24Q6P3W2 148 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 RAPH1Q70E73 1250 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 HORMAD1Q86X24 394 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 CPA6Q8N4T0 437 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 CDC26Q8NHZ8 85 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 MAML1Q92585 1016 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 NCLNQ969V3 563 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 AK8Q96MA6 479 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 NUDT16L1Q9BRJ7 211 aaKnown RBP8.99□□□□□ -0.97
SYNE1-206ENST00000367253 FSD1LQ9BXM9 530 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 PARVGQ9HBI0 331 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 PCDHB3Q9Y5E6 796 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 CLIC2O15247 247 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 EPN2O95208 641 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 ZBTB48P10074 688 aaPredicted RBP8.99□□□□□ -0.97
SYNE1-206ENST00000367253 CDC25BP30305 580 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 STX5Q13190 355 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 PDCLQ13371 301 aa8.99□□□□□ -0.97
SYNE1-206ENST00000367253 DCTN2Q13561 401 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms