RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 TRIM68Q6AZZ1 485 aa15.51■□□□□ 0.07
PRKN-204ENST00000366896 MON1BQ7L1V2 547 aa15.51■□□□□ 0.07
PRKN-204ENST00000366896 PRUNE1Q86TP1 453 aa15.51■□□□□ 0.07
PRKN-204ENST00000366896 CYP4X1Q8N118 509 aa15.51■□□□□ 0.07
PRKN-204ENST00000366896 NSUN6Q8TEA1 469 aaKnown RBP15.51■□□□□ 0.07
PRKN-204ENST00000366896 INPP5DQ92835 1189 aa15.51■□□□□ 0.07
PRKN-204ENST00000366896 GPRASP2Q96D09 838 aa15.51■□□□□ 0.07
PRKN-204ENST00000366896 CCDC77Q9BR77 488 aa15.51■□□□□ 0.07
PRKN-204ENST00000366896 PITPNM3Q9BZ71 974 aa15.51■□□□□ 0.07
PRKN-204ENST00000366896 EURLQ9NYK6 297 aa15.51■□□□□ 0.07
PRKN-204ENST00000366896 NKIRAS1Q9NYS0 192 aa15.51■□□□□ 0.07
PRKN-204ENST00000366896 NINJ2Q9NZG7 142 aa15.51■□□□□ 0.07
PRKN-204ENST00000366896 ANAPC5Q9UJX4 755 aa15.51■□□□□ 0.07
PRKN-204ENST00000366896 PCDHA10Q9Y5I2 948 aa15.51■□□□□ 0.07
PRKN-204ENST00000366896 DNAJC25-GNG10A0A024R161 153 aa15.51■□□□□ 0.07
PRKN-204ENST00000366896 SNUPNO95149 360 aaKnown RBP15.51■□□□□ 0.07
PRKN-204ENST00000366896 RALAP11233 206 aa15.51■□□□□ 0.07
PRKN-204ENST00000366896 FOXN2P32314 431 aa15.51■□□□□ 0.07
PRKN-204ENST00000366896 POLGP54098 1239 aaPredicted RBP15.51■□□□□ 0.07
PRKN-204ENST00000366896 YARSP54577 528 aaKnown RBP15.51■□□□□ 0.07
PRKN-204ENST00000366896 RAD23BP54727 409 aa15.51■□□□□ 0.07
PRKN-204ENST00000366896 MRPS35P82673 323 aaKnown RBP15.51■□□□□ 0.07
PRKN-204ENST00000366896 SPOPLQ6IQ16 392 aa15.51■□□□□ 0.07
PRKN-204ENST00000366896 PPP1R21Q6ZMI0 780 aa15.51■□□□□ 0.07
PRKN-204ENST00000366896 SEPT14Q6ZU15 432 aa15.51■□□□□ 0.07
PRKN-204ENST00000366896 TAS1R3Q7RTX0 852 aa15.51■□□□□ 0.07
PRKN-204ENST00000366896 ANKS1BQ7Z6G8 1248 aa15.51■□□□□ 0.07
PRKN-204ENST00000366896 RHOT1Q8IXI2 618 aa15.51■□□□□ 0.07
PRKN-204ENST00000366896 ENDOVQ8N8Q3 282 aaKnown RBP15.51■□□□□ 0.07
PRKN-204ENST00000366896 CEP170P1Q96L14 293 aa15.51■□□□□ 0.07
PRKN-204ENST00000366896 MRPL47Q9HD33 250 aaKnown RBP15.51■□□□□ 0.07
PRKN-204ENST00000366896 UMODL1Q5DID0 1318 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 THSD7BQ9C0I4 1608 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 THAP12O43422 761 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 DGAT1O75907 488 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 NEFHP12036 1026 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 PECAM1P16284 738 aaPredicted RBP15.5■□□□□ 0.07
PRKN-204ENST00000366896 ADCY8P40145 1251 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 NSFP46459 744 aaKnown RBP15.5■□□□□ 0.07
PRKN-204ENST00000366896 PSMD6Q15008 389 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 RBBP5Q15291 538 aaKnown RBP15.5■□□□□ 0.07
PRKN-204ENST00000366896 ZACNQ401N2 412 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 PASD1Q8IV76 773 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 APLFQ8IW19 511 aaPredicted RBP15.5■□□□□ 0.07
PRKN-204ENST00000366896 LMNTD2Q8IXW0 634 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 FAM13CQ8NE31 585 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 DNERQ8NFT8 737 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 EXD1Q8NHP7 514 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.5■□□□□ 0.07
PRKN-204ENST00000366896 ARHGAP28Q9P2N2 729 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 GABBR1Q9UBS5 961 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 STARD13Q9Y3M8 1113 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 STYXL1Q9Y6J8 313 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 SOWAHBA6NEL2 793 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 EXTL3O43909 919 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 STBD1O95210 358 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 PGK2P07205 417 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 GM2AP17900 193 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 GJC1P36383 396 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 SLC18A1P54219 525 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 TAS2R40P59535 323 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 NR1H3Q13133 447 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 SETDB1Q15047 1291 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 LIN9Q5TKA1 542 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 DRICH1Q6PGQ1 229 aaPredicted RBP15.5■□□□□ 0.07
PRKN-204ENST00000366896 GPR142Q7Z601 462 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 VSIG1Q86XK7 387 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 ATP6V0A1Q93050 837 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 ERP27Q96DN0 273 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 BICD1Q96G01 975 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 CNTN6Q9UQ52 1028 aa15.5■□□□□ 0.07
PRKN-204ENST00000366896 EIF4E1BA6NMX2 242 aaKnown RBP15.49■□□□□ 0.07
PRKN-204ENST00000366896 NR3C2P08235 984 aa15.49■□□□□ 0.07
PRKN-204ENST00000366896 SP4Q02446 784 aa15.49■□□□□ 0.07
PRKN-204ENST00000366896 ADCY1Q08828 1119 aa15.49■□□□□ 0.07
PRKN-204ENST00000366896 WDR44Q5JSH3 913 aa15.49■□□□□ 0.07
PRKN-204ENST00000366896 PLEKHA7Q6IQ23 1121 aa15.49■□□□□ 0.07
PRKN-204ENST00000366896 SLC30A9Q6PML9 568 aa15.49■□□□□ 0.07
PRKN-204ENST00000366896 VSIG10LQ86VR7 867 aa15.49■□□□□ 0.07
PRKN-204ENST00000366896 PHF13Q86YI8 300 aaPredicted RBP15.49■□□□□ 0.07
PRKN-204ENST00000366896 ABRAQ8N0Z2 381 aa15.49■□□□□ 0.07
PRKN-204ENST00000366896 FGD4Q96M96 766 aa15.49■□□□□ 0.07
PRKN-204ENST00000366896 C11orf70Q9BRQ4 267 aa15.49■□□□□ 0.07
PRKN-204ENST00000366896 UBN1Q9NPG3 1134 aa15.49■□□□□ 0.07
PRKN-204ENST00000366896 XPNPEP1Q9NQW7 623 aa15.49■□□□□ 0.07
PRKN-204ENST00000366896 TBK1Q9UHD2 729 aa15.49■□□□□ 0.07
PRKN-204ENST00000366896 NAALADL1Q9UQQ1 740 aa15.49■□□□□ 0.07
PRKN-204ENST00000366896 CHKBQ9Y259 395 aa15.49■□□□□ 0.07
PRKN-204ENST00000366896 SCINQ9Y6U3 715 aa15.49■□□□□ 0.07
PRKN-204ENST00000366896 PTPRJQ12913 1337 aa15.49■□□□□ 0.07
PRKN-204ENST00000366896 MAGEB2O15479 319 aa15.49■□□□□ 0.07
PRKN-204ENST00000366896 STRNO43815 780 aa15.49■□□□□ 0.07
PRKN-204ENST00000366896 NPTXRO95502 500 aa15.49■□□□□ 0.07
PRKN-204ENST00000366896 IL9RQ01113 521 aa15.49■□□□□ 0.07
PRKN-204ENST00000366896 LBRQ14739 615 aaKnown RBP15.49■□□□□ 0.07
PRKN-204ENST00000366896 SGSM1Q2NKQ1 1148 aa15.49■□□□□ 0.07
PRKN-204ENST00000366896 FAM47EQ6ZV65 393 aa15.49■□□□□ 0.07
PRKN-204ENST00000366896 ZNF365Q70YC5 407 aa15.49■□□□□ 0.07
PRKN-204ENST00000366896 PLEKHH3Q7Z736 793 aa15.49■□□□□ 0.07
PRKN-204ENST00000366896 TDRPQ86YL5 185 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms