RNA–Protein interactions for RNA: ENST00000366740.5

MRPL55-213, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-213ENST00000366740 PIGRP01833 764 aa12.61□□□□□ -0.39
MRPL55-213ENST00000366740 CYP11A1P05108 521 aa12.61□□□□□ -0.39
MRPL55-213ENST00000366740 CDC25CP30307 473 aa12.61□□□□□ -0.39
MRPL55-213ENST00000366740 DNM1Q05193 864 aaKnown RBP12.61□□□□□ -0.39
MRPL55-213ENST00000366740 KYAT1Q16773 422 aa12.61□□□□□ -0.39
MRPL55-213ENST00000366740 SPATA1Q5VX52 437 aa12.61□□□□□ -0.39
MRPL55-213ENST00000366740 RRAGBQ5VZM2 374 aa12.61□□□□□ -0.39
MRPL55-213ENST00000366740 FSTL4Q6MZW2 842 aa12.61□□□□□ -0.39
MRPL55-213ENST00000366740 SHC4Q6S5L8 630 aa12.61□□□□□ -0.39
MRPL55-213ENST00000366740 DYMQ7RTS9 669 aa12.61□□□□□ -0.39
MRPL55-213ENST00000366740 KBTBD6Q86V97 674 aa12.61□□□□□ -0.39
MRPL55-213ENST00000366740 MYCT1Q8N699 235 aa12.61□□□□□ -0.39
MRPL55-213ENST00000366740 DNAJC19Q96DA6 116 aa12.61□□□□□ -0.39
MRPL55-213ENST00000366740 LPIN3Q9BQK8 851 aa12.61□□□□□ -0.39
MRPL55-213ENST00000366740 HPS4Q9NQG7 708 aa12.61□□□□□ -0.39
MRPL55-213ENST00000366740 LARSQ9P2J5 1176 aaKnown RBP12.61□□□□□ -0.39
MRPL55-213ENST00000366740 STK17AQ9UEE5 414 aa12.61□□□□□ -0.39
MRPL55-213ENST00000366740 PCDHGA5Q9Y5G8 931 aa12.61□□□□□ -0.39
MRPL55-213ENST00000366740 PCNX2A6NKB5 2137 aa12.61□□□□□ -0.39
MRPL55-213ENST00000366740 CEP295Q9C0D2 2601 aa12.6□□□□□ -0.39
MRPL55-213ENST00000366740 ANO9A1A5B4 782 aa12.6□□□□□ -0.39
MRPL55-213ENST00000366740 PIRO00625 290 aa12.6□□□□□ -0.39
MRPL55-213ENST00000366740 OGTO15294 1046 aa12.6□□□□□ -0.39
MRPL55-213ENST00000366740 TRAK2O60296 914 aa12.6□□□□□ -0.39
MRPL55-213ENST00000366740 NMT1P30419 496 aaKnown RBP12.6□□□□□ -0.39
MRPL55-213ENST00000366740 MATR3P43243 847 aaKnown RBP eCLIP12.6□□□□□ -0.39
MRPL55-213ENST00000366740 TUFMP49411 452 aaKnown RBP12.6□□□□□ -0.39
MRPL55-213ENST00000366740 CCDC6Q16204 474 aa12.6□□□□□ -0.39
MRPL55-213ENST00000366740 STPG1Q5TH74 334 aa12.6□□□□□ -0.39
MRPL55-213ENST00000366740 ARMCX5Q6P1M9 558 aa12.6□□□□□ -0.39
MRPL55-213ENST00000366740 TMEM150AQ86TG1 271 aa12.6□□□□□ -0.39
MRPL55-213ENST00000366740 CD302Q8IX05 232 aa12.6□□□□□ -0.39
MRPL55-213ENST00000366740 CMTM8Q8IZV2 173 aa12.6□□□□□ -0.39
MRPL55-213ENST00000366740 CAMKK1Q8N5S9 505 aa12.6□□□□□ -0.39
MRPL55-213ENST00000366740 PDILTQ8N807 584 aa12.6□□□□□ -0.39
MRPL55-213ENST00000366740 LSM14BQ9BX40 385 aaKnown RBP12.6□□□□□ -0.39
MRPL55-213ENST00000366740 SLC46A2Q9BY10 475 aa12.6□□□□□ -0.39
MRPL55-213ENST00000366740 ZCWPW1Q9H0M4 648 aa12.6□□□□□ -0.39
MRPL55-213ENST00000366740 THG1LQ9NWX6 298 aaKnown RBP12.6□□□□□ -0.39
MRPL55-213ENST00000366740 PCDHA7Q9UN72 937 aa12.6□□□□□ -0.39
MRPL55-213ENST00000366740 WDFY3Q8IZQ1 3526 aa12.59□□□□□ -0.39
MRPL55-213ENST00000366740 OTOL1A6NHN0 477 aaPredicted RBP12.59□□□□□ -0.39
MRPL55-213ENST00000366740 CUTAO60888 179 aa12.59□□□□□ -0.39
MRPL55-213ENST00000366740 ATG13O75143 517 aa12.59□□□□□ -0.39
MRPL55-213ENST00000366740 FAM13AO94988 1023 aa12.59□□□□□ -0.39
MRPL55-213ENST00000366740 KCNK5O95279 499 aa12.59□□□□□ -0.39
MRPL55-213ENST00000366740 KRT18P05783 430 aaKnown RBP12.59□□□□□ -0.39
MRPL55-213ENST00000366740 CCDC192P0DO97 292 aa12.59□□□□□ -0.39
MRPL55-213ENST00000366740 SCP2P22307 547 aa12.59□□□□□ -0.39
MRPL55-213ENST00000366740 KCNA4P22459 653 aa12.59□□□□□ -0.39
MRPL55-213ENST00000366740 MPLP40238 635 aa12.59□□□□□ -0.39
MRPL55-213ENST00000366740 PXNP49023 591 aaPredicted RBP12.59□□□□□ -0.39
MRPL55-213ENST00000366740 SMARCB1Q12824 385 aa12.59□□□□□ -0.39
MRPL55-213ENST00000366740 RUNX3Q13761 415 aa12.59□□□□□ -0.39
MRPL55-213ENST00000366740 VEPH1Q14D04 833 aa12.59□□□□□ -0.39
MRPL55-213ENST00000366740 E2F4Q16254 413 aa12.59□□□□□ -0.39
MRPL55-213ENST00000366740 SLC39A12Q504Y0 691 aa12.59□□□□□ -0.39
MRPL55-213ENST00000366740 ZC2HC1CQ53FD0 456 aaPredicted RBP12.59□□□□□ -0.39
MRPL55-213ENST00000366740 C9orf57Q5W0N0 161 aa12.59□□□□□ -0.39
MRPL55-213ENST00000366740 JADE1Q6IE81 842 aa12.59□□□□□ -0.39
MRPL55-213ENST00000366740 SV2BQ7L1I2 683 aa12.59□□□□□ -0.39
MRPL55-213ENST00000366740 SPPL2BQ8TCT7 592 aa12.59□□□□□ -0.39
MRPL55-213ENST00000366740 C2orf15Q8WU43 125 aaKnown RBP12.59□□□□□ -0.39
MRPL55-213ENST00000366740 BICD1Q96G01 975 aa12.59□□□□□ -0.39
MRPL55-213ENST00000366740 GCNAQ96QF7 691 aa12.59□□□□□ -0.39
MRPL55-213ENST00000366740 SEPT5Q99719 369 aaPredicted RBP12.59□□□□□ -0.39
MRPL55-213ENST00000366740 SMG9Q9H0W8 520 aaKnown RBP12.59□□□□□ -0.39
MRPL55-213ENST00000366740 ZHX3Q9H4I2 956 aa12.59□□□□□ -0.39
MRPL55-213ENST00000366740 RPF1Q9H9Y2 349 aaKnown RBP12.59□□□□□ -0.39
MRPL55-213ENST00000366740 KIF9Q9HAQ2 790 aa12.59□□□□□ -0.39
MRPL55-213ENST00000366740 PARVGQ9HBI0 331 aa12.59□□□□□ -0.39
MRPL55-213ENST00000366740 GKN1Q9NS71 199 aa12.59□□□□□ -0.39
MRPL55-213ENST00000366740 CPSF3Q9UKF6 684 aaKnown RBP12.59□□□□□ -0.39
MRPL55-213ENST00000366740 RCOR1Q9UKL0 485 aa12.59□□□□□ -0.39
MRPL55-213ENST00000366740 TBX20Q9UMR3 447 aa12.59□□□□□ -0.39
MRPL55-213ENST00000366740 SLC8A2Q9UPR5 921 aa12.59□□□□□ -0.39
MRPL55-213ENST00000366740 DERAQ9Y315 318 aa12.59□□□□□ -0.39
MRPL55-213ENST00000366740 A0A0B4J269 797 aa12.58□□□□□ -0.4
MRPL55-213ENST00000366740 SOBPA7XYQ1 873 aa12.58□□□□□ -0.4
MRPL55-213ENST00000366740 K7ENM7 598 aa12.58□□□□□ -0.4
MRPL55-213ENST00000366740 HNRNPDLO14979 420 aaKnown RBP12.58□□□□□ -0.4
MRPL55-213ENST00000366740 F11P03951 625 aa12.58□□□□□ -0.4
MRPL55-213ENST00000366740 NFICP08651 508 aa12.58□□□□□ -0.4
MRPL55-213ENST00000366740 DDX6P26196 483 aaKnown RBP eCLIP12.58□□□□□ -0.4
MRPL55-213ENST00000366740 TXLNAP40222 546 aa12.58□□□□□ -0.4
MRPL55-213ENST00000366740 STAT6P42226 847 aa12.58□□□□□ -0.4
MRPL55-213ENST00000366740 LIG4P49917 911 aa12.58□□□□□ -0.4
MRPL55-213ENST00000366740 GTF2BQ00403 316 aa12.58□□□□□ -0.4
MRPL55-213ENST00000366740 GRSF1Q12849 480 aaKnown RBP eCLIP12.58□□□□□ -0.4
MRPL55-213ENST00000366740 MGAT5BQ3V5L5 792 aa12.58□□□□□ -0.4
MRPL55-213ENST00000366740 PLK5Q496M5 336 aa12.58□□□□□ -0.4
MRPL55-213ENST00000366740 SLC39A4Q6P5W5 647 aa12.58□□□□□ -0.4
MRPL55-213ENST00000366740 CCDC73Q6ZRK6 1079 aa12.58□□□□□ -0.4
MRPL55-213ENST00000366740 SFR1Q86XK3 245 aa12.58□□□□□ -0.4
MRPL55-213ENST00000366740 RIN3Q8TB24 985 aa12.58□□□□□ -0.4
MRPL55-213ENST00000366740 USP13Q92995 863 aaPredicted RBP12.58□□□□□ -0.4
MRPL55-213ENST00000366740 STRA6Q9BX79 667 aa12.58□□□□□ -0.4
MRPL55-213ENST00000366740 DUSP15Q9H1R2 295 aaPredicted RBP12.58□□□□□ -0.4
MRPL55-213ENST00000366740 IKZF4Q9H2S9 585 aa12.58□□□□□ -0.4
MRPL55-213ENST00000366740 EBF3Q9H4W6 596 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms