RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 GRAPLQ8TC17 118 aaPredicted RBP17.41■□□□□ 0.38
NID1-202ENST00000366595 CAMKK2Q96RR4 588 aa17.41■□□□□ 0.38
NID1-202ENST00000366595 PACSIN1Q9BY11 444 aa17.41■□□□□ 0.38
NID1-202ENST00000366595 TAGLN3Q9UI15 199 aa17.41■□□□□ 0.38
NID1-202ENST00000366595 SNX13Q9Y5W8 968 aa17.41■□□□□ 0.38
NID1-202ENST00000366595 FAM25AB3EWG3 89 aa17.4■□□□□ 0.38
NID1-202ENST00000366595 FAM25CB3EWG5 89 aa17.4■□□□□ 0.38
NID1-202ENST00000366595 FAM25GB3EWG6 89 aa17.4■□□□□ 0.38
NID1-202ENST00000366595 PSTPIP1O43586 416 aa17.4■□□□□ 0.38
NID1-202ENST00000366595 TARSP26639 723 aaKnown RBP17.4■□□□□ 0.38
NID1-202ENST00000366595 PTPN7P35236 360 aa17.4■□□□□ 0.38
NID1-202ENST00000366595 RXRGP48443 463 aa17.4■□□□□ 0.38
NID1-202ENST00000366595 USP13Q92995 863 aaPredicted RBP17.4■□□□□ 0.38
NID1-202ENST00000366595 RAD54BQ9Y620 910 aa17.4■□□□□ 0.38
NID1-202ENST00000366595 CNTFP26441 200 aa17.4■□□□□ 0.38
NID1-202ENST00000366595 SEC24CP53992 1094 aa17.4■□□□□ 0.38
NID1-202ENST00000366595 DENND1BQ6P3S1 775 aa17.4■□□□□ 0.38
NID1-202ENST00000366595 SH3BP5LQ7L8J4 393 aa17.4■□□□□ 0.38
NID1-202ENST00000366595 ZNF483Q8TF39 744 aaPredicted RBP17.4■□□□□ 0.38
NID1-202ENST00000366595 ANKRD49Q8WVL7 239 aa17.4■□□□□ 0.38
NID1-202ENST00000366595 TMEM117Q9H0C3 514 aa17.4■□□□□ 0.38
NID1-202ENST00000366595 UCHL3P15374 230 aa17.4■□□□□ 0.38
NID1-202ENST00000366595 PTGER2P43116 358 aa17.4■□□□□ 0.38
NID1-202ENST00000366595 PDZK1Q5T2W1 519 aa17.4■□□□□ 0.38
NID1-202ENST00000366595 C12orf60Q5U649 245 aa17.4■□□□□ 0.38
NID1-202ENST00000366595 KRT73Q86Y46 540 aa17.4■□□□□ 0.38
NID1-202ENST00000366595 RDM1Q8NG50 284 aa17.4■□□□□ 0.38
NID1-202ENST00000366595 WDR36Q8NI36 951 aaKnown RBP17.4■□□□□ 0.38
NID1-202ENST00000366595 SPATA18Q8TC71 538 aa17.4■□□□□ 0.38
NID1-202ENST00000366595 DBNDD1Q9H9R9 158 aa17.4■□□□□ 0.38
NID1-202ENST00000366595 BTBD7Q9P203 1132 aa17.4■□□□□ 0.38
NID1-202ENST00000366595 HEY2Q9UBP5 337 aa17.4■□□□□ 0.38
NID1-202ENST00000366595 FMO5P49326 533 aa17.4■□□□□ 0.38
NID1-202ENST00000366595 MTF1Q14872 753 aa17.4■□□□□ 0.38
NID1-202ENST00000366595 CYP51A1Q16850 503 aa17.4■□□□□ 0.38
NID1-202ENST00000366595 MB21D2Q8IYB1 491 aaPredicted RBP17.4■□□□□ 0.38
NID1-202ENST00000366595 LRRC34Q8IZ02 419 aa17.4■□□□□ 0.38
NID1-202ENST00000366595 ADSSL1Q8N142 457 aa17.4■□□□□ 0.38
NID1-202ENST00000366595 SEC31BQ9NQW1 1179 aa17.4■□□□□ 0.38
NID1-202ENST00000366595 PCDHB2Q9Y5E7 798 aa17.4■□□□□ 0.38
NID1-202ENST00000366595 TRIM49D1C9J1S8 452 aa17.39■□□□□ 0.38
NID1-202ENST00000366595 TIMM44O43615 452 aa17.39■□□□□ 0.38
NID1-202ENST00000366595 ABCB1P08183 1280 aaPredicted RBP17.39■□□□□ 0.38
NID1-202ENST00000366595 CRKP46108 304 aa17.39■□□□□ 0.38
NID1-202ENST00000366595 CPA2P48052 419 aa17.39■□□□□ 0.38
NID1-202ENST00000366595 SDE2Q6IQ49 451 aa17.39■□□□□ 0.38
NID1-202ENST00000366595 NAT9Q9BTE0 207 aa17.39■□□□□ 0.38
NID1-202ENST00000366595 PABPC3Q9H361 631 aaKnown RBP17.39■□□□□ 0.38
NID1-202ENST00000366595 RNF146Q9NTX7 359 aa17.39■□□□□ 0.38
NID1-202ENST00000366595 USP17L15C9J2P7 530 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 USP17L13C9JLJ4 530 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 USP17L11C9JVI0 530 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 USP17L18D6R9N7 530 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 USP17L22D6RA61 530 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 USP17L17D6RBQ6 530 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 USP17L19D6RCP7 530 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 USP17L20D6RJB6 530 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 E9PBE3 544 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 USP17L24Q0WX57 530 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 USP17L6PQ6QN14 398 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 LPCAT2Q7L5N7 544 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 YAF2Q8IY57 180 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 OR2W6PQ8NHA6 318 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 SLC10A4Q96EP9 437 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 ZNF333Q96JL9 665 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 C7orf25Q9BPX7 421 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 LBHD1Q9BQE6 289 aaPredicted RBP17.39■□□□□ 0.37
NID1-202ENST00000366595 LY9Q9HBG7 655 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 CD248Q9HCU0 757 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 SLC39A10Q9ULF5 831 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 UTYO14607 1347 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 CAPN1P07384 714 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 COILP38432 576 aaPredicted RBP17.39■□□□□ 0.37
NID1-202ENST00000366595 RPS7P62081 194 aaKnown RBP17.39■□□□□ 0.37
NID1-202ENST00000366595 ALDH6A1Q02252 535 aaKnown RBP17.39■□□□□ 0.37
NID1-202ENST00000366595 WDR72Q3MJ13 1102 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 SHC4Q6S5L8 630 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 CROCCP3Q8IVE0 287 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 CENPTQ96BT3 561 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 TRPC7Q9HCX4 862 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 SF3B1O75533 1304 aaKnown RBP eCLIP17.39■□□□□ 0.37
NID1-202ENST00000366595 ITGAXP20702 1163 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 EIF2B2P49770 351 aaKnown RBP17.39■□□□□ 0.37
NID1-202ENST00000366595 DNAJC3Q13217 504 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 WASHC2DQ5SRD0 308 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 ZBTB49Q6ZSB9 765 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 PPP2R3CQ969Q6 453 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 WWOXQ9NZC7 414 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 VAV3Q9UKW4 847 aa17.39■□□□□ 0.37
NID1-202ENST00000366595 ARIH1Q9Y4X5 557 aaPredicted RBP17.39■□□□□ 0.37
NID1-202ENST00000366595 TPST1O60507 370 aa17.38■□□□□ 0.37
NID1-202ENST00000366595 SNRNP48Q6IEG0 339 aaKnown RBP17.38■□□□□ 0.37
NID1-202ENST00000366595 PI16Q6UXB8 463 aa17.38■□□□□ 0.37
NID1-202ENST00000366595 RTKN2Q8IZC4 609 aa17.38■□□□□ 0.37
NID1-202ENST00000366595 RBBP8NLQ8NC74 664 aaPredicted RBP17.38■□□□□ 0.37
NID1-202ENST00000366595 MYCBPAPQ8TBZ2 947 aa17.38■□□□□ 0.37
NID1-202ENST00000366595 ENKURQ8TC29 256 aa17.38■□□□□ 0.37
NID1-202ENST00000366595 OXER1Q8TDS5 423 aa17.38■□□□□ 0.37
NID1-202ENST00000366595 OSCP1Q8WVF1 389 aa17.38■□□□□ 0.37
NID1-202ENST00000366595 ZNF669Q96BR6 464 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms