RNA–Protein interactions for RNA: ENST00000365287.1

RNU4-11P-201, Transcript of RNA, U4 small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4-11P, Length 132 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-11P-201ENST00000365287 PPP1R12AO14974 1030 aaPredicted RBP1.98□□□□□ -2.09
RNU4-11P-201ENST00000365287 SLC16A3O15427 465 aaKnown RBP1.98□□□□□ -2.09
RNU4-11P-201ENST00000365287 LINC01565O15544 149 aa1.98□□□□□ -2.09
RNU4-11P-201ENST00000365287 TLR5O60602 858 aa1.98□□□□□ -2.09
RNU4-11P-201ENST00000365287 CNOT3O75175 753 aaKnown RBP1.98□□□□□ -2.09
RNU4-11P-201ENST00000365287 CGAP01215 116 aa1.98□□□□□ -2.09
RNU4-11P-201ENST00000365287 ITGALP20701 1170 aa1.98□□□□□ -2.09
RNU4-11P-201ENST00000365287 HOXD9P28356 352 aaPredicted RBP1.98□□□□□ -2.09
RNU4-11P-201ENST00000365287 CD6P30203 668 aa1.98□□□□□ -2.09
RNU4-11P-201ENST00000365287 COLCA1Q6ZS62 124 aa1.98□□□□□ -2.09
RNU4-11P-201ENST00000365287 ZNF329Q86UD4 541 aa1.98□□□□□ -2.09
RNU4-11P-201ENST00000365287 LRRTM3Q86VH5 581 aa1.98□□□□□ -2.09
RNU4-11P-201ENST00000365287 PPM1KQ8N3J5 372 aa1.98□□□□□ -2.09
RNU4-11P-201ENST00000365287 RP9Q8TA86 221 aaKnown RBP1.98□□□□□ -2.09
RNU4-11P-201ENST00000365287 GADD45GIP1Q8TAE8 222 aaPredicted RBP1.98□□□□□ -2.09
RNU4-11P-201ENST00000365287 MPLKIPQ8TAP9 179 aa1.98□□□□□ -2.09
RNU4-11P-201ENST00000365287 FBXO41Q8TF61 875 aa1.98□□□□□ -2.09
RNU4-11P-201ENST00000365287 SIGLEC11Q96RL6 698 aa1.98□□□□□ -2.09
RNU4-11P-201ENST00000365287 TINAGL1Q9GZM7 467 aaPredicted RBP1.98□□□□□ -2.09
RNU4-11P-201ENST00000365287 TOPORSQ9NS56 1045 aaPredicted RBP1.98□□□□□ -2.09
RNU4-11P-201ENST00000365287 HEY2Q9UBP5 337 aa1.98□□□□□ -2.09
RNU4-11P-201ENST00000365287 HS3ST3B1Q9Y662 390 aa1.98□□□□□ -2.09
RNU4-11P-201ENST00000365287 TLR2O60603 784 aa1.97□□□□□ -2.09
RNU4-11P-201ENST00000365287 TJP3O95049 919 aa1.97□□□□□ -2.09
RNU4-11P-201ENST00000365287 A1BGP04217 495 aa1.97□□□□□ -2.09
RNU4-11P-201ENST00000365287 NGFRP08138 427 aa1.97□□□□□ -2.09
RNU4-11P-201ENST00000365287 IL6RP08887 468 aaPredicted RBP1.97□□□□□ -2.09
RNU4-11P-201ENST00000365287 ENGP17813 658 aa1.97□□□□□ -2.09
RNU4-11P-201ENST00000365287 SESN3P58005 492 aa1.97□□□□□ -2.09
RNU4-11P-201ENST00000365287 ID2Q02363 134 aa1.97□□□□□ -2.09
RNU4-11P-201ENST00000365287 SQSTM1Q13501 440 aa1.97□□□□□ -2.09
RNU4-11P-201ENST00000365287 ATP13A4Q4VNC1 1196 aa1.97□□□□□ -2.09
RNU4-11P-201ENST00000365287 KCNK18Q7Z418 384 aa1.97□□□□□ -2.09
RNU4-11P-201ENST00000365287 AHI1Q8N157 1196 aa1.97□□□□□ -2.09
RNU4-11P-201ENST00000365287 SLC17A8Q8NDX2 589 aa1.97□□□□□ -2.09
RNU4-11P-201ENST00000365287 ZNF548Q8NEK5 533 aaPredicted RBP1.97□□□□□ -2.09
RNU4-11P-201ENST00000365287 B4GALNT2Q8NHY0 566 aa1.97□□□□□ -2.09
RNU4-11P-201ENST00000365287 ZNF479Q96JC4 524 aa1.97□□□□□ -2.09
RNU4-11P-201ENST00000365287 ZFYVE19Q96K21 471 aa1.97□□□□□ -2.09
RNU4-11P-201ENST00000365287 SNX18Q96RF0 628 aa1.97□□□□□ -2.09
RNU4-11P-201ENST00000365287 QRSL1Q9H0R6 528 aaKnown RBP1.97□□□□□ -2.09
RNU4-11P-201ENST00000365287 MRPL44Q9H9J2 332 aaKnown RBP1.97□□□□□ -2.09
RNU4-11P-201ENST00000365287 MLXIPQ9HAP2 919 aa1.97□□□□□ -2.09
RNU4-11P-201ENST00000365287 SERHLQ9NQF3 203 aa1.97□□□□□ -2.09
RNU4-11P-201ENST00000365287 A0A087WYN8 130 aa1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 TMEM232C9JQI7 657 aa1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 E9PLN8 166 aa1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 ACOT8O14734 319 aa1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 PLGP00747 810 aaPredicted RBP1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 SBK3P0C264 359 aa1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 THBS4P35443 961 aa1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 LIPAP38571 399 aa1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 CLCN2P51788 898 aa1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 SLC5A3P53794 718 aa1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 ZNF91Q05481 1191 aa1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 DDR1Q08345 913 aa1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 PCBP1Q15365 356 aaKnown RBP eCLIP1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 INPP5JQ15735 1006 aaPredicted RBP1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 FLYWCH1Q4VC44 716 aa1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 TREML2Q5T2D2 321 aa1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 OTUD3Q5T2D3 398 aaPredicted RBP1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 ZNF324BQ6AW86 544 aaPredicted RBP1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 PDXDC1Q6P996 788 aa1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 MTHFD1LQ6UB35 978 aa1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 NR2C2APQ86WQ0 139 aa1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 ANKRD13BQ86YJ7 626 aa1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 ZNF398Q8TD17 642 aa1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 WFIKKN2Q8TEU8 576 aa1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 SCAMP4Q969E2 229 aa1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 LMLNQ96KR4 655 aa1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 VKORC1Q9BQB6 163 aa1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 EFHD1Q9BUP0 239 aa1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 TANGO6Q9C0B7 1094 aa1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 ZBTB40Q9NUA8 1239 aa1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 ETAA1Q9NY74 926 aa1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 MMP24Q9Y5R2 645 aa1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 TTC3P53804 2025 aa1.96□□□□□ -2.1
RNU4-11P-201ENST00000365287 PPM1DO15297 605 aa1.95□□□□□ -2.1
RNU4-11P-201ENST00000365287 GRID2O43424 1007 aa1.95□□□□□ -2.1
RNU4-11P-201ENST00000365287 RNF8O76064 485 aa1.95□□□□□ -2.1
RNU4-11P-201ENST00000365287 ASMTLO95671 621 aa1.95□□□□□ -2.1
RNU4-11P-201ENST00000365287 CHEK2O96017 543 aa1.95□□□□□ -2.1
RNU4-11P-201ENST00000365287 PDHA1P08559 390 aa1.95□□□□□ -2.1
RNU4-11P-201ENST00000365287 FGF3P11487 239 aaPredicted RBP1.95□□□□□ -2.1
RNU4-11P-201ENST00000365287 LPOP22079 712 aaPredicted RBP1.95□□□□□ -2.1
RNU4-11P-201ENST00000365287 RBL2Q08999 1139 aa1.95□□□□□ -2.1
RNU4-11P-201ENST00000365287 SF3B4Q15427 424 aaKnown RBP eCLIP1.95□□□□□ -2.1
RNU4-11P-201ENST00000365287 TBC1D25Q3MII6 688 aa1.95□□□□□ -2.1
RNU4-11P-201ENST00000365287 DALRD3Q5D0E6 543 aaKnown RBP1.95□□□□□ -2.1
RNU4-11P-201ENST00000365287 SOGA3Q5TF21 947 aa1.95□□□□□ -2.1
RNU4-11P-201ENST00000365287 VPS53Q5VIR6 699 aa1.95□□□□□ -2.1
RNU4-11P-201ENST00000365287 SERPINA13PQ6UXR4 307 aa1.95□□□□□ -2.1
RNU4-11P-201ENST00000365287 PARS2Q7L3T8 475 aaKnown RBP1.95□□□□□ -2.1
RNU4-11P-201ENST00000365287 LRRC71Q8N4P6 559 aa1.95□□□□□ -2.1
RNU4-11P-201ENST00000365287 TERB1Q8NA31 727 aa1.95□□□□□ -2.1
RNU4-11P-201ENST00000365287 PSD4Q8NDX1 1056 aa1.95□□□□□ -2.1
RNU4-11P-201ENST00000365287 ABHD11Q8NFV4 315 aa1.95□□□□□ -2.1
RNU4-11P-201ENST00000365287 OR2I1PQ8NGU4 316 aa1.95□□□□□ -2.1
RNU4-11P-201ENST00000365287 C7orf25Q9BPX7 421 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms