RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 SNX19Q92543 992 aa5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 LENG9Q96B70 501 aa5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 MSLNLQ96KJ4 702 aa5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 MYD88Q99836 296 aa5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 MESP1Q9BRJ9 268 aa5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 PCGF6Q9BYE7 350 aa5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 WDR11Q9BZH6 1224 aa5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 UNKQ9C0B0 810 aaKnown RBP5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 ZNF700Q9H0M5 742 aa5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 VPS11Q9H270 941 aa5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 CHST8Q9H2A9 424 aa5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 GJB4Q9NTQ9 266 aa5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 MRPS17Q9Y2R5 130 aaKnown RBP5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 NARSO43776 548 aaKnown RBP5.23□□□□□ -1.57
RNU6-560P-201ENST00000364007 PARP1P09874 1014 aaKnown RBP5.23□□□□□ -1.57
RNU6-560P-201ENST00000364007 ATXN1LP0C7T5 689 aaKnown RBP5.23□□□□□ -1.57
RNU6-560P-201ENST00000364007 IL1R1P14778 569 aa5.23□□□□□ -1.57
RNU6-560P-201ENST00000364007 ITGALP20701 1170 aa5.23□□□□□ -1.57
RNU6-560P-201ENST00000364007 TNFSF4P23510 183 aa5.23□□□□□ -1.57
RNU6-560P-201ENST00000364007 VIPR2P41587 438 aa5.23□□□□□ -1.57
RNU6-560P-201ENST00000364007 STT3AP46977 705 aa5.23□□□□□ -1.57
RNU6-560P-201ENST00000364007 HDAC1Q13547 482 aaPredicted RBP5.23□□□□□ -1.57
RNU6-560P-201ENST00000364007 PUM1Q14671 1186 aaKnown RBP eCLIP5.23□□□□□ -1.57
RNU6-560P-201ENST00000364007 HLXQ14774 488 aaPredicted RBP5.23□□□□□ -1.57
RNU6-560P-201ENST00000364007 PLA1AQ53H76 456 aa5.23□□□□□ -1.57
RNU6-560P-201ENST00000364007 VPS53Q5VIR6 699 aa5.23□□□□□ -1.57
RNU6-560P-201ENST00000364007 KCNV1Q6PIU1 500 aa5.23□□□□□ -1.57
RNU6-560P-201ENST00000364007 TSHZ1Q6ZSZ6 1077 aa5.23□□□□□ -1.57
RNU6-560P-201ENST00000364007 MICALCLQ6ZW33 695 aa5.23□□□□□ -1.57
RNU6-560P-201ENST00000364007 UNC13DQ70J99 1090 aa5.23□□□□□ -1.57
RNU6-560P-201ENST00000364007 COLGALT2Q8IYK4 626 aa5.23□□□□□ -1.57
RNU6-560P-201ENST00000364007 RNF152Q8N8N0 203 aa5.23□□□□□ -1.57
RNU6-560P-201ENST00000364007 TNIP3Q96KP6 325 aa5.23□□□□□ -1.57
RNU6-560P-201ENST00000364007 SNX22Q96L94 193 aa5.23□□□□□ -1.57
RNU6-560P-201ENST00000364007 CCDC138Q96M89 665 aa5.23□□□□□ -1.57
RNU6-560P-201ENST00000364007 RIPOR3Q96MK2 946 aa5.23□□□□□ -1.57
RNU6-560P-201ENST00000364007 MPHOSPH6Q99547 160 aaKnown RBP5.23□□□□□ -1.57
RNU6-560P-201ENST00000364007 ELAC2Q9BQ52 826 aaKnown RBP5.23□□□□□ -1.57
RNU6-560P-201ENST00000364007 AMBRA1Q9C0C7 1298 aa5.23□□□□□ -1.57
RNU6-560P-201ENST00000364007 AS3MTQ9HBK9 375 aa5.23□□□□□ -1.57
RNU6-560P-201ENST00000364007 PNPLA8Q9NP80 782 aa5.23□□□□□ -1.57
RNU6-560P-201ENST00000364007 ITGB1BP2Q9UKP3 347 aa5.23□□□□□ -1.57
RNU6-560P-201ENST00000364007 MYRFQ9Y2G1 1151 aa5.23□□□□□ -1.57
RNU6-560P-201ENST00000364007 SPATA31A3Q5VYP0 1347 aa5.23□□□□□ -1.57
RNU6-560P-201ENST00000364007 COL4A3Q01955 1670 aa5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 TRGV11A0A075B6L2 103 aa5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 A0A0B4J269 797 aa5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 MBD3L4A6NDZ8 208 aaPredicted RBP5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 MBD3L3A6NE82 208 aaPredicted RBP5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 PEX14O75381 377 aa5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 RASSF9O75901 435 aa5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 MT-ND5P03915 603 aa5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 EGR2P11161 476 aaPredicted RBP5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 ITGAMP11215 1152 aa5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 PPP3CBP16298 524 aa5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 TSHRP16473 764 aa5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 PXNP49023 591 aaPredicted RBP5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 WNT3P56703 355 aa5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 TUBB3Q13509 450 aa5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 SF3B3Q15393 1217 aaKnown RBP5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 ZXDCQ2QGD7 858 aaPredicted RBP5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 FAM209BQ5JX69 171 aa5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 RBM20Q5T481 1227 aaKnown RBP5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 ARMC6Q6NXE6 501 aa5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 LAYNQ6UX15 382 aa5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 GGNQ86UU5 652 aa5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 MORC1Q86VD1 984 aa5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 FAM186BQ8IYM0 893 aa5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 CCDC33Q8N5R6 958 aa5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 SPSB4Q96A44 273 aa5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 FUBP1Q96AE4 644 aaKnown RBP5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 PTCD3Q96EY7 689 aaKnown RBP5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 MOGAT1Q96PD6 335 aa5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 BRIP1Q9BX63 1249 aa5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 SERHL2Q9H4I8 314 aa5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 TBC1D23Q9NUY8 699 aa5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 INTS13Q9NVM9 706 aa5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 MID2Q9UJV3 735 aa5.22□□□□□ -1.57
RNU6-560P-201ENST00000364007 PIPSLA2A3N6 862 aa5.21□□□□□ -1.58
RNU6-560P-201ENST00000364007 RASA4BC9J798 803 aa5.21□□□□□ -1.58
RNU6-560P-201ENST00000364007 RASA4O43374 803 aa5.21□□□□□ -1.58
RNU6-560P-201ENST00000364007 SOAT2O75908 522 aa5.21□□□□□ -1.58
RNU6-560P-201ENST00000364007 TXNP10599 105 aaKnown RBP5.21□□□□□ -1.58
RNU6-560P-201ENST00000364007 CYP2C9P11712 490 aa5.21□□□□□ -1.58
RNU6-560P-201ENST00000364007 KLRC1P26715 233 aa5.21□□□□□ -1.58
RNU6-560P-201ENST00000364007 ZEB1P37275 1124 aaPredicted RBP5.21□□□□□ -1.58
RNU6-560P-201ENST00000364007 CARSP49589 748 aaKnown RBP5.21□□□□□ -1.58
RNU6-560P-201ENST00000364007 LOXL3P58215 753 aa5.21□□□□□ -1.58
RNU6-560P-201ENST00000364007 SP2Q02086 613 aa5.21□□□□□ -1.58
RNU6-560P-201ENST00000364007 KRT17Q04695 432 aa5.21□□□□□ -1.58
RNU6-560P-201ENST00000364007 BRD3Q15059 726 aa5.21□□□□□ -1.58
RNU6-560P-201ENST00000364007 LY6G5CQ5SRR4 150 aa5.21□□□□□ -1.58
RNU6-560P-201ENST00000364007 ARHGAP40Q5TG30 622 aa5.21□□□□□ -1.58
RNU6-560P-201ENST00000364007 RRAGBQ5VZM2 374 aa5.21□□□□□ -1.58
RNU6-560P-201ENST00000364007 HIBCHQ6NVY1 386 aaPredicted RBP5.21□□□□□ -1.58
RNU6-560P-201ENST00000364007 KCTD20Q7Z5Y7 419 aa5.21□□□□□ -1.58
RNU6-560P-201ENST00000364007 GAS2L3Q86XJ1 694 aa5.21□□□□□ -1.58
RNU6-560P-201ENST00000364007 VRK3Q8IV63 474 aa5.21□□□□□ -1.58
RNU6-560P-201ENST00000364007 Q8N1X5 172 aa5.21□□□□□ -1.58
RNU6-560P-201ENST00000364007 ATP11CQ8NB49 1132 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms