RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 A1CFQ9NQ94 594 aaKnown RBP3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 SACM1LQ9NTJ5 587 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 KCTD5Q9NXV2 234 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 AFF4Q9UHB7 1163 aaKnown RBP3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 PACSIN3Q9UKS6 424 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 AGAP1Q9UPQ3 857 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 MAST3O60307 1309 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 CCDC78A2IDD5 438 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 MYO1FO00160 1098 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 FOXN1O15353 648 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 YY2O15391 372 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 MPPED1O15442 326 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 PROM1O43490 865 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 INMTO95050 263 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 ESRRBO95718 433 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 GCP02774 474 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 ZKSCAN1P17029 563 aaPredicted RBP3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 KLRC1P26715 233 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 PPIFP30405 207 aaKnown RBP3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 FOLR3P41439 243 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 SLC11A2P49281 568 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 ARFIP2P53365 341 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 SUMO3P55854 103 aaPredicted RBP3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 UCP3P55916 312 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 KRT17Q04695 432 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 IFIT5Q13325 482 aaKnown RBP3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 SEMA5AQ13591 1074 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 PTPRRQ15256 657 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 INSCQ1MX18 579 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 HECTD2Q5U5R9 776 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 VWA1Q6PCB0 445 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 TMEM108Q6UXF1 575 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 Q6YL49 198 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 Q6ZNX1 250 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 TMPRSS9Q7Z410 1059 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 SDR16C5Q8N3Y7 309 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 SLC15A4Q8N697 577 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 DNAJC5GQ8N7S2 189 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 TOR1AIP2Q8NFQ8 470 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 CAGE1Q8TC20 777 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 ATRIPQ8WXE1 791 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 LINC00476Q8WZB0 136 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 FAM136AQ96C01 138 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 FBXL20Q96IG2 436 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 NT5C1BQ96P26 610 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 PPP1R9BQ96SB3 815 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 P2RX7Q99572 595 aaKnown RBP3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 TTPALQ9BTX7 342 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 PTDSS2Q9BVG9 487 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 SARGQ9BW04 601 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 KRTAP9-3Q9BYQ3 159 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 PCED1AQ9H1Q7 454 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 ATP6V0A4Q9HBG4 840 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 PNPLA8Q9NP80 782 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 SERHLQ9NQF3 203 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 DDX21Q9NR30 783 aaKnown RBP eCLIP3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 SNX13Q9Y5W8 968 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 COL4A3Q01955 1670 aa3.29□□□□□ -1.88
RNU6-428P-201ENST00000362942 A0A087WWL8 130 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 A0A087X1B8 175 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 A6NNZ2 444 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 TBX3O15119 743 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 CCP110O43303 1012 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 TLR5O60602 858 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 PQBP1O60828 265 aaKnown RBP3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 NXPH3O95157 252 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 ZFPL1O95159 310 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 TRIM27P14373 513 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 PPP3CBP16298 524 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 CHRM3P20309 590 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 GATA3P23771 443 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 GNALP38405 381 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 SEC24CP53992 1094 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 MRPS35P82673 323 aaKnown RBP3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 MC2RQ01718 297 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 FSTL1Q12841 308 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 KLF10Q13118 480 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 CTBP1Q13363 440 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 COBLL1Q53SF7 1204 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 PLAC9Q5JTB6 97 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 RBM20Q5T481 1227 aaKnown RBP3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 KSR2Q6VAB6 950 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 GAS2L3Q86XJ1 694 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 YAF2Q8IY57 180 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 KRT78Q8N1N4 520 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 SLC44A3Q8N4M1 653 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 FBXO41Q8TF61 875 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 SPSB4Q96A44 273 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 SORCS2Q96PQ0 1159 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 STRBPQ96SI9 672 aaKnown RBP3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 ACTRT3Q9BYD9 372 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 UNKQ9C0B0 810 aaKnown RBP3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 MS4A7Q9GZW8 240 aaPredicted RBP3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 ZCWPW1Q9H0M4 648 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 BHMT2Q9H2M3 363 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 KLC4Q9NSK0 619 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 TRMT13Q9NUP7 481 aaKnown RBP3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 SYBUQ9NX95 663 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 EHD3Q9NZN3 535 aa3.28□□□□□ -1.88
RNU6-428P-201ENST00000362942 USP19O94966 1318 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms