RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 CHN1P15882 459 aa23.87■■□□□ 1.41
LDB1-201ENST00000361198 CPLX4Q7Z7G2 160 aa23.87■■□□□ 1.41
LDB1-201ENST00000361198 KIAA0319LQ8IZA0 1049 aa23.87■■□□□ 1.41
LDB1-201ENST00000361198 OR6J1Q8NGC5 347 aa23.87■■□□□ 1.41
LDB1-201ENST00000361198 ATXN2LQ8WWM7 1075 aaKnown RBP23.87■■□□□ 1.41
LDB1-201ENST00000361198 P3H4Q92791 437 aa23.87■■□□□ 1.41
LDB1-201ENST00000361198 ABHD16BQ9H3Z7 469 aa23.87■■□□□ 1.41
LDB1-201ENST00000361198 ASIC3Q9UHC3 531 aa23.87■■□□□ 1.41
LDB1-201ENST00000361198 PI4K2BG5E9Z4 385 aa23.87■■□□□ 1.41
LDB1-201ENST00000361198 CALCOCO2Q13137 446 aa23.87■■□□□ 1.41
LDB1-201ENST00000361198 TRIP13Q15645 432 aaPredicted RBP23.87■■□□□ 1.41
LDB1-201ENST00000361198 SLC4A11Q8NBS3 891 aa23.87■■□□□ 1.41
LDB1-201ENST00000361198 ATL2Q8NHH9 583 aa23.87■■□□□ 1.41
LDB1-201ENST00000361198 NPLOC4Q8TAT6 608 aa23.87■■□□□ 1.41
LDB1-201ENST00000361198 HOXD8P13378 290 aaPredicted RBP23.86■■□□□ 1.41
LDB1-201ENST00000361198 FGFR4P22455 802 aa23.86■■□□□ 1.41
LDB1-201ENST00000361198 IVDP26440 423 aa23.86■■□□□ 1.41
LDB1-201ENST00000361198 POLR2BP30876 1174 aaKnown RBP23.86■■□□□ 1.41
LDB1-201ENST00000361198 NFX1Q12986 1120 aaKnown RBP23.86■■□□□ 1.41
LDB1-201ENST00000361198 SWT1Q5T5J6 900 aaKnown RBP23.86■■□□□ 1.41
LDB1-201ENST00000361198 PLEKHH3Q7Z736 793 aa23.86■■□□□ 1.41
LDB1-201ENST00000361198 CCDC114Q96M63 670 aa23.86■■□□□ 1.41
LDB1-201ENST00000361198 LHX5Q9H2C1 402 aa23.86■■□□□ 1.41
LDB1-201ENST00000361198 WHRNQ9P202 907 aa23.86■■□□□ 1.41
LDB1-201ENST00000361198 CITO14578 2027 aa23.86■■□□□ 1.41
LDB1-201ENST00000361198 A0A1B0GUA9 196 aa23.86■■□□□ 1.41
LDB1-201ENST00000361198 TLDC2A0PJX2 215 aa23.86■■□□□ 1.41
LDB1-201ENST00000361198 IFI35P80217 286 aaPredicted RBP23.86■■□□□ 1.41
LDB1-201ENST00000361198 PTK6Q13882 451 aa23.86■■□□□ 1.41
LDB1-201ENST00000361198 CCNG2Q16589 344 aa23.86■■□□□ 1.41
LDB1-201ENST00000361198 FAM110CQ1W6H9 321 aa23.86■■□□□ 1.41
LDB1-201ENST00000361198 LACTB2Q53H82 288 aaPredicted RBP23.86■■□□□ 1.41
LDB1-201ENST00000361198 SPRYD7Q5W111 196 aa23.86■■□□□ 1.41
LDB1-201ENST00000361198 TXNRD3NBQ6F5E7 133 aa23.86■■□□□ 1.41
LDB1-201ENST00000361198 SMYD5Q6GMV2 418 aa23.86■■□□□ 1.41
LDB1-201ENST00000361198 GRK7Q8WTQ7 553 aa23.86■■□□□ 1.41
LDB1-201ENST00000361198 PARK7Q99497 189 aaKnown RBP23.86■■□□□ 1.41
LDB1-201ENST00000361198 CCDC134Q9H6E4 229 aa23.86■■□□□ 1.41
LDB1-201ENST00000361198 MED7O43513 233 aa23.85■■□□□ 1.41
LDB1-201ENST00000361198 RASSF9O75901 435 aa23.85■■□□□ 1.41
LDB1-201ENST00000361198 ECM2O94769 699 aaPredicted RBP23.85■■□□□ 1.41
LDB1-201ENST00000361198 TMEM132DQ14C87 1099 aa23.85■■□□□ 1.41
LDB1-201ENST00000361198 DGKDQ16760 1214 aa23.85■■□□□ 1.41
LDB1-201ENST00000361198 ZFYVE27Q5T4F4 411 aa23.85■■□□□ 1.41
LDB1-201ENST00000361198 MFSD5Q6N075 450 aa23.85■■□□□ 1.41
LDB1-201ENST00000361198 FAXDC2Q96IV6 333 aa23.85■■□□□ 1.41
LDB1-201ENST00000361198 ELOVL4Q9GZR5 314 aa23.85■■□□□ 1.41
LDB1-201ENST00000361198 VRTNQ9H8Y1 702 aa23.85■■□□□ 1.41
LDB1-201ENST00000361198 HOMER3Q9NSC5 361 aa23.85■■□□□ 1.41
LDB1-201ENST00000361198 SETD4Q9NVD3 440 aa23.85■■□□□ 1.41
LDB1-201ENST00000361198 DOCK3Q8IZD9 2030 aa23.85■■□□□ 1.41
LDB1-201ENST00000361198 CILPO75339 1184 aa23.85■■□□□ 1.41
LDB1-201ENST00000361198 ITGBL1O95965 494 aaPredicted RBP23.85■■□□□ 1.41
LDB1-201ENST00000361198 GAS8O95995 478 aa23.85■■□□□ 1.41
LDB1-201ENST00000361198 KRT10P13645 584 aa23.85■■□□□ 1.41
LDB1-201ENST00000361198 ATICP31939 592 aa23.85■■□□□ 1.41
LDB1-201ENST00000361198 TAP1Q03518 808 aa23.85■■□□□ 1.41
LDB1-201ENST00000361198 PIGHQ14442 188 aaPredicted RBP23.85■■□□□ 1.41
LDB1-201ENST00000361198 ANKRD20A8PQ5CZ79 823 aa23.85■■□□□ 1.41
LDB1-201ENST00000361198 SYDE1Q6ZW31 735 aaPredicted RBP23.85■■□□□ 1.41
LDB1-201ENST00000361198 RCOR2Q8IZ40 523 aa23.85■■□□□ 1.41
LDB1-201ENST00000361198 SLITRK1Q96PX8 696 aa23.85■■□□□ 1.41
LDB1-201ENST00000361198 ROPN1BQ9BZX4 212 aaPredicted RBP23.85■■□□□ 1.41
LDB1-201ENST00000361198 STMN4Q9H169 189 aaPredicted RBP23.85■■□□□ 1.41
LDB1-201ENST00000361198 ROPN1Q9HAT0 212 aaPredicted RBP23.85■■□□□ 1.41
LDB1-201ENST00000361198 STRIP2Q9ULQ0 834 aa23.85■■□□□ 1.41
LDB1-201ENST00000361198 AGAP1Q9UPQ3 857 aa23.85■■□□□ 1.41
LDB1-201ENST00000361198 TRIP11Q15643 1979 aa23.84■■□□□ 1.41
LDB1-201ENST00000361198 GOLGA8SH3BPF8 625 aa23.84■■□□□ 1.41
LDB1-201ENST00000361198 RFC1P35251 1148 aaPredicted RBP23.84■■□□□ 1.41
LDB1-201ENST00000361198 FKBP1BP68106 108 aa23.84■■□□□ 1.41
LDB1-201ENST00000361198 PTPN11Q06124 597 aaPredicted RBP23.84■■□□□ 1.41
LDB1-201ENST00000361198 KIZQ2M2Z5 673 aa23.84■■□□□ 1.41
LDB1-201ENST00000361198 LRRC38Q5VT99 294 aa23.84■■□□□ 1.41
LDB1-201ENST00000361198 KAZNQ674X7 775 aa23.84■■□□□ 1.41
LDB1-201ENST00000361198 MFSD7Q6UXD7 560 aa23.84■■□□□ 1.41
LDB1-201ENST00000361198 TRMT10CQ7L0Y3 403 aaKnown RBP23.84■■□□□ 1.41
LDB1-201ENST00000361198 CCDC25Q86WR0 208 aa23.84■■□□□ 1.41
LDB1-201ENST00000361198 HPDLQ96IR7 371 aa23.84■■□□□ 1.41
LDB1-201ENST00000361198 ACAP3Q96P50 834 aa23.84■■□□□ 1.41
LDB1-201ENST00000361198 CPXM1Q96SM3 734 aa23.84■■□□□ 1.41
LDB1-201ENST00000361198 NEU2Q9Y3R4 380 aa23.84■■□□□ 1.41
LDB1-201ENST00000361198 DNM1LO00429 736 aa23.84■■□□□ 1.41
LDB1-201ENST00000361198 ITIH2P19823 946 aa23.84■■□□□ 1.41
LDB1-201ENST00000361198 AUHQ13825 339 aaKnown RBP23.84■■□□□ 1.41
LDB1-201ENST00000361198 KYAT1Q16773 422 aa23.84■■□□□ 1.41
LDB1-201ENST00000361198 RHBDF2Q6PJF5 856 aa23.84■■□□□ 1.41
LDB1-201ENST00000361198 PPP1R13LQ8WUF5 828 aa23.84■■□□□ 1.41
LDB1-201ENST00000361198 CCT6BQ92526 530 aa23.84■■□□□ 1.41
LDB1-201ENST00000361198 SNF8Q96H20 258 aa23.84■■□□□ 1.41
LDB1-201ENST00000361198 TMEM176AQ96HP8 235 aa23.84■■□□□ 1.41
LDB1-201ENST00000361198 RBM41Q96IZ5 413 aaKnown RBP23.84■■□□□ 1.41
LDB1-201ENST00000361198 AAASQ9NRG9 546 aa23.84■■□□□ 1.41
LDB1-201ENST00000361198 GOLGA6L7A0A1B0GV03 622 aa23.83■■□□□ 1.41
LDB1-201ENST00000361198 RASGRF2O14827 1237 aa23.83■■□□□ 1.41
LDB1-201ENST00000361198 KRT1P04264 644 aa23.83■■□□□ 1.41
LDB1-201ENST00000361198 TMEM62Q0P6H9 643 aa23.83■■□□□ 1.41
LDB1-201ENST00000361198 SPRED3Q2MJR0 410 aa23.83■■□□□ 1.41
LDB1-201ENST00000361198 IQSEC1Q6DN90 963 aa23.83■■□□□ 1.41
LDB1-201ENST00000361198 NIPA2Q8N8Q9 360 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms