RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 VRTNQ9H8Y1 702 aa13.96□□□□□ -0.17
SQSTM1-201ENST00000360718 GOLGA2P5Q9HBQ8 144 aa13.96□□□□□ -0.17
SQSTM1-201ENST00000360718 AMFRQ9UKV5 643 aa13.96□□□□□ -0.17
SQSTM1-201ENST00000360718 SART1O43290 800 aaKnown RBP13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 NBNO60934 754 aa13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 CPP00450 1065 aa13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 WEE2P0C1S8 567 aa13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 SKIP12755 728 aa13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 CHRNB2P17787 502 aa13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 IBSPP21815 317 aaPredicted RBP13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 RAP1GAPP47736 663 aa13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 CTCFP49711 727 aaPredicted RBP13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 PDCLQ13371 301 aa13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 BFSP2Q13515 415 aa13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 PPP2R5EQ16537 467 aa13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 AGMOQ6ZNB7 445 aa13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 LRRC8DQ7L1W4 858 aa13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 RBBP8NLQ8NC74 664 aaPredicted RBP13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 SDCBP2Q9H190 292 aa13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 CISHQ9NSE2 258 aa13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 CNTN6Q9UQ52 1028 aa13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 STXBP5LQ9Y2K9 1186 aa13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 STAU1O95793 577 aaKnown RBP13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 MYZAPP0CAP1 466 aa13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 CD58P19256 250 aa13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 MLH1P40692 756 aa13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 ATP1A2P50993 1020 aa13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 TRIM60Q495X7 471 aa13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 CEP85LQ5SZL2 805 aa13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 SH2D3CQ8N5H7 860 aa13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 RPS6KC1Q96S38 1066 aa13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 EPN3Q9H201 632 aa13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 MIOSQ9NXC5 875 aa13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 PCDH10Q9P2E7 1040 aa13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 CACNG4Q9UBN1 327 aa13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 ATXN2Q99700 1313 aaKnown RBP13.95□□□□□ -0.18
SQSTM1-201ENST00000360718 GZMAP12544 262 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 SELPP16109 830 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 IGFBP6P24592 240 aaPredicted RBP13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 GNA15P30679 374 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 GJA8P48165 433 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 CDH8P55286 799 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 FAAP100Q0VG06 881 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 TCTN1Q2MV58 587 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 TTC19Q6DKK2 380 aaPredicted RBP13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 MRPL10Q7Z7H8 261 aaKnown RBP13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 TTC39CQ8N584 583 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 CTNNBL1Q8WYA6 563 aaPredicted RBP13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 DDX1Q92499 740 aaKnown RBP13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 RNPC3Q96LT9 517 aaKnown RBP13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 GAD1Q99259 594 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 NAP1L3Q99457 506 aaPredicted RBP13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 TRAIPQ9BWF2 469 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 SMYD3Q9H7B4 428 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 CYP3A43Q9HB55 503 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 TMBIM4Q9HC24 238 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 FAM114A2Q9NRY5 505 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 TAS2R14Q9NYV8 317 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 TTC7AQ9ULT0 858 aaPredicted RBP13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 TANC1Q9C0D5 1861 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 A0A0U1RQF3 1178 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 BHMG1C9JSJ3 638 aaPredicted RBP13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 RTN2O75298 545 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 KIAA0754O94854 1291 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 MMEP08473 750 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 TMEM253P0C7T8 217 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 CYP3A5P20815 502 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 LSP1P33241 339 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 GALCP54803 685 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 TLE2Q04725 743 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 PKN2Q16513 984 aaKnown RBP13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 ANKRD33Q7Z3H0 272 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 NT5DC3Q86UY8 548 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 MICALL1Q8N3F8 863 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 LRRC52Q8N7C0 313 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 PGBD4Q96DM1 585 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 HES6Q96HZ4 224 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 PCDHB18PQ96TA0 734 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 AP1M1Q9BXS5 423 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 BCO2Q9BYV7 579 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 FAM124BQ9H5Z6 455 aaPredicted RBP13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 SLC38A7Q9NVC3 462 aa13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 UTP11Q9Y3A2 253 aaKnown RBP13.94□□□□□ -0.18
SQSTM1-201ENST00000360718 VGLL3A8MV65 326 aa13.93□□□□□ -0.18
SQSTM1-201ENST00000360718 ANKRD65E5RJM6 399 aa13.93□□□□□ -0.18
SQSTM1-201ENST00000360718 ZNF623O75123 536 aa13.93□□□□□ -0.18
SQSTM1-201ENST00000360718 HSD17B3P37058 310 aa13.93□□□□□ -0.18
SQSTM1-201ENST00000360718 MDH1P40925 334 aaKnown RBP13.93□□□□□ -0.18
SQSTM1-201ENST00000360718 FMO1Q01740 532 aa13.93□□□□□ -0.18
SQSTM1-201ENST00000360718 RNF169Q8NCN4 708 aa13.93□□□□□ -0.18
SQSTM1-201ENST00000360718 RFFLQ8WZ73 363 aa13.93□□□□□ -0.18
SQSTM1-201ENST00000360718 ZNF560Q96MR9 790 aa13.93□□□□□ -0.18
SQSTM1-201ENST00000360718 PPP1R10Q96QC0 940 aaKnown RBP13.93□□□□□ -0.18
SQSTM1-201ENST00000360718 WNT8AQ9H1J5 351 aa13.93□□□□□ -0.18
SQSTM1-201ENST00000360718 GIT1Q9Y2X7 761 aa13.93□□□□□ -0.18
SQSTM1-201ENST00000360718 ARL5CA6NH57 179 aa13.93□□□□□ -0.18
SQSTM1-201ENST00000360718 THAP12O43422 761 aa13.93□□□□□ -0.18
SQSTM1-201ENST00000360718 CFHP08603 1231 aa13.93□□□□□ -0.18
SQSTM1-201ENST00000360718 CTNNA1P35221 906 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms