RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 UQCC2Q9BRT2 126 aa10.4□□□□□ -0.74
SIN3A-201ENST00000360439 POLR3FQ9H1D9 316 aaPredicted RBP10.4□□□□□ -0.74
SIN3A-201ENST00000360439 KCND2Q9NZV8 630 aa10.4□□□□□ -0.74
SIN3A-201ENST00000360439 THAP12O43422 761 aa10.4□□□□□ -0.75
SIN3A-201ENST00000360439 RAD51CO43502 376 aa10.4□□□□□ -0.75
SIN3A-201ENST00000360439 SHOX2O60902 331 aaPredicted RBP10.4□□□□□ -0.75
SIN3A-201ENST00000360439 TCF7P36402 384 aaPredicted RBP10.4□□□□□ -0.75
SIN3A-201ENST00000360439 BPIFB4P59827 614 aa10.4□□□□□ -0.75
SIN3A-201ENST00000360439 BLMHQ13867 455 aa10.4□□□□□ -0.75
SIN3A-201ENST00000360439 XKR3Q5GH77 459 aa10.4□□□□□ -0.75
SIN3A-201ENST00000360439 WDR59Q6PJI9 974 aa10.4□□□□□ -0.75
SIN3A-201ENST00000360439 SYDE1Q6ZW31 735 aaPredicted RBP10.4□□□□□ -0.75
SIN3A-201ENST00000360439 SFR1Q86XK3 245 aa10.4□□□□□ -0.75
SIN3A-201ENST00000360439 SEC16BQ96JE7 1060 aa10.4□□□□□ -0.75
SIN3A-201ENST00000360439 WDR18Q9BV38 432 aa10.4□□□□□ -0.75
SIN3A-201ENST00000360439 C2orf49Q9BVC5 232 aaPredicted RBP10.4□□□□□ -0.75
SIN3A-201ENST00000360439 WNT8AQ9H1J5 351 aa10.4□□□□□ -0.75
SIN3A-201ENST00000360439 TUBGCP4Q9UGJ1 667 aa10.4□□□□□ -0.75
SIN3A-201ENST00000360439 KRT8P05787 483 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 FOSL2P15408 326 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 SLCO1A2P46721 670 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 IL9RQ01113 521 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 IER5Q5VY09 327 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 APTXQ7Z2E3 356 aaKnown RBP10.39□□□□□ -0.75
SIN3A-201ENST00000360439 THAP11Q96EK4 314 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 MKNK1Q9BUB5 465 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 C10orf88Q9H8K7 445 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 NXF1Q9UBU9 619 aaKnown RBP10.39□□□□□ -0.75
SIN3A-201ENST00000360439 SIK3Q9Y2K2 1263 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 OCM2P0CE71 109 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 OCMP0CE72 109 aaPredicted RBP10.39□□□□□ -0.75
SIN3A-201ENST00000360439 CCNFP41002 786 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 PIK3CAP42336 1068 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 IST1P53990 364 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 PLTPP55058 493 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 YWHAEP62258 255 aaKnown RBP10.39□□□□□ -0.75
SIN3A-201ENST00000360439 SHROOM1Q2M3G4 852 aaPredicted RBP10.39□□□□□ -0.75
SIN3A-201ENST00000360439 TRIM16LQ309B1 348 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 ZNF568Q3ZCX4 644 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 TMEM119Q4V9L6 283 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 ARMCX2Q7L311 632 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 METTL23Q86XA0 190 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 SYTL5Q8TDW5 730 aaPredicted RBP10.39□□□□□ -0.75
SIN3A-201ENST00000360439 TMEM143Q96AN5 459 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 TXLNGQ9NUQ3 528 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 POLIQ9UNA4 740 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 LAMA4Q16363 1823 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 GLI3P10071 1580 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 IGF2BP3O00425 579 aaKnown RBP eCLIP10.39□□□□□ -0.75
SIN3A-201ENST00000360439 ATP9AO75110 1047 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 ATP6V1E1P36543 226 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 MAGOHP61326 146 aaKnown RBP10.39□□□□□ -0.75
SIN3A-201ENST00000360439 NR1H3Q13133 447 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 RBM20Q5T481 1227 aaKnown RBP10.39□□□□□ -0.75
SIN3A-201ENST00000360439 XRRA1Q6P2D8 792 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 TAS2R42Q7RTR8 314 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 ARHGAP24Q8N264 748 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 MAB21L3Q8N8X9 362 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 CASKIN2Q8WXE0 1202 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 HPS4Q9NQG7 708 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 TOPORSQ9NS56 1045 aaPredicted RBP10.39□□□□□ -0.75
SIN3A-201ENST00000360439 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.39□□□□□ -0.75
SIN3A-201ENST00000360439 AIPL1Q9NZN9 384 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 DNAJC12Q9UKB3 198 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 PIN4Q9Y237 131 aaKnown RBP10.39□□□□□ -0.75
SIN3A-201ENST00000360439 GPC6Q9Y625 555 aaPredicted RBP10.39□□□□□ -0.75
SIN3A-201ENST00000360439 ZC3H4Q9UPT8 1303 aaKnown RBP10.39□□□□□ -0.75
SIN3A-201ENST00000360439 DUOX1Q9NRD9 1551 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 PLCH1Q4KWH8 1693 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 ATP5HO75947 161 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 TMEM253P0C7T8 217 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 UCHL3P15374 230 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 TUBA4AP68366 448 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 STK11Q15831 433 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 WLSQ5T9L3 541 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 MS4A14Q96JA4 679 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 RNPC3Q96LT9 517 aaKnown RBP10.39□□□□□ -0.75
SIN3A-201ENST00000360439 STK33Q9BYT3 514 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 MRPL46Q9H2W6 279 aaKnown RBP10.39□□□□□ -0.75
SIN3A-201ENST00000360439 RETREG1Q9H6L5 497 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 PIDD1Q9HB75 910 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 XPNPEP3Q9NQH7 507 aa10.39□□□□□ -0.75
SIN3A-201ENST00000360439 PHF20L1A8MW92 1017 aa10.38□□□□□ -0.75
SIN3A-201ENST00000360439 PQBP1O60828 265 aaKnown RBP10.38□□□□□ -0.75
SIN3A-201ENST00000360439 NPM3O75607 178 aaKnown RBP10.38□□□□□ -0.75
SIN3A-201ENST00000360439 ZBTB48P10074 688 aaPredicted RBP10.38□□□□□ -0.75
SIN3A-201ENST00000360439 CARSP49589 748 aaKnown RBP10.38□□□□□ -0.75
SIN3A-201ENST00000360439 MIIPQ5JXC2 388 aa10.38□□□□□ -0.75
SIN3A-201ENST00000360439 C4orf32Q8N8J7 132 aa10.38□□□□□ -0.75
SIN3A-201ENST00000360439 MTMR14Q8NCE2 650 aa10.38□□□□□ -0.75
SIN3A-201ENST00000360439 KIAA0895Q8NCT3 520 aa10.38□□□□□ -0.75
SIN3A-201ENST00000360439 AFG1LQ8WV93 481 aa10.38□□□□□ -0.75
SIN3A-201ENST00000360439 ABHD16BQ9H3Z7 469 aa10.38□□□□□ -0.75
SIN3A-201ENST00000360439 EVLQ9UI08 416 aaPredicted RBP10.38□□□□□ -0.75
SIN3A-201ENST00000360439 REXO2Q9Y3B8 237 aaKnown RBP10.38□□□□□ -0.75
SIN3A-201ENST00000360439 ESYT3A0FGR9 886 aa10.38□□□□□ -0.75
SIN3A-201ENST00000360439 AOC2O75106 756 aa10.38□□□□□ -0.75
SIN3A-201ENST00000360439 EYA4O95677 639 aa10.38□□□□□ -0.75
SIN3A-201ENST00000360439 SNX16P57768 344 aa10.38□□□□□ -0.75
SIN3A-201ENST00000360439 KLHDC7AQ5VTJ3 777 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms