RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 PDIA6Q15084 440 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 ATF7IP2Q5U623 682 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 MRPS31Q92665 395 aaKnown RBP10.07□□□□□ -0.8
CUX1-203ENST00000360264 RBM15Q96T37 977 aaKnown RBP eCLIP10.07□□□□□ -0.81e-11■■■■□ 20.4
CUX1-203ENST00000360264 UBXN6Q9BZV1 441 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 TASP1Q9H6P5 420 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 ZMYM2Q9UBW7 1377 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 PSMD12O00232 456 aaPredicted RBP10.07□□□□□ -0.8
CUX1-203ENST00000360264 PSMD14O00487 310 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 ALBP02768 609 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 FDFT1P37268 417 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 SAMD3Q8N6K7 520 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 ZNF512BQ96KM6 892 aaPredicted RBP10.07□□□□□ -0.8
CUX1-203ENST00000360264 MCCC1Q96RQ3 725 aaPredicted RBP10.07□□□□□ -0.8
CUX1-203ENST00000360264 SPASTQ9UBP0 616 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 NMT2O60551 498 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 GTF2H1P32780 548 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 TTC39BQ5VTQ0 682 aaPredicted RBP10.07□□□□□ -0.8
CUX1-203ENST00000360264 FAM47EQ6ZV65 393 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 GLT1D1Q96MS3 346 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 TRIM9Q9C026 710 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 ILKAPQ9H0C8 392 aaPredicted RBP10.07□□□□□ -0.8
CUX1-203ENST00000360264 LZTS3O60299 673 aaPredicted RBP10.07□□□□□ -0.8
CUX1-203ENST00000360264 FGFR4P22455 802 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 DCDC2Q9UHG0 476 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 FHOD1Q9Y613 1164 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 F5H5T6 163 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 ADCY3O60266 1144 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 CCNJLQ8IV13 435 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 SOX13Q9UN79 622 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 CDC42BPAQ5VT25 1732 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 H0YC42 278 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 CYB5R4Q7L1T6 521 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 C11orf96Q7Z7L8 435 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 FAM167BQ9BTA0 163 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 CYP2C8P10632 490 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 TSGA10IPQ3SY00 556 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 WDR48Q8TAF3 677 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 CASP10Q92851 521 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 NEU2Q9Y3R4 380 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 SRP72O76094 671 aaKnown RBP10.06□□□□□ -0.8
CUX1-203ENST00000360264 SNRPAP09012 282 aaKnown RBP10.06□□□□□ -0.8
CUX1-203ENST00000360264 PLA2G4FQ68DD2 849 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 SRLQ86TD4 932 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 TFB1MQ8WVM0 346 aaKnown RBP10.06□□□□□ -0.8
CUX1-203ENST00000360264 NSL1Q96IY1 281 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 TNS3Q68CZ2 1445 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 ATXN3P54252 364 aaPredicted RBP10.06□□□□□ -0.8
CUX1-203ENST00000360264 PTK7Q13308 1070 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 COLEC11Q9BWP8 271 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 RANBP17Q9H2T7 1088 aaKnown RBP10.06□□□□□ -0.8
CUX1-203ENST00000360264 PDHA1P08559 390 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 ST13P5Q8NFI4 369 aaPredicted RBP10.06□□□□□ -0.8
CUX1-203ENST00000360264 DMAP1Q9NPF5 467 aaPredicted RBP10.06□□□□□ -0.8
CUX1-203ENST00000360264 UBQLN1Q9UMX0 589 aaKnown RBP10.06□□□□□ -0.8
CUX1-203ENST00000360264 SYNCRIPO60506 623 aaKnown RBP10.06□□□□□ -0.8
CUX1-203ENST00000360264 USP1O94782 785 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 CHI3L1P36222 383 aaPredicted RBP10.06□□□□□ -0.8
CUX1-203ENST00000360264 FMO5P49326 533 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 PTPAQ15257 358 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 ZNF746Q6NUN9 644 aaPredicted RBP10.06□□□□□ -0.8
CUX1-203ENST00000360264 AGBL3Q8NEM8 1001 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 ARMC2Q8NEN0 867 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 SKA1Q96BD8 255 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 KPNA6O60684 536 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 PRKCEQ02156 737 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 KANSL3Q9P2N6 904 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 SLCO1B7G3V0H7 640 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 ZNF200P98182 395 aaPredicted RBP10.06□□□□□ -0.8
CUX1-203ENST00000360264 CAPRIN2Q6IMN6 1127 aaKnown RBP10.06□□□□□ -0.8
CUX1-203ENST00000360264 HDDC2Q7Z4H3 204 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 ZNF507Q8TCN5 953 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 MOV10L1Q9BXT6 1211 aaKnown RBP10.06□□□□□ -0.8
CUX1-203ENST00000360264 CTNNAL1Q9UBT7 734 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 ITSN1Q15811 1721 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 TRIM49BA6NDI0 452 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 CRTAMO95727 393 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 PPP2R1BP30154 601 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 CCT8P50990 548 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 PDK2Q15119 407 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 ZNF333Q96JL9 665 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 TRIM49P0CI25 452 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 TRIM49CP0CI26 452 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 SLC16A1P53985 500 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 SESN2P58004 480 aaPredicted RBP10.06□□□□□ -0.8
CUX1-203ENST00000360264 NLRP9Q7RTR0 991 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 CRAMP1Q96RY5 1269 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 ECSITQ9BQ95 431 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 CARD9Q9H257 536 aa10.06□□□□□ -0.8
CUX1-203ENST00000360264 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.06□□□□□ -0.8
CUX1-203ENST00000360264 CNOT7Q9UIV1 285 aaKnown RBP10.06□□□□□ -0.8
CUX1-203ENST00000360264 PREX2Q70Z35 1606 aa10.05□□□□□ -0.8
CUX1-203ENST00000360264 SUGP1Q8IWZ8 645 aaKnown RBP10.05□□□□□ -0.8
CUX1-203ENST00000360264 SH3GL2Q99962 352 aa10.05□□□□□ -0.8
CUX1-203ENST00000360264 VIPAS39Q9H9C1 493 aa10.05□□□□□ -0.8
CUX1-203ENST00000360264 USP15Q9Y4E8 981 aaPredicted RBP10.05□□□□□ -0.8
CUX1-203ENST00000360264 RAD54BQ9Y620 910 aa10.05□□□□□ -0.8
CUX1-203ENST00000360264 CPDO75976 1380 aa10.05□□□□□ -0.8
CUX1-203ENST00000360264 RHOBTB3O94955 611 aa10.05□□□□□ -0.8
CUX1-203ENST00000360264 PGK2P07205 417 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms