RNA–Protein interactions for RNA: ENST00000360218.2

CTSE-202, Transcript of cathepsin E, humanhuman

TSL 1 (best) BASIC

Gene CTSE, Length 2,071 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSE-202ENST00000360218 CFAP58Q5T655 872 aa11.73□□□□□ -0.53
CTSE-202ENST00000360218 MFSD14CQ5VZR4 134 aa11.73□□□□□ -0.53
CTSE-202ENST00000360218 C9orf57Q5W0N0 161 aa11.73□□□□□ -0.53
CTSE-202ENST00000360218 ALS2CLQ60I27 953 aa11.73□□□□□ -0.53
CTSE-202ENST00000360218 TXNRD3NBQ6F5E7 133 aa11.73□□□□□ -0.53
CTSE-202ENST00000360218 FAM228AQ86W67 206 aa11.73□□□□□ -0.53
CTSE-202ENST00000360218 CCDC105Q8IYK2 499 aa11.73□□□□□ -0.53
CTSE-202ENST00000360218 RNF25Q96BH1 459 aaPredicted RBP11.73□□□□□ -0.53
CTSE-202ENST00000360218 ACSF2Q96CM8 615 aaPredicted RBP11.73□□□□□ -0.53
CTSE-202ENST00000360218 MTG1Q9BT17 334 aaPredicted RBP11.73□□□□□ -0.53
CTSE-202ENST00000360218 LRRC19Q9H756 370 aa11.73□□□□□ -0.53
CTSE-202ENST00000360218 METTL5Q9NRN9 209 aaKnown RBP11.73□□□□□ -0.53
CTSE-202ENST00000360218 PARP2Q9UGN5 583 aa11.73□□□□□ -0.53
CTSE-202ENST00000360218 STRIP2Q9ULQ0 834 aa11.73□□□□□ -0.53
CTSE-202ENST00000360218 R3HDM2Q9Y2K5 976 aaKnown RBP11.73□□□□□ -0.53
CTSE-202ENST00000360218 CENPFP49454 3210 aa11.73□□□□□ -0.53
CTSE-202ENST00000360218 KRT1P04264 644 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 GPD2P43304 727 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 RPL21P46778 160 aaKnown RBP11.72□□□□□ -0.53
CTSE-202ENST00000360218 FNTAP49354 379 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 PRKCZQ05513 592 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 PDCLQ13371 301 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 UAP1Q16222 522 aaPredicted RBP11.72□□□□□ -0.53
CTSE-202ENST00000360218 GOLGA7BQ2TAP0 167 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 NBPF20Q3BBV1 942 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 GDF6Q6KF10 455 aaPredicted RBP11.72□□□□□ -0.53
CTSE-202ENST00000360218 ZDHHC24Q6UX98 284 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 SESTD1Q86VW0 696 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 IQCKQ8N0W5 287 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 C12orf29Q8N999 325 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 SMG8Q8ND04 991 aaKnown RBP11.72□□□□□ -0.53
CTSE-202ENST00000360218 EXD1Q8NHP7 514 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 WNT8BQ93098 351 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 RUFY1Q96T51 708 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 SH3GL2Q99962 352 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 NT5C1AQ9BXI3 368 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 DCLK3Q9C098 648 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 SYNCQ9H7C4 482 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 GOLGA2P5Q9HBQ8 144 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 ZDHHC18Q9NUE0 388 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 GRHL1Q9NZI5 618 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 TSPAN16Q9UKR8 245 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 IPPQ9Y573 584 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 CASP8AP2Q9UKL3 1982 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 SMIM28A0A1B0GU29 152 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 PIK3R2O00459 728 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 HCRTO43612 131 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 PSMA2P25787 234 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 HSD17B3P37058 310 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 KLF1Q13351 362 aaPredicted RBP11.72□□□□□ -0.53
CTSE-202ENST00000360218 ACOT1Q86TX2 421 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 NME8Q8N427 588 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 EMC1Q8N766 993 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 LRRC52Q8N7C0 313 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 ARRDC4Q8NCT1 418 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 MAIP1Q8WWC4 291 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 FAM118BQ9BPY3 351 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 LPIN3Q9BQK8 851 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 OSBPL8Q9BZF1 889 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 UPF3AQ9H1J1 476 aaKnown RBP11.72□□□□□ -0.53
CTSE-202ENST00000360218 FAM204AQ9H8W3 233 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 GTF2IRD1Q9UHL9 959 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 ADAM21Q9UKJ8 722 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 UBQLN1Q9UMX0 589 aaKnown RBP11.72□□□□□ -0.53
CTSE-202ENST00000360218 CDY2AQ9Y6F7 541 aa11.72□□□□□ -0.53
CTSE-202ENST00000360218 SIGLEC16A6NMB1 481 aa11.71□□□□□ -0.53
CTSE-202ENST00000360218 HMGCRP04035 888 aa11.71□□□□□ -0.53
CTSE-202ENST00000360218 PFKMP08237 780 aa11.71□□□□□ -0.53
CTSE-202ENST00000360218 CTSHP09668 335 aa11.71□□□□□ -0.53
CTSE-202ENST00000360218 KRT3P12035 628 aa11.71□□□□□ -0.53
CTSE-202ENST00000360218 GSCP56915 257 aaPredicted RBP11.71□□□□□ -0.53
CTSE-202ENST00000360218 MRPS6P82932 125 aaKnown RBP11.71□□□□□ -0.53
CTSE-202ENST00000360218 SOX4Q06945 474 aaPredicted RBP11.71□□□□□ -0.53
CTSE-202ENST00000360218 PIGHQ14442 188 aaPredicted RBP11.71□□□□□ -0.53
CTSE-202ENST00000360218 ZFYVE27Q5T4F4 411 aa11.71□□□□□ -0.53
CTSE-202ENST00000360218 TMC3Q7Z5M5 1100 aa11.71□□□□□ -0.53
CTSE-202ENST00000360218 NIPA2Q8N8Q9 360 aa11.71□□□□□ -0.53
CTSE-202ENST00000360218 ARL8AQ96BM9 186 aa11.71□□□□□ -0.53
CTSE-202ENST00000360218 RUNDC3BQ96NL0 473 aa11.71□□□□□ -0.53
CTSE-202ENST00000360218 SLITRK1Q96PX8 696 aa11.71□□□□□ -0.53
CTSE-202ENST00000360218 FMO2Q99518 471 aa11.71□□□□□ -0.53
CTSE-202ENST00000360218 PLAAQ9Y263 795 aa11.71□□□□□ -0.53
CTSE-202ENST00000360218 PODXLO00592 558 aa11.71□□□□□ -0.54
CTSE-202ENST00000360218 SPTLC1O15269 473 aa11.71□□□□□ -0.54
CTSE-202ENST00000360218 KPNA6O60684 536 aa11.71□□□□□ -0.54
CTSE-202ENST00000360218 ECEL1O95672 775 aa11.71□□□□□ -0.54
CTSE-202ENST00000360218 KRT14P02533 472 aa11.71□□□□□ -0.54
CTSE-202ENST00000360218 KRT10P13645 584 aa11.71□□□□□ -0.54
CTSE-202ENST00000360218 CCND3P30281 292 aaPredicted RBP11.71□□□□□ -0.54
CTSE-202ENST00000360218 GABRB2P47870 512 aa11.71□□□□□ -0.54
CTSE-202ENST00000360218 PLTPP55058 493 aa11.71□□□□□ -0.54
CTSE-202ENST00000360218 KRT17Q04695 432 aa11.71□□□□□ -0.54
CTSE-202ENST00000360218 CACNB2Q08289 660 aaPredicted RBP11.71□□□□□ -0.54
CTSE-202ENST00000360218 ADCY2Q08462 1091 aa11.71□□□□□ -0.54
CTSE-202ENST00000360218 NFX1Q12986 1120 aaKnown RBP11.71□□□□□ -0.54
CTSE-202ENST00000360218 ZNF268Q14587 947 aaPredicted RBP11.71□□□□□ -0.54
CTSE-202ENST00000360218 SOWAHAQ2M3V2 549 aa11.71□□□□□ -0.54
CTSE-202ENST00000360218 TTMPQ5BVD1 217 aa11.71□□□□□ -0.54
CTSE-202ENST00000360218 XKR4Q5GH76 650 aa11.71□□□□□ -0.54
CTSE-202ENST00000360218 FAM47CQ5HY64 1035 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms