RNA–Protein interactions for RNA: ENST00000359446.9

LDLRAD4-201, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,486 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-201ENST00000359446 CCDC81Q6ZN84 652 aa13.25□□□□□ -0.29
LDLRAD4-201ENST00000359446 BRINP3Q76B58 766 aa13.25□□□□□ -0.29
LDLRAD4-201ENST00000359446 RNF180Q86T96 592 aa13.25□□□□□ -0.29
LDLRAD4-201ENST00000359446 USP13Q92995 863 aaPredicted RBP13.25□□□□□ -0.29
LDLRAD4-201ENST00000359446 NMRK2Q9NPI5 230 aa13.25□□□□□ -0.29
LDLRAD4-201ENST00000359446 USP15Q9Y4E8 981 aaPredicted RBP13.25□□□□□ -0.29
LDLRAD4-201ENST00000359446 PRDM15P57071 1507 aaPredicted RBP13.25□□□□□ -0.29
LDLRAD4-201ENST00000359446 H2AFYO75367 372 aaKnown RBP13.25□□□□□ -0.29
LDLRAD4-201ENST00000359446 C9orf72Q96LT7 481 aa13.25□□□□□ -0.29
LDLRAD4-201ENST00000359446 PI4K2AQ9BTU6 479 aa13.25□□□□□ -0.29
LDLRAD4-201ENST00000359446 TMEM8AQ9HCN3 771 aa13.25□□□□□ -0.29
LDLRAD4-201ENST00000359446 VPS9D1Q9Y2B5 631 aa13.25□□□□□ -0.29
LDLRAD4-201ENST00000359446 M0R3G1 203 aa13.25□□□□□ -0.29
LDLRAD4-201ENST00000359446 ATMINO43313 823 aaPredicted RBP13.25□□□□□ -0.29
LDLRAD4-201ENST00000359446 TTLL9Q3SXZ7 439 aa13.25□□□□□ -0.29
LDLRAD4-201ENST00000359446 ANKS6Q68DC2 871 aa13.25□□□□□ -0.29
LDLRAD4-201ENST00000359446 RNF112Q9ULX5 631 aa13.25□□□□□ -0.29
LDLRAD4-201ENST00000359446 USP27XA6NNY8 438 aa13.25□□□□□ -0.29
LDLRAD4-201ENST00000359446 DEFA1P59665 94 aa13.25□□□□□ -0.29
LDLRAD4-201ENST00000359446 DEFA3P59666 94 aa13.25□□□□□ -0.29
LDLRAD4-201ENST00000359446 CNTN1Q12860 1018 aa13.25□□□□□ -0.29
LDLRAD4-201ENST00000359446 ALFQ53S48 1182 aa13.25□□□□□ -0.29
LDLRAD4-201ENST00000359446 GFM2Q969S9 779 aaKnown RBP13.25□□□□□ -0.29
LDLRAD4-201ENST00000359446 MTA3Q9BTC8 594 aa13.25□□□□□ -0.29
LDLRAD4-201ENST00000359446 DMAP1Q9NPF5 467 aaPredicted RBP13.25□□□□□ -0.29
LDLRAD4-201ENST00000359446 GTF2A1LQ9UNN4 478 aa13.25□□□□□ -0.29
LDLRAD4-201ENST00000359446 MTSS1O43312 755 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 EXTL3O43909 919 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 NDUFB10O96000 172 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 GTF2H1P32780 548 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 SCARF1Q14162 830 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 ZC2HC1CQ53FD0 456 aaPredicted RBP13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 BLOC1S5Q8TDH9 187 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 DEPDC7Q96QD5 511 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 APPL1Q9UKG1 709 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 ASS1P00966 412 aaKnown RBP13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 PTGER2P43116 358 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 LRRC71Q8N4P6 559 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 GPRC5AQ8NFJ5 357 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 PNKPQ96T60 521 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 SREBF2Q12772 1141 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 MROH9Q5TGP6 573 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 SGMS1Q86VZ5 419 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 USP6NLQ92738 828 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 OSBPL8Q9BZF1 889 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 CCDC134Q9H6E4 229 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 SCUBE2Q9NQ36 999 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 PAPOLBQ9NRJ5 636 aaKnown RBP13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 GRID1Q9ULK0 1009 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 HMGB3O15347 200 aaKnown RBP13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 SNRPAP09012 282 aaKnown RBP13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 AVPR1AP37288 418 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 MDH1P40925 334 aaKnown RBP13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 RANBP1P43487 201 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 TRAF7Q6Q0C0 670 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 FAM71DQ8N9W8 422 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 C1orf131Q8NDD1 294 aaKnown RBP13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 BBS2Q9BXC9 721 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 MOV10L1Q9BXT6 1211 aaKnown RBP13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 KCTD10Q9H3F6 313 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 ZNF177Q13360 481 aaPredicted RBP13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 SF3B3Q15393 1217 aaKnown RBP13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 GALNTL6Q49A17 601 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 NSUN4Q96CB9 384 aaKnown RBP13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 RBBP8Q99708 897 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 DYRK3O43781 588 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 SPAG6O75602 509 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 TGM2P21980 687 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 NFIXQ14938 502 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 OTOAQ7RTW8 1153 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 SLC44A2Q8IWA5 706 aaPredicted RBP13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 ZNF614Q8N883 585 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 GTF3C2Q8WUA4 911 aaPredicted RBP13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 IL17RAQ96F46 866 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 THUMPD3Q9BV44 507 aaKnown RBP13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 ZCCHC17Q9NP64 241 aaKnown RBP13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 TBC1D23Q9NUY8 699 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 PRMT7Q9NVM4 692 aaPredicted RBP13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 PCDHB2Q9Y5E7 798 aa13.24□□□□□ -0.29
LDLRAD4-201ENST00000359446 CCL15-CCL14A0A0B4J2E2 113 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 ITGB3P05106 788 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 THPOP40225 353 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 CCL15Q16663 113 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 TKFCQ3LXA3 575 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 CCDC144BQ3MJ40 725 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 TMEM169Q96HH4 297 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 C7orf25Q9BPX7 421 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 PRG3Q9Y2Y8 225 aaPredicted RBP13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 VWA5AO00534 786 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 HLA-DRAP01903 254 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 SLC11A2P49281 568 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 FUT11Q495W5 492 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 WDR24Q96S15 920 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 CCSER1Q9C0I3 900 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 MTO1Q9Y2Z2 717 aaKnown RBP13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 RGS5O15539 181 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 SOAT2O75908 522 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 ALBP02768 609 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 HPGDP15428 266 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms