RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 DRG1Q9Y295 367 aaKnown RBP9.05□□□□□ -0.96
RFX3-202ENST00000358730 WDR90Q96KV7 1748 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 OGTO15294 1046 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 PRPF4O43172 522 aaKnown RBP eCLIP9.04□□□□□ -0.96
RFX3-202ENST00000358730 PRKCBP05771 671 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 CD19P15391 556 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 CA4P22748 312 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 LACTBP83111 547 aaPredicted RBP9.04□□□□□ -0.96
RFX3-202ENST00000358730 GRM1Q13255 1194 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 RIPK1Q13546 671 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 RNF43Q68DV7 783 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 WDTC1Q8N5D0 677 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 NIPA2Q8N8Q9 360 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 RNF149Q8NC42 400 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 FBF1Q8TES7 1133 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 SENP1Q9P0U3 644 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 SAE1Q9UBE0 346 aaPredicted RBP9.04□□□□□ -0.96
RFX3-202ENST00000358730 STRIP2Q9ULQ0 834 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 STK38LQ9Y2H1 464 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 NDC80O14777 642 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 MAFO75444 373 aaPredicted RBP9.04□□□□□ -0.96
RFX3-202ENST00000358730 KRT16P08779 473 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 EIF4BP23588 611 aaKnown RBP9.04□□□□□ -0.96
RFX3-202ENST00000358730 ASPAP45381 313 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 CTCFP49711 727 aaPredicted RBP9.04□□□□□ -0.96
RFX3-202ENST00000358730 OSTNP61366 133 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 OTUD4Q01804 1114 aaKnown RBP9.04□□□□□ -0.96
RFX3-202ENST00000358730 ACVR2BQ13705 512 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 ZNF268Q14587 947 aaPredicted RBP9.04□□□□□ -0.96
RFX3-202ENST00000358730 MAPK6Q16659 721 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 PTPN20Q4JDL3 420 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 KCNT1Q5JUK3 1230 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 DENND1BQ6P3S1 775 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 EEPD1Q7L9B9 569 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 ZBTB8OSQ8IWT0 167 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 LRRC71Q8N4P6 559 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 TAB3Q8N5C8 712 aaPredicted RBP9.04□□□□□ -0.96
RFX3-202ENST00000358730 CHST13Q8NET6 341 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 ACTL9Q8TC94 416 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 ACO2Q99798 780 aaKnown RBP9.04□□□□□ -0.96
RFX3-202ENST00000358730 PSMC3IPQ9P2W1 217 aaPredicted RBP9.04□□□□□ -0.96
RFX3-202ENST00000358730 NXF1Q9UBU9 619 aaKnown RBP9.04□□□□□ -0.96
RFX3-202ENST00000358730 TJP2Q9UDY2 1190 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 PCDHGC3Q9UN70 934 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 TRIM33Q9UPN9 1127 aa9.04□□□□□ -0.96
RFX3-202ENST00000358730 SMG5Q9UPR3 1016 aaKnown RBP9.04□□□□□ -0.96
RFX3-202ENST00000358730 MGAMO43451 1857 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 ALOX15BO15296 676 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 CDH5P33151 784 aaPredicted RBP9.03□□□□□ -0.96
RFX3-202ENST00000358730 RPA3P35244 121 aaPredicted RBP9.03□□□□□ -0.96
RFX3-202ENST00000358730 RFC1P35251 1148 aaPredicted RBP9.03□□□□□ -0.96
RFX3-202ENST00000358730 RAP1GAPP47736 663 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 GDF10P55107 478 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 SLC25A11Q02978 314 aaKnown RBP9.03□□□□□ -0.96
RFX3-202ENST00000358730 GAD2Q05329 585 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 LAMTOR4Q0VGL1 99 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 PRKG1Q13976 671 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 TMEM132AQ24JP5 1023 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 POLNQ7Z5Q5 900 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 TRIM50Q86XT4 487 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 APOBEC3FQ8IUX4 373 aaKnown RBP9.03□□□□□ -0.96
RFX3-202ENST00000358730 THNSL1Q8IYQ7 743 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 ANKLE1Q8NAG6 615 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 JOSD2Q8TAC2 188 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 SLC35B2Q8TB61 432 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 KLRG1Q96E93 195 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 TACO1Q9BSH4 297 aaKnown RBP9.03□□□□□ -0.96
RFX3-202ENST00000358730 C10orf88Q9H8K7 445 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 SLCO1B3Q9NPD5 702 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 PHTF1Q9UMS5 762 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 AFG3L2Q9Y4W6 797 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 ANK1P16157 1881 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 C3orf70A6NLC5 250 aaPredicted RBP9.03□□□□□ -0.96
RFX3-202ENST00000358730 A8MUI8 341 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 CST8O60676 142 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 LRCH4O75427 683 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 KRT19P08727 400 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 HOXC6P09630 235 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 KRT3P12035 628 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 POLR2BP30876 1174 aaKnown RBP9.03□□□□□ -0.96
RFX3-202ENST00000358730 MTM1Q13496 603 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 EFTUD2Q15029 972 aaKnown RBP eCLIP9.03□□□□□ -0.96
RFX3-202ENST00000358730 SURF1Q15526 300 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 CDCA2Q69YH5 1023 aaPredicted RBP9.03□□□□□ -0.96
RFX3-202ENST00000358730 LRRC8CQ8TDW0 803 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 DENND1AQ8TEH3 1009 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 ERP27Q96DN0 273 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 STAMBPL1Q96FJ0 436 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 ZNF668Q96K58 619 aaPredicted RBP9.03□□□□□ -0.96
RFX3-202ENST00000358730 SYNCQ9H7C4 482 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 ARHGEF3Q9NR81 526 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 SLC24A2Q9UI40 661 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 CPSF3Q9UKF6 684 aaKnown RBP9.03□□□□□ -0.96
RFX3-202ENST00000358730 GRID1Q9ULK0 1009 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 POLIQ9UNA4 740 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 STARD13Q9Y3M8 1113 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 FARP1Q9Y4F1 1045 aaPredicted RBP9.03□□□□□ -0.96
RFX3-202ENST00000358730 CLUHO75153 1309 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 SSC5DA1L4H1 1573 aa9.03□□□□□ -0.96
RFX3-202ENST00000358730 TNNC2P02585 160 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms