RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 CALB1P05937 261 aa18.08■□□□□ 0.48
TPM1-205ENST00000357980 PFKMP08237 780 aa18.08■□□□□ 0.48
TPM1-205ENST00000357980 PRLRP16471 622 aa18.08■□□□□ 0.48
TPM1-205ENST00000357980 ITGB8P26012 769 aa18.08■□□□□ 0.48
TPM1-205ENST00000357980 PTPN20Q4JDL3 420 aa18.08■□□□□ 0.48
TPM1-205ENST00000357980 LIN9Q5TKA1 542 aa18.08■□□□□ 0.48
TPM1-205ENST00000357980 PLEKHA7Q6IQ23 1121 aa18.08■□□□□ 0.48
TPM1-205ENST00000357980 DCLRE1AQ6PJP8 1040 aa18.08■□□□□ 0.48
TPM1-205ENST00000357980 UBE2Q1Q7Z7E8 422 aa18.08■□□□□ 0.48
TPM1-205ENST00000357980 MYRIPQ8NFW9 859 aa18.08■□□□□ 0.48
TPM1-205ENST00000357980 FAM49BQ9NUQ9 324 aa18.08■□□□□ 0.48
TPM1-205ENST00000357980 TCRBV5S1A1TA0A578 114 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 TRIM43BA6NCK2 446 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 F8W810 466 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 M0QZQ0 153 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 KIAA0355O15063 1070 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 TERF1P54274 439 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 GOLGA7BQ2TAP0 167 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 PAN2Q504Q3 1202 aaKnown RBP18.07■□□□□ 0.48
TPM1-205ENST00000357980 CNKSR3Q6P9H4 555 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 DSTYKQ6XUX3 929 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 NT5DC3Q86UY8 548 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 ERICH1Q86X53 443 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 B3GALNT2Q8NCR0 500 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 TRIM43Q96BQ3 446 aaPredicted RBP18.07■□□□□ 0.48
TPM1-205ENST00000357980 TNIP3Q96KP6 325 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 LPIN3Q9BQK8 851 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 MCOLN1Q9GZU1 580 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 ALPK3Q96L96 1907 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 TMEM189-UBE2V1I3L0A0 370 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 TIMP1P01033 207 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 CYP11A1P05108 521 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 ODC1P11926 461 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 BRCC3P46736 316 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 LHX1P48742 406 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 GATMP50440 423 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 PDCLQ13371 301 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 MAMLD1Q13495 774 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 TTC30AQ86WT1 665 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 NPAS4Q8IUM7 802 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 ABI1Q8IZP0 508 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 SPATA18Q8TC71 538 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 HASPINQ8TF76 798 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 CPXM1Q96SM3 734 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 PRDM10Q9NQV6 1147 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 LRFN2Q9ULH4 789 aa18.07■□□□□ 0.48
TPM1-205ENST00000357980 PACSIN2Q9UNF0 486 aaPredicted RBP18.07■□□□□ 0.48
TPM1-205ENST00000357980 COL4A6Q14031 1691 aa18.06■□□□□ 0.48
TPM1-205ENST00000357980 I3L4J1 428 aa18.06■□□□□ 0.48
TPM1-205ENST00000357980 HOXA2O43364 376 aa18.06■□□□□ 0.48
TPM1-205ENST00000357980 SRGAP2O75044 1071 aa18.06■□□□□ 0.48
TPM1-205ENST00000357980 GSCP56915 257 aaPredicted RBP18.06■□□□□ 0.48
TPM1-205ENST00000357980 RNASELQ05823 741 aaKnown RBP18.06■□□□□ 0.48
TPM1-205ENST00000357980 KIAA0319Q5VV43 1072 aa18.06■□□□□ 0.48
TPM1-205ENST00000357980 PEX26Q7Z412 305 aa18.06■□□□□ 0.48
TPM1-205ENST00000357980 PHLDB2Q86SQ0 1253 aa18.06■□□□□ 0.48
TPM1-205ENST00000357980 UBA3Q8TBC4 463 aa18.06■□□□□ 0.48
TPM1-205ENST00000357980 RSPH1Q8WYR4 309 aa18.06■□□□□ 0.48
TPM1-205ENST00000357980 SUSD3Q96L08 255 aa18.06■□□□□ 0.48
TPM1-205ENST00000357980 OSBPL9Q96SU4 736 aa18.06■□□□□ 0.48
TPM1-205ENST00000357980 TRIM7Q9C029 511 aa18.06■□□□□ 0.48
TPM1-205ENST00000357980 DNAI2Q9GZS0 605 aa18.06■□□□□ 0.48
TPM1-205ENST00000357980 DDX43Q9NXZ2 648 aaKnown RBP18.06■□□□□ 0.48
TPM1-205ENST00000357980 DNAJB4Q9UDY4 337 aa18.06■□□□□ 0.48
TPM1-205ENST00000357980 HYOU1Q9Y4L1 999 aa18.06■□□□□ 0.48
TPM1-205ENST00000357980 TIMM13Q9Y5L4 95 aaPredicted RBP18.06■□□□□ 0.48
TPM1-205ENST00000357980 SCINQ9Y6U3 715 aa18.06■□□□□ 0.48
TPM1-205ENST00000357980 SLU7O95391 586 aaKnown RBP18.05■□□□□ 0.48
TPM1-205ENST00000357980 CCDC130P13994 396 aa18.05■□□□□ 0.48
TPM1-205ENST00000357980 TCP1P17987 556 aaKnown RBP18.05■□□□□ 0.48
TPM1-205ENST00000357980 ACAT1P24752 427 aaKnown RBP18.05■□□□□ 0.48
TPM1-205ENST00000357980 GABRB2P47870 512 aa18.05■□□□□ 0.48
TPM1-205ENST00000357980 PSMC1P62191 440 aaKnown RBP18.05■□□□□ 0.48
TPM1-205ENST00000357980 IKBKEQ14164 716 aa18.05■□□□□ 0.48
TPM1-205ENST00000357980 WHAMMP3Q1A5X7 153 aa18.05■□□□□ 0.48
TPM1-205ENST00000357980 HES6Q96HZ4 224 aa18.05■□□□□ 0.48
TPM1-205ENST00000357980 BTBD6Q96KE9 485 aa18.05■□□□□ 0.48
TPM1-205ENST00000357980 MRPL47Q9HD33 250 aaKnown RBP18.05■□□□□ 0.48
TPM1-205ENST00000357980 PARVAQ9NVD7 372 aa18.05■□□□□ 0.48
TPM1-205ENST00000357980 RNF216Q9NWF9 866 aaPredicted RBP18.05■□□□□ 0.48
TPM1-205ENST00000357980 TJP2Q9UDY2 1190 aa18.05■□□□□ 0.48
TPM1-205ENST00000357980 ANAPC7Q9UJX3 599 aa18.05■□□□□ 0.48
TPM1-205ENST00000357980 STRIP2Q9ULQ0 834 aa18.05■□□□□ 0.48
TPM1-205ENST00000357980 ALG6Q9Y672 507 aa18.05■□□□□ 0.48
TPM1-205ENST00000357980 ATP2C2O75185 946 aa18.05■□□□□ 0.48
TPM1-205ENST00000357980 PTPN1P18031 435 aaKnown RBP18.05■□□□□ 0.48
TPM1-205ENST00000357980 GTF2F1P35269 517 aaKnown RBP eCLIP18.05■□□□□ 0.48
TPM1-205ENST00000357980 PTPROQ16827 1216 aa18.05■□□□□ 0.48
TPM1-205ENST00000357980 CCDC142Q17RM4 750 aa18.05■□□□□ 0.48
TPM1-205ENST00000357980 PPP1R15BQ5SWA1 713 aa18.05■□□□□ 0.48
TPM1-205ENST00000357980 CYP4A22Q5TCH4 519 aa18.05■□□□□ 0.48
TPM1-205ENST00000357980 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.05■□□□□ 0.48
TPM1-205ENST00000357980 C3orf20Q8ND61 904 aa18.05■□□□□ 0.48
TPM1-205ENST00000357980 LRRN4CLQ8ND94 238 aa18.05■□□□□ 0.48
TPM1-205ENST00000357980 COG1Q8WTW3 980 aa18.05■□□□□ 0.48
TPM1-205ENST00000357980 RTP3Q9BQQ7 232 aa18.05■□□□□ 0.48
TPM1-205ENST00000357980 NRDE2Q9H7Z3 1164 aa18.05■□□□□ 0.48
TPM1-205ENST00000357980 DSEQ9UL01 958 aa18.05■□□□□ 0.48
TPM1-205ENST00000357980 ZNF185O15231 689 aa18.04■□□□□ 0.48
TPM1-205ENST00000357980 ERBB2P04626 1255 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms