RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 MAGEA10P43363 369 aaPredicted RBP13.36□□□□□ -0.27
SMC4-202ENST00000357388 PPIDQ08752 370 aaKnown RBP13.36□□□□□ -0.27
SMC4-202ENST00000357388 SFSWAPQ12872 951 aaKnown RBP13.36□□□□□ -0.27
SMC4-202ENST00000357388 MTF1Q14872 753 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 FAM182BQ5T319 152 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 C3orf62Q6ZUJ4 267 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 PABPC3Q9H361 631 aaKnown RBP13.36□□□□□ -0.27
SMC4-202ENST00000357388 PIGUQ9H490 435 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 TMBIM4Q9HC24 238 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.36□□□□□ -0.27
SMC4-202ENST00000357388 GMEB1Q9Y692 573 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 NLRP1Q9C000 1473 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 GRIN3BO60391 1043 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 MTRF1O75570 445 aaKnown RBP13.36□□□□□ -0.27
SMC4-202ENST00000357388 ZCCHC18P0CG32 403 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 ADARP55265 1226 aaKnown RBP13.36□□□□□ -0.27
SMC4-202ENST00000357388 NCALDP61601 193 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 TKFCQ3LXA3 575 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 ANKRD40Q6AI12 368 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 KRT78Q8N1N4 520 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 VPS33AQ96AX1 596 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 RSAD1Q9HA92 442 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 RXFP1Q9HBX9 757 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 SPATA2Q9UM82 520 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 NDUFS3O75489 264 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 MAPK1P28482 360 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 TTKP33981 857 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 GALCP54803 685 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 ZNF507Q8TCN5 953 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 TMEM47Q9BQJ4 181 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 MMADHCQ9H3L0 296 aaPredicted RBP13.36□□□□□ -0.27
SMC4-202ENST00000357388 KRT84Q9NSB2 600 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 HEY2Q9UBP5 337 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 ENOPH1Q9UHY7 261 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 POTEMA6NI47 508 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 SUPT3HB4E1H0 165 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 APRTP07741 180 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 ITGA8P53708 1063 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 NME3Q13232 169 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 PRMT9Q6P2P2 845 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 ZNF677Q86XU0 584 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 OR6J1Q8NGC5 347 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 ATXN7L3BQ96GX2 97 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 SERHL2Q9H4I8 314 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 SERHLQ9NQF3 203 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 NFKBIL1Q9UBC1 381 aaPredicted RBP13.35□□□□□ -0.27
SMC4-202ENST00000357388 ZNF862O60290 1169 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 IFNA14P01570 189 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 ERFP50548 548 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 DCTN2Q13561 401 aaKnown RBP13.35□□□□□ -0.27
SMC4-202ENST00000357388 SF3B3Q15393 1217 aaKnown RBP13.35□□□□□ -0.27
SMC4-202ENST00000357388 C12orf60Q5U649 245 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 NYAP1Q6ZVC0 841 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 OR2W6PQ8NHA6 318 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 STRBPQ96SI9 672 aaKnown RBP13.35□□□□□ -0.27
SMC4-202ENST00000357388 SIK2Q9H0K1 926 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 L2HGDHQ9H9P8 463 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 DMAP1Q9NPF5 467 aaPredicted RBP13.35□□□□□ -0.27
SMC4-202ENST00000357388 CD274Q9NZQ7 290 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 CNTFP26441 200 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 NCKAP1LP55160 1127 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 CACHD1Q5VU97 1274 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 ARID3BQ8IVW6 561 aaPredicted RBP13.35□□□□□ -0.27
SMC4-202ENST00000357388 CENPLQ8N0S6 344 aaPredicted RBP13.35□□□□□ -0.27
SMC4-202ENST00000357388 STKLD1Q8NE28 680 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 C18orf8Q96DM3 657 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 HMG20AQ9NP66 347 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 PCDHA10Q9Y5I2 948 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 FAM25AB3EWG3 89 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 FAM25CB3EWG5 89 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 FAM25GB3EWG6 89 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 SOAT2O75908 522 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 MLNP12872 115 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 PRLRP16471 622 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 RGS2P41220 211 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 RXRGP48443 463 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 USP11P51784 963 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 PDIA5Q14554 519 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 GRM4Q14833 912 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 TAF1CQ15572 869 aaPredicted RBP13.35□□□□□ -0.27
SMC4-202ENST00000357388 KIZQ2M2Z5 673 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 RIN2Q8WYP3 895 aaPredicted RBP13.35□□□□□ -0.27
SMC4-202ENST00000357388 PLEKHF1Q96S99 279 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 CACNA2D2Q9NY47 1150 aa13.35□□□□□ -0.27
SMC4-202ENST00000357388 CDHR2Q9BYE9 1310 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 ABCA5Q8WWZ7 1642 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 UBXN8O00124 270 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 TADA2AO75478 443 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 SNRPFP62306 86 aaKnown RBP13.34□□□□□ -0.27
SMC4-202ENST00000357388 SLC34A1Q06495 639 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 PDK1Q15118 436 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 TXNRD1Q16881 649 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 USP39Q53GS9 565 aaKnown RBP13.34□□□□□ -0.27
SMC4-202ENST00000357388 CYP4Z1Q86W10 505 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 PARK7Q99497 189 aaKnown RBP13.34□□□□□ -0.27
SMC4-202ENST00000357388 ZFYVE28Q9HCC9 887 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 TUFT1Q9NNX1 390 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 RBAKQ9NYW8 714 aaPredicted RBP13.34□□□□□ -0.27
SMC4-202ENST00000357388 TMCC3Q9ULS5 477 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 IPPQ9Y573 584 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms