RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 RWDD2BP57060 319 aa24.17■■□□□ 1.46
SCAMP3-202ENST00000355379 RNASE9P60153 205 aaKnown RBP24.17■■□□□ 1.46
SCAMP3-202ENST00000355379 LRRC1Q9BTT6 524 aa24.17■■□□□ 1.46
SCAMP3-202ENST00000355379 MIS12Q9H081 205 aa24.17■■□□□ 1.46
SCAMP3-202ENST00000355379 SNX25Q9H3E2 840 aa24.17■■□□□ 1.46
SCAMP3-202ENST00000355379 RSAD1Q9HA92 442 aa24.17■■□□□ 1.46
SCAMP3-202ENST00000355379 TSPAN16Q9UKR8 245 aa24.17■■□□□ 1.46
SCAMP3-202ENST00000355379 SIGLEC16A6NMB1 481 aa24.16■■□□□ 1.46
SCAMP3-202ENST00000355379 A8MXQ7 604 aa24.16■■□□□ 1.46
SCAMP3-202ENST00000355379 CAPN15O75808 1086 aa24.16■■□□□ 1.46
SCAMP3-202ENST00000355379 HSPA6P17066 643 aa24.16■■□□□ 1.46
SCAMP3-202ENST00000355379 GNL1P36915 607 aaPredicted RBP24.16■■□□□ 1.46
SCAMP3-202ENST00000355379 MARCKSL1P49006 195 aa24.16■■□□□ 1.46
SCAMP3-202ENST00000355379 FAM43BQ6ZT52 329 aaPredicted RBP24.16■■□□□ 1.46
SCAMP3-202ENST00000355379 ACOT1Q86TX2 421 aa24.16■■□□□ 1.46
SCAMP3-202ENST00000355379 CPNE8Q86YQ8 564 aa24.16■■□□□ 1.46
SCAMP3-202ENST00000355379 RGS18Q9NS28 235 aa24.16■■□□□ 1.46
SCAMP3-202ENST00000355379 L1RE1Q9UN81 338 aa24.16■■□□□ 1.46
SCAMP3-202ENST00000355379 ERLIN1O75477 346 aa24.15■■□□□ 1.46
SCAMP3-202ENST00000355379 PDCLQ13371 301 aa24.15■■□□□ 1.46
SCAMP3-202ENST00000355379 LONRF2Q1L5Z9 754 aa24.15■■□□□ 1.46
SCAMP3-202ENST00000355379 GOLGA7BQ2TAP0 167 aa24.15■■□□□ 1.46
SCAMP3-202ENST00000355379 PKDCCQ504Y2 493 aa24.15■■□□□ 1.46
SCAMP3-202ENST00000355379 SEL1L2Q5TEA6 688 aa24.15■■□□□ 1.46
SCAMP3-202ENST00000355379 C8orf74Q6P047 294 aa24.15■■□□□ 1.46
SCAMP3-202ENST00000355379 TMCO3Q6UWJ1 677 aa24.15■■□□□ 1.46
SCAMP3-202ENST00000355379 ECHDC2Q86YB7 292 aa24.15■■□□□ 1.46
SCAMP3-202ENST00000355379 CPXM1Q96SM3 734 aa24.15■■□□□ 1.46
SCAMP3-202ENST00000355379 PLVAPQ9BX97 442 aa24.15■■□□□ 1.46
SCAMP3-202ENST00000355379 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.15■■□□□ 1.46
SCAMP3-202ENST00000355379 KRIT1O00522 736 aa24.15■■□□□ 1.46
SCAMP3-202ENST00000355379 INPPL1O15357 1258 aa24.15■■□□□ 1.46
SCAMP3-202ENST00000355379 PSTPIP1O43586 416 aa24.15■■□□□ 1.46
SCAMP3-202ENST00000355379 FGGP02679 453 aa24.15■■□□□ 1.46
SCAMP3-202ENST00000355379 FGFR1P11362 822 aa24.15■■□□□ 1.46
SCAMP3-202ENST00000355379 PAX3P23760 479 aa24.15■■□□□ 1.46
SCAMP3-202ENST00000355379 SCNN1GP51170 649 aa24.15■■□□□ 1.46
SCAMP3-202ENST00000355379 PSMC1P62191 440 aaKnown RBP24.15■■□□□ 1.46
SCAMP3-202ENST00000355379 VSNL1P62760 191 aa24.15■■□□□ 1.46
SCAMP3-202ENST00000355379 PPP2R5EQ16537 467 aa24.15■■□□□ 1.46
SCAMP3-202ENST00000355379 PPP1R26Q5T8A7 1209 aaPredicted RBP24.15■■□□□ 1.46
SCAMP3-202ENST00000355379 CYP4A22Q5TCH4 519 aa24.15■■□□□ 1.46
SCAMP3-202ENST00000355379 DCUN1D2Q6PH85 259 aa24.15■■□□□ 1.46
SCAMP3-202ENST00000355379 ZNF598Q86UK7 904 aaKnown RBP24.15■■□□□ 1.46
SCAMP3-202ENST00000355379 XYLT1Q86Y38 959 aa24.15■■□□□ 1.46
SCAMP3-202ENST00000355379 ADGRF2Q8IZF7 708 aa24.15■■□□□ 1.46
SCAMP3-202ENST00000355379 NIPA2Q8N8Q9 360 aa24.15■■□□□ 1.46
SCAMP3-202ENST00000355379 C12orf29Q8N999 325 aa24.15■■□□□ 1.46
SCAMP3-202ENST00000355379 MCRS1Q96EZ8 462 aa24.15■■□□□ 1.46
SCAMP3-202ENST00000355379 CYB561D2O14569 222 aa24.14■■□□□ 1.45
SCAMP3-202ENST00000355379 ERBB2P04626 1255 aa24.14■■□□□ 1.45
SCAMP3-202ENST00000355379 PFKMP08237 780 aa24.14■■□□□ 1.45
SCAMP3-202ENST00000355379 RPL7AP62424 266 aaKnown RBP24.14■■□□□ 1.45
SCAMP3-202ENST00000355379 ZNF211Q13398 564 aaPredicted RBP24.14■■□□□ 1.45
SCAMP3-202ENST00000355379 PIGHQ14442 188 aaPredicted RBP24.14■■□□□ 1.45
SCAMP3-202ENST00000355379 CC2D1AQ6P1N0 951 aaPredicted RBP24.14■■□□□ 1.45
SCAMP3-202ENST00000355379 RHOT1Q8IXI2 618 aa24.14■■□□□ 1.45
SCAMP3-202ENST00000355379 UBA3Q8TBC4 463 aa24.14■■□□□ 1.45
SCAMP3-202ENST00000355379 IPO4Q8TEX9 1081 aaKnown RBP24.14■■□□□ 1.45
SCAMP3-202ENST00000355379 STK32AQ8WU08 396 aa24.14■■□□□ 1.45
SCAMP3-202ENST00000355379 TNIP3Q96KP6 325 aa24.14■■□□□ 1.45
SCAMP3-202ENST00000355379 MCEEQ96PE7 176 aa24.14■■□□□ 1.45
SCAMP3-202ENST00000355379 KRT12Q99456 494 aa24.14■■□□□ 1.45
SCAMP3-202ENST00000355379 SYNCQ9H7C4 482 aa24.14■■□□□ 1.45
SCAMP3-202ENST00000355379 RNF216Q9NWF9 866 aaPredicted RBP24.14■■□□□ 1.45
SCAMP3-202ENST00000355379 OGDHLQ9ULD0 1010 aa24.14■■□□□ 1.45
SCAMP3-202ENST00000355379 PODXLO00592 558 aa24.13■■□□□ 1.45
SCAMP3-202ENST00000355379 EOMESO95936 686 aa24.13■■□□□ 1.45
SCAMP3-202ENST00000355379 PYGMP11217 842 aa24.13■■□□□ 1.45
SCAMP3-202ENST00000355379 AFF1P51825 1210 aaKnown RBP24.13■■□□□ 1.45
SCAMP3-202ENST00000355379 GRIK3Q13003 919 aa24.13■■□□□ 1.45
SCAMP3-202ENST00000355379 BFSP2Q13515 415 aa24.13■■□□□ 1.45
SCAMP3-202ENST00000355379 MBTPS1Q14703 1052 aa24.13■■□□□ 1.45
SCAMP3-202ENST00000355379 FAM126BQ8IXS8 530 aa24.13■■□□□ 1.45
SCAMP3-202ENST00000355379 FNIP1Q8TF40 1166 aa24.13■■□□□ 1.45
SCAMP3-202ENST00000355379 DDX27Q96GQ7 796 aaKnown RBP24.13■■□□□ 1.45
SCAMP3-202ENST00000355379 ARFGAP3Q9NP61 516 aa24.13■■□□□ 1.45
SCAMP3-202ENST00000355379 HESX1Q9UBX0 185 aa24.13■■□□□ 1.45
SCAMP3-202ENST00000355379 GABRDO14764 452 aa24.12■■□□□ 1.45
SCAMP3-202ENST00000355379 GJB6O95452 261 aa24.12■■□□□ 1.45
SCAMP3-202ENST00000355379 KRT3P12035 628 aa24.12■■□□□ 1.45
SCAMP3-202ENST00000355379 SELPP16109 830 aa24.12■■□□□ 1.45
SCAMP3-202ENST00000355379 SNX16P57768 344 aa24.12■■□□□ 1.45
SCAMP3-202ENST00000355379 FAM189BP81408 668 aa24.12■■□□□ 1.45
SCAMP3-202ENST00000355379 LRRC8DQ7L1W4 858 aa24.12■■□□□ 1.45
SCAMP3-202ENST00000355379 TMEM86AQ8N2M4 240 aa24.12■■□□□ 1.45
SCAMP3-202ENST00000355379 UROC1Q96N76 676 aa24.12■■□□□ 1.45
SCAMP3-202ENST00000355379 AP1M1Q9BXS5 423 aa24.12■■□□□ 1.45
SCAMP3-202ENST00000355379 FTHL17Q9BXU8 183 aa24.12■■□□□ 1.45
SCAMP3-202ENST00000355379 SLITRK6Q9H5Y7 841 aa24.12■■□□□ 1.45
SCAMP3-202ENST00000355379 GOLGA6L10A0A0M3HER8 536 aa24.11■■□□□ 1.45
SCAMP3-202ENST00000355379 C9IYK1 514 aa24.11■■□□□ 1.45
SCAMP3-202ENST00000355379 ATP8B1O43520 1251 aa24.11■■□□□ 1.45
SCAMP3-202ENST00000355379 ZRANB2O95218 330 aaKnown RBP eCLIP24.11■■□□□ 1.45
SCAMP3-202ENST00000355379 AARSP49588 968 aaKnown RBP eCLIP24.11■■□□□ 1.45
SCAMP3-202ENST00000355379 CLCNKBP51801 687 aa24.11■■□□□ 1.45
SCAMP3-202ENST00000355379 ZNF252P-AS1Q0IIN9 211 aa24.11■■□□□ 1.45
SCAMP3-202ENST00000355379 UPP1Q16831 310 aa24.11■■□□□ 1.45
SCAMP3-202ENST00000355379 LRRC38Q5VT99 294 aa24.11■■□□□ 1.45
SCAMP3-202ENST00000355379 SLC24A5Q71RS6 500 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms