RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 DIS3Q9Y2L1 958 aaKnown RBP12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 CDY2AQ9Y6F7 541 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 GOLGA8RI6L899 631 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 SPIRE1Q08AE8 756 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 DUSP28Q4G0W2 176 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 ANKRD20A3Q5VUR7 823 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 DAW1Q8N136 415 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 BBS5Q8N3I7 341 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 HDAC7Q8WUI4 952 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 TELO2Q9Y4R8 837 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 PCDHB7Q9Y5E2 793 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 BTAF1O14981 1849 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 GIPC1O14908 333 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 IRF1P10914 325 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 SLC1A1P43005 524 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 ARL4CP56559 192 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 PIGHQ14442 188 aaPredicted RBP12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 FAM47EQ6ZV65 393 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 ABRAQ8N0Z2 381 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 PABPC5Q96DU9 382 aaKnown RBP12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 MAML3Q96JK9 1138 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 TLR10Q9BXR5 811 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 PLEKHA5Q9HAU0 1116 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 MCF2P10911 925 aa12.96□□□□□ -0.33
PCDHB11-201ENST00000354757 GPD1P21695 349 aa12.96□□□□□ -0.33
PCDHB11-201ENST00000354757 ALDH7A1P49419 539 aaKnown RBP12.96□□□□□ -0.33
PCDHB11-201ENST00000354757 MTHFD1LQ6UB35 978 aa12.96□□□□□ -0.33
PCDHB11-201ENST00000354757 ATL2Q8NHH9 583 aa12.96□□□□□ -0.33
PCDHB11-201ENST00000354757 ZSWIM1Q9BR11 485 aa12.96□□□□□ -0.33
PCDHB11-201ENST00000354757 DDX43Q9NXZ2 648 aaKnown RBP12.96□□□□□ -0.33
PCDHB11-201ENST00000354757 GCKP35557 465 aa12.96□□□□□ -0.33
PCDHB11-201ENST00000354757 INHBEP58166 350 aa12.96□□□□□ -0.33
PCDHB11-201ENST00000354757 NBPF20Q3BBV1 942 aa12.96□□□□□ -0.33
PCDHB11-201ENST00000354757 TAF2Q6P1X5 1199 aa12.96□□□□□ -0.33
PCDHB11-201ENST00000354757 MYLK4Q86YV6 388 aaPredicted RBP12.96□□□□□ -0.33
PCDHB11-201ENST00000354757 KRT35Q92764 455 aa12.96□□□□□ -0.33
PCDHB11-201ENST00000354757 C12orf42Q96LP6 360 aa12.96□□□□□ -0.33
PCDHB11-201ENST00000354757 GANQ9H2C0 597 aa12.96□□□□□ -0.33
PCDHB11-201ENST00000354757 G3BP2Q9UN86 482 aaKnown RBP12.96□□□□□ -0.33
PCDHB11-201ENST00000354757 NRCAMQ92823 1304 aa12.96□□□□□ -0.33
PCDHB11-201ENST00000354757 DCDC2CA8MYV0 355 aa12.96□□□□□ -0.34
PCDHB11-201ENST00000354757 APOL1O14791 398 aa12.96□□□□□ -0.34
PCDHB11-201ENST00000354757 PTENP60484 403 aa12.96□□□□□ -0.34
PCDHB11-201ENST00000354757 BYSLQ13895 437 aaKnown RBP12.96□□□□□ -0.34
PCDHB11-201ENST00000354757 MEA1Q16626 185 aa12.96□□□□□ -0.34
PCDHB11-201ENST00000354757 KYNUQ16719 465 aa12.96□□□□□ -0.34
PCDHB11-201ENST00000354757 CCNI2Q6ZMN8 369 aaPredicted RBP12.96□□□□□ -0.34
PCDHB11-201ENST00000354757 SLC13A5Q86YT5 568 aaPredicted RBP12.96□□□□□ -0.34
PCDHB11-201ENST00000354757 GABPB2Q8TAK5 448 aaPredicted RBP12.96□□□□□ -0.34
PCDHB11-201ENST00000354757 ACO2Q99798 780 aaKnown RBP12.96□□□□□ -0.34
PCDHB11-201ENST00000354757 FSD1LQ9BXM9 530 aa12.96□□□□□ -0.34
PCDHB11-201ENST00000354757 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.96□□□□□ -0.34
PCDHB11-201ENST00000354757 TSR3Q9UJK0 312 aaKnown RBP12.96□□□□□ -0.34
PCDHB11-201ENST00000354757 RASA4BC9J798 803 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 SCAMP3O14828 347 aaKnown RBP12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 RASA4O43374 803 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 SMPD1P17405 629 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 EPHB2P29323 1055 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 CD52P31358 61 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 FKBP1BP68106 108 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 VPS52Q8N1B4 723 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 C12orf29Q8N999 325 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 FAM71DQ8N9W8 422 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 GSDMBQ8TAX9 411 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 SLC2A14Q8TDB8 520 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 LRRC8CQ8TDW0 803 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 RXFP2Q8WXD0 754 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 CAPNS2Q96L46 248 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 ZFP42Q96MM3 310 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 APBA2Q99767 749 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 KRT82Q9NSB4 513 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 TMEM88BA6NKF7 163 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 STAMBPO95630 424 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 APOEP02649 317 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 VDRP11473 427 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 XPAP23025 273 aaPredicted RBP12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 CACNA2D3Q8IZS8 1091 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 CD99L2Q8TCZ2 262 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 EXT2Q93063 718 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 TMEM169Q96HH4 297 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 PIDD1Q9HB75 910 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 ABCF3Q9NUQ8 709 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 LAMB4A4D0S4 1761 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 SPEF2Q9C093 1822 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 GON4LQ3T8J9 2241 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 CST3P01034 146 aaPredicted RBP12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 GZMAP12544 262 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 CCDC130P13994 396 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 CRHR2Q13324 411 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 PLPPR4Q7Z2D5 763 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 ZNF677Q86XU0 584 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 SH3TC2Q8TF17 1288 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 FAM172AQ8WUF8 416 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 CARD9Q9H257 536 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 ANKZF1Q9H8Y5 726 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 DDX56Q9NY93 547 aaKnown RBP12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 A6NNZ2 444 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 H3BRJ5 948 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 DHX15O43143 795 aaKnown RBP12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 GCNT1Q02742 428 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms