RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 HEATR4Q86WZ0 1026 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 SFRP1Q8N474 314 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 SLC30A5Q8TAD4 765 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 ANKS1AQ92625 1134 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 UBP1Q9NZI7 540 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 ADGRF5Q8IZF2 1346 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 ASAP3Q8TDY4 903 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 UGT2B28Q9BY64 529 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 CLK4Q9HAZ1 481 aaKnown RBP13.1□□□□□ -0.31
COL6A3-203ENST00000353578 OLA1Q9NTK5 396 aaKnown RBP13.1□□□□□ -0.31
COL6A3-203ENST00000353578 THAP1Q9NVV9 213 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 HEATR9A2RTY3 570 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 ZBED4O75132 1171 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 PARNO95453 639 aaKnown RBP13.1□□□□□ -0.31
COL6A3-203ENST00000353578 GUCA1CO95843 209 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 RPL19P84098 196 aaKnown RBP13.1□□□□□ -0.31
COL6A3-203ENST00000353578 MCL1Q07820 350 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 PTPROQ16827 1216 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 HAO1Q9UJM8 370 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 SNX13Q9Y5W8 968 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 ZNF197O14709 1029 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 PLA2G4BP0C869 781 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 MAGEA4P43358 317 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 RBM43Q6ZSC3 357 aaKnown RBP13.1□□□□□ -0.31
COL6A3-203ENST00000353578 DHDDSQ86SQ9 333 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 SENP7Q9BQF6 1050 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 STOX2Q9P2F5 926 aaPredicted RBP13.1□□□□□ -0.31
COL6A3-203ENST00000353578 GGA1Q9UJY5 639 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 ABCC10Q5T3U5 1492 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 NCAPD2Q15021 1401 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 A0A0G2JPF8 293 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 HNRNPCL3B7ZW38 293 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 HNRNPCL4P0DMR1 293 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 C5orf22Q49AR2 442 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 XKR9Q5GH70 373 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 RAD51CO43502 376 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 ITGA6P23229 1130 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 MMP14P50281 582 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 SLC29A2Q14542 456 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 CACHD1Q5VU97 1274 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 SYTL2Q9HCH5 934 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 NRBP2Q9NSY0 501 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 TUBE1Q9UJT0 475 aa13.1□□□□□ -0.31
COL6A3-203ENST00000353578 WDR7Q9Y4E6 1490 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 EFCAB10A6NFE3 127 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 ADD1P35611 737 aaKnown RBP13.09□□□□□ -0.31
COL6A3-203ENST00000353578 JAK3P52333 1124 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 ITGADQ13349 1161 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 NECTIN1Q15223 517 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 EID3Q8N140 333 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 TBC1D19Q8N5T2 526 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 MYDGFQ969H8 173 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 PNKPQ96T60 521 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 FAM213AQ9BRX8 229 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 LRMDAQ9H2I8 198 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 CYLDQ9NQC7 956 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 CASZ1Q86V15 1759 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 E5RI56 91 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 UBE3AQ05086 875 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 HINFPQ9BQA5 517 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 RMND5AQ9H871 391 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 RAD54BQ9Y620 910 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 FAM83EQ2M2I3 478 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 MEI1Q5TIA1 1274 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 POLNQ7Z5Q5 900 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 TC2NQ8N9U0 490 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 ANKHQ9HCJ1 492 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 MED14O60244 1454 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 METTL21EPA6NDL7 271 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 CDK7P50613 346 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 AKR1D1P51857 326 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 ARHGEF16Q5VV41 709 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 RWDD4Q6NW29 188 aaKnown RBP13.09□□□□□ -0.31
COL6A3-203ENST00000353578 ANKS3Q6ZW76 656 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 GIPC3Q8TF64 312 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 HEY2Q9UBP5 337 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 UBASH3BQ8TF42 649 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 WNK4Q96J92 1243 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 CCDC17Q96LX7 622 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 KIFC1Q9BW19 673 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 RPL22P35268 128 aaKnown RBP13.09□□□□□ -0.31
COL6A3-203ENST00000353578 RAB2AP61019 212 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 CLVS1Q8IUQ0 354 aaPredicted RBP13.09□□□□□ -0.31
COL6A3-203ENST00000353578 DPP10Q8N608 796 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 MCPH1Q8NEM0 835 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 C17orf80Q9BSJ5 609 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 APOL6Q9BWW8 343 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 FANCAO15360 1455 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 PBRM1Q86U86 1689 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 EIF4E1BA6NMX2 242 aaKnown RBP13.09□□□□□ -0.31
COL6A3-203ENST00000353578 CCNCP24863 283 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 STILQ15468 1287 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 NUAK2Q9H093 628 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 PICK1Q9NRD5 415 aa13.09□□□□□ -0.31
COL6A3-203ENST00000353578 ZC3H11AO75152 810 aaKnown RBP eCLIP13.08□□□□□ -0.31
COL6A3-203ENST00000353578 DDHD2O94830 711 aa13.08□□□□□ -0.31
COL6A3-203ENST00000353578 SEC24AO95486 1093 aa13.08□□□□□ -0.31
COL6A3-203ENST00000353578 ALDH5A1P51649 535 aaPredicted RBP13.08□□□□□ -0.31
COL6A3-203ENST00000353578 ACTR2P61160 394 aa13.08□□□□□ -0.31
COL6A3-203ENST00000353578 PTK6Q13882 451 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms