RNA–Protein interactions for RNA: ENST00000350199.8

RNF38-202, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-202ENST00000350199 SENP1Q9P0U3 644 aa20.3■□□□□ 0.84
RNF38-202ENST00000350199 BARX2Q9UMQ3 279 aaPredicted RBP20.3■□□□□ 0.84
RNF38-202ENST00000350199 CDH8P55286 799 aa20.3■□□□□ 0.84
RNF38-202ENST00000350199 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.3■□□□□ 0.84
RNF38-202ENST00000350199 IFT43Q96FT9 208 aa20.3■□□□□ 0.84
RNF38-202ENST00000350199 SLC13A1Q9BZW2 595 aa20.3■□□□□ 0.84
RNF38-202ENST00000350199 ZNF449Q6P9G9 518 aa20.29■□□□□ 0.84
RNF38-202ENST00000350199 ZC3H7BQ9UGR2 993 aaKnown RBP20.29■□□□□ 0.84
RNF38-202ENST00000350199 CHMP2BQ9UQN3 213 aa20.29■□□□□ 0.84
RNF38-202ENST00000350199 PRG3Q9Y2Y8 225 aaPredicted RBP20.29■□□□□ 0.84
RNF38-202ENST00000350199 ATP9BO43861 1147 aa20.29■□□□□ 0.84
RNF38-202ENST00000350199 AKAP5P24588 427 aa20.29■□□□□ 0.84
RNF38-202ENST00000350199 PLPPR4Q7Z2D5 763 aa20.29■□□□□ 0.84
RNF38-202ENST00000350199 LNX1Q8TBB1 728 aaPredicted RBP20.29■□□□□ 0.84
RNF38-202ENST00000350199 HDAC7Q8WUI4 952 aa20.29■□□□□ 0.84
RNF38-202ENST00000350199 FAM129AQ9BZQ8 928 aa20.29■□□□□ 0.84
RNF38-202ENST00000350199 RAB21Q9UL25 225 aa20.29■□□□□ 0.84
RNF38-202ENST00000350199 CES2O00748 559 aa20.29■□□□□ 0.84
RNF38-202ENST00000350199 ZNF189O75820 626 aaPredicted RBP20.29■□□□□ 0.84
RNF38-202ENST00000350199 FARP2O94887 1054 aaPredicted RBP20.29■□□□□ 0.84
RNF38-202ENST00000350199 ODC1P11926 461 aa20.29■□□□□ 0.84
RNF38-202ENST00000350199 NDST1P52848 882 aa20.29■□□□□ 0.84
RNF38-202ENST00000350199 BCAT1P54687 386 aa20.29■□□□□ 0.84
RNF38-202ENST00000350199 VCPIP1Q96JH7 1222 aa20.29■□□□□ 0.84
RNF38-202ENST00000350199 SPON2Q9BUD6 331 aa20.29■□□□□ 0.84
RNF38-202ENST00000350199 BCAP29Q9UHQ4 241 aa20.29■□□□□ 0.84
RNF38-202ENST00000350199 SPDYE5A6NIY4 337 aa20.29■□□□□ 0.84
RNF38-202ENST00000350199 CHN1P15882 459 aa20.29■□□□□ 0.84
RNF38-202ENST00000350199 MX2P20592 715 aa20.29■□□□□ 0.84
RNF38-202ENST00000350199 PTENP60484 403 aa20.29■□□□□ 0.84
RNF38-202ENST00000350199 NAA25Q14CX7 972 aa20.29■□□□□ 0.84
RNF38-202ENST00000350199 PABPC3Q9H361 631 aaKnown RBP20.29■□□□□ 0.84
RNF38-202ENST00000350199 REXO2Q9Y3B8 237 aaKnown RBP20.29■□□□□ 0.84
RNF38-202ENST00000350199 FIS1Q9Y3D6 152 aa20.29■□□□□ 0.84
RNF38-202ENST00000350199 RASSF3Q86WH2 238 aa20.28■□□□□ 0.84
RNF38-202ENST00000350199 DCP1BQ8IZD4 617 aaKnown RBP20.28■□□□□ 0.84
RNF38-202ENST00000350199 FBXO25Q8TCJ0 367 aa20.28■□□□□ 0.84
RNF38-202ENST00000350199 MBOAT7Q96N66 472 aa20.28■□□□□ 0.84
RNF38-202ENST00000350199 TRIM56Q9BRZ2 755 aaKnown RBP20.28■□□□□ 0.84
RNF38-202ENST00000350199 ZSCAN5CA6NGD5 496 aaPredicted RBP20.28■□□□□ 0.84
RNF38-202ENST00000350199 ZBBXA8MT70 800 aa20.28■□□□□ 0.84
RNF38-202ENST00000350199 AP1G2O75843 785 aa20.28■□□□□ 0.84
RNF38-202ENST00000350199 MCL1Q07820 350 aa20.28■□□□□ 0.84
RNF38-202ENST00000350199 SNCBQ16143 134 aa20.28■□□□□ 0.84
RNF38-202ENST00000350199 LMNTD2Q8IXW0 634 aa20.28■□□□□ 0.84
RNF38-202ENST00000350199 KPNA6O60684 536 aa20.28■□□□□ 0.84
RNF38-202ENST00000350199 JAG1P78504 1218 aa20.28■□□□□ 0.84
RNF38-202ENST00000350199 IRF2BP2Q7Z5L9 587 aa20.28■□□□□ 0.84
RNF38-202ENST00000350199 FAM71AQ8IYT1 594 aa20.28■□□□□ 0.84
RNF38-202ENST00000350199 GBP7Q8N8V2 638 aaPredicted RBP20.28■□□□□ 0.84
RNF38-202ENST00000350199 TTC1Q99614 292 aa20.28■□□□□ 0.84
RNF38-202ENST00000350199 CNPY3Q9BT09 278 aa20.28■□□□□ 0.84
RNF38-202ENST00000350199 ROPN1BQ9BZX4 212 aaPredicted RBP20.28■□□□□ 0.84
RNF38-202ENST00000350199 ROPN1Q9HAT0 212 aaPredicted RBP20.28■□□□□ 0.84
RNF38-202ENST00000350199 CRYBG1Q9Y4K1 1723 aa20.28■□□□□ 0.84
RNF38-202ENST00000350199 SH3BP5O60239 455 aa20.28■□□□□ 0.84
RNF38-202ENST00000350199 THP07101 528 aa20.28■□□□□ 0.84
RNF38-202ENST00000350199 AKR1A1P14550 325 aa20.28■□□□□ 0.84
RNF38-202ENST00000350199 CALRP27797 417 aaKnown RBP20.28■□□□□ 0.84
RNF38-202ENST00000350199 GJC2Q5T442 439 aaPredicted RBP20.28■□□□□ 0.84
RNF38-202ENST00000350199 KLC3Q6P597 504 aa20.28■□□□□ 0.84
RNF38-202ENST00000350199 SPOCD1Q6ZMY3 1216 aa20.28■□□□□ 0.84
RNF38-202ENST00000350199 ZNF662Q6ZS27 426 aa20.28■□□□□ 0.84
RNF38-202ENST00000350199 PPIL6Q8IXY8 311 aa20.28■□□□□ 0.84
RNF38-202ENST00000350199 FAM172AQ8WUF8 416 aa20.28■□□□□ 0.84
RNF38-202ENST00000350199 ZFATQ9P243 1243 aa20.28■□□□□ 0.84
RNF38-202ENST00000350199 GOLGA8RI6L899 631 aa20.27■□□□□ 0.84
RNF38-202ENST00000350199 PYGMP11217 842 aa20.27■□□□□ 0.84
RNF38-202ENST00000350199 ACO1P21399 889 aaKnown RBP20.27■□□□□ 0.84
RNF38-202ENST00000350199 HIBCHQ6NVY1 386 aaPredicted RBP20.27■□□□□ 0.84
RNF38-202ENST00000350199 RAPGEF5Q92565 580 aa20.27■□□□□ 0.84
RNF38-202ENST00000350199 PRMT1Q99873 361 aaKnown RBP20.27■□□□□ 0.84
RNF38-202ENST00000350199 M0QYT0 321 aa20.27■□□□□ 0.84
RNF38-202ENST00000350199 PEX10O60683 326 aa20.27■□□□□ 0.84
RNF38-202ENST00000350199 DCTN3O75935 186 aa20.27■□□□□ 0.84
RNF38-202ENST00000350199 UPP2O95045 317 aa20.27■□□□□ 0.84
RNF38-202ENST00000350199 S100BP04271 92 aaPredicted RBP20.27■□□□□ 0.84
RNF38-202ENST00000350199 SKIP12755 728 aa20.27■□□□□ 0.84
RNF38-202ENST00000350199 KCNA2P16389 499 aa20.27■□□□□ 0.84
RNF38-202ENST00000350199 YY1P25490 414 aa20.27■□□□□ 0.84
RNF38-202ENST00000350199 PSEN2P49810 448 aa20.27■□□□□ 0.84
RNF38-202ENST00000350199 PDK1Q15118 436 aa20.27■□□□□ 0.84
RNF38-202ENST00000350199 AVENQ9NQS1 362 aaPredicted RBP20.27■□□□□ 0.84
RNF38-202ENST00000350199 TJP2Q9UDY2 1190 aa20.27■□□□□ 0.84
RNF38-202ENST00000350199 TSPAN16Q9UKR8 245 aa20.27■□□□□ 0.84
RNF38-202ENST00000350199 SMAPO00193 183 aa20.27■□□□□ 0.84
RNF38-202ENST00000350199 EIF3HO15372 352 aaKnown RBP eCLIP20.27■□□□□ 0.84
RNF38-202ENST00000350199 CALCAP01258 141 aa20.27■□□□□ 0.84
RNF38-202ENST00000350199 ZCWPW2Q504Y3 356 aa20.27■□□□□ 0.84
RNF38-202ENST00000350199 PDCD6IPQ8WUM4 868 aaKnown RBP20.27■□□□□ 0.84
RNF38-202ENST00000350199 USP18Q9UMW8 372 aa20.27■□□□□ 0.84
RNF38-202ENST00000350199 HSPA4LO95757 839 aa20.27■□□□□ 0.83
RNF38-202ENST00000350199 TDRD10Q5VZ19 366 aaKnown RBP20.27■□□□□ 0.83
RNF38-202ENST00000350199 C3orf62Q6ZUJ4 267 aa20.27■□□□□ 0.83
RNF38-202ENST00000350199 C12orf56Q8IXR9 622 aa20.27■□□□□ 0.83
RNF38-202ENST00000350199 RXFP2Q8WXD0 754 aa20.27■□□□□ 0.83
RNF38-202ENST00000350199 SOCS4Q8WXH5 440 aa20.27■□□□□ 0.83
RNF38-202ENST00000350199 MYH2Q9UKX2 1941 aa20.26■□□□□ 0.83
RNF38-202ENST00000350199 NUP98P52948 1817 aa20.26■□□□□ 0.83
RNF38-202ENST00000350199 VEPH1Q14D04 833 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms