RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 TUFT1Q9NNX1 390 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 CAB39Q9Y376 341 aaPredicted RBP12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 NWD2Q9ULI1 1742 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 SLC5A2P31639 672 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 FOLH1Q04609 750 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 DLG1Q12959 904 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 KRT80Q6KB66 452 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 CADM1Q9BY67 442 aaKnown RBP12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 USP40Q9NVE5 1235 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 B2RBV5 119 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 IDH3BO43837 385 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 ECE2O60344 883 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 CALM1P0DP23 149 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 CALM2P0DP24 149 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 CALM3P0DP25 149 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 EVI2BP34910 448 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 SDE2Q6IQ49 451 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 UNC13DQ70J99 1090 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 ERI1Q8IV48 349 aaKnown RBP12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 NDUFAF2Q8N183 169 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 REXO1Q8N1G1 1221 aaKnown RBP12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 SRBD1Q8N5C6 995 aaKnown RBP12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 USP38Q8NB14 1042 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 SNF8Q96H20 258 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 MED15Q96RN5 788 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 KLHL3Q9UH77 587 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 PHTF1Q9UMS5 762 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 AQP9O43315 295 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 AMPD1P23109 780 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 EEF1DP29692 281 aaKnown RBP12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 DNM2P50570 870 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 MARSP56192 900 aaKnown RBP12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 OTUD4Q01804 1114 aaKnown RBP12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 MDH1BQ5I0G3 518 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 XKR5Q6UX68 686 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 RIN3Q8TB24 985 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 PYDC1Q8WXC3 89 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 PEX13Q92968 403 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 TUBB6Q9BUF5 446 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 NOC4LQ9BVI4 516 aaKnown RBP12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 RUBCNLQ9H714 662 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 CHKBQ9Y259 395 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 TAF1P21675 1872 aa12.78□□□□□ -0.36
CTNNB1-201ENST00000349496 E9PMD0 336 aa12.77□□□□□ -0.36
CTNNB1-201ENST00000349496 H3BRJ5 948 aa12.77□□□□□ -0.36
CTNNB1-201ENST00000349496 HNRNPCL1O60812 293 aaKnown RBP12.77□□□□□ -0.36
CTNNB1-201ENST00000349496 PPP6R2O75170 966 aa12.77□□□□□ -0.36
CTNNB1-201ENST00000349496 TNFAIP8O95379 198 aa12.77□□□□□ -0.36
CTNNB1-201ENST00000349496 BMP10O95393 424 aa12.77□□□□□ -0.36
CTNNB1-201ENST00000349496 ZNF135P52742 658 aaPredicted RBP12.77□□□□□ -0.36
CTNNB1-201ENST00000349496 NR1H2P55055 460 aa12.77□□□□□ -0.36
CTNNB1-201ENST00000349496 ANKRD20A4Q4UJ75 823 aa12.77□□□□□ -0.36
CTNNB1-201ENST00000349496 COL23A1Q86Y22 540 aaPredicted RBP12.77□□□□□ -0.36
CTNNB1-201ENST00000349496 CRACR2BQ8N4Y2 399 aaPredicted RBP12.77□□□□□ -0.36
CTNNB1-201ENST00000349496 FANCBQ8NB91 859 aa12.77□□□□□ -0.36
CTNNB1-201ENST00000349496 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.77□□□□□ -0.36
CTNNB1-201ENST00000349496 PGM2Q96G03 612 aa12.77□□□□□ -0.36
CTNNB1-201ENST00000349496 C8orf37Q96NL8 207 aa12.77□□□□□ -0.36
CTNNB1-201ENST00000349496 HERC2P3Q9BVR0 1158 aa12.77□□□□□ -0.36
CTNNB1-201ENST00000349496 RTFDC1Q9BY42 306 aaPredicted RBP12.77□□□□□ -0.36
CTNNB1-201ENST00000349496 PABPC3Q9H361 631 aaKnown RBP12.77□□□□□ -0.36
CTNNB1-201ENST00000349496 SERHL2Q9H4I8 314 aa12.77□□□□□ -0.36
CTNNB1-201ENST00000349496 ZFYVE28Q9HCC9 887 aa12.77□□□□□ -0.36
CTNNB1-201ENST00000349496 SLC35C2Q9NQQ7 365 aa12.77□□□□□ -0.36
CTNNB1-201ENST00000349496 EMC3Q9P0I2 261 aa12.77□□□□□ -0.36
CTNNB1-201ENST00000349496 LIMA1Q9UHB6 759 aaKnown RBP12.77□□□□□ -0.36
CTNNB1-201ENST00000349496 VANGL2Q9ULK5 521 aa12.77□□□□□ -0.36
CTNNB1-201ENST00000349496 MAGEB6P1A0A0J9YX57 407 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 GRID2IPA4D2P6 1211 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 SIGLEC16A6NMB1 481 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 GAS7O60861 476 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 USP17L8P0C7I0 530 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 IL6STP40189 918 aaPredicted RBP12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 POLD2P49005 469 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 STX1BP61266 288 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 NCOA4Q13772 614 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 SPDYCQ5MJ68 293 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 ZNF618Q5T7W0 954 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 ELMOD1Q8N336 334 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 GDPD5Q8WTR4 605 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 BCL7CQ8WUZ0 217 aaPredicted RBP12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 WASF1Q92558 559 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 NSL1Q96IY1 281 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 ACAT2Q9BWD1 397 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 PLA2G12BQ9BX93 195 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 HPS4Q9NQG7 708 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 CAPN11Q9UMQ6 739 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 FLT1P17948 1338 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 TJP1Q07157 1748 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 A0A0B4J203 849 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 PP2D1A8MPX8 630 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 H0YC42 278 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 SEMA3EO15041 775 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 ZC3H11AO75152 810 aaKnown RBP eCLIP12.77□□□□□ -0.378e-7■□□□□ 10.2
CTNNB1-201ENST00000349496 SRGAP2CP0DJJ0 459 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 SRGAP2BP0DMP2 458 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 SERPINB1P30740 379 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 MCM7P33993 719 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 PHKA2P46019 1235 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms