RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 THEM5Q8N1Q8 247 aa20.21■□□□□ 0.83
CHMP4A-201ENST00000347519 AUTS2Q8WXX7 1259 aa20.21■□□□□ 0.83
CHMP4A-201ENST00000347519 RIN2Q8WYP3 895 aaPredicted RBP20.21■□□□□ 0.83
CHMP4A-201ENST00000347519 ACBD6Q9BR61 282 aa20.21■□□□□ 0.83
CHMP4A-201ENST00000347519 ALG13Q9NP73 1137 aaKnown RBP20.21■□□□□ 0.83
CHMP4A-201ENST00000347519 CDH9Q9ULB4 789 aa20.21■□□□□ 0.83
CHMP4A-201ENST00000347519 SSU72P8A0A1W2PR75 194 aa20.2■□□□□ 0.82
CHMP4A-201ENST00000347519 CARNS1A5YM72 827 aa20.2■□□□□ 0.82
CHMP4A-201ENST00000347519 O00370 1275 aa20.2■□□□□ 0.82
CHMP4A-201ENST00000347519 C2CD2LO14523 706 aa20.2■□□□□ 0.82
CHMP4A-201ENST00000347519 ADAM12O43184 909 aa20.2■□□□□ 0.82
CHMP4A-201ENST00000347519 DNAJB1P25685 340 aa20.2■□□□□ 0.82
CHMP4A-201ENST00000347519 CTXN3Q4LDR2 81 aa20.2■□□□□ 0.82
CHMP4A-201ENST00000347519 INTS6LQ5JSJ4 861 aaKnown RBP20.2■□□□□ 0.82
CHMP4A-201ENST00000347519 DENND1BQ6P3S1 775 aa20.2■□□□□ 0.82
CHMP4A-201ENST00000347519 PAQR9Q6ZVX9 377 aa20.2■□□□□ 0.82
CHMP4A-201ENST00000347519 DNAAF5Q86Y56 855 aa20.2■□□□□ 0.82
CHMP4A-201ENST00000347519 GLYCTKQ8IVS8 523 aa20.2■□□□□ 0.82
CHMP4A-201ENST00000347519 VPS52Q8N1B4 723 aa20.2■□□□□ 0.82
CHMP4A-201ENST00000347519 SLC30A5Q8TAD4 765 aa20.2■□□□□ 0.82
CHMP4A-201ENST00000347519 CERS4Q9HA82 394 aa20.2■□□□□ 0.82
CHMP4A-201ENST00000347519 SPTLC3Q9NUV7 552 aa20.2■□□□□ 0.82
CHMP4A-201ENST00000347519 GTF3C4Q9UKN8 822 aa20.2■□□□□ 0.82
CHMP4A-201ENST00000347519 BZW2Q9Y6E2 419 aaKnown RBP20.2■□□□□ 0.82
CHMP4A-201ENST00000347519 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.2■□□□□ 0.82
CHMP4A-201ENST00000347519 PTPRDP23468 1912 aa20.19■□□□□ 0.82
CHMP4A-201ENST00000347519 A0A087X0T9 212 aa20.19■□□□□ 0.82
CHMP4A-201ENST00000347519 C5orf67F2Z3F1 127 aa20.19■□□□□ 0.82
CHMP4A-201ENST00000347519 CLDN5O00501 218 aa20.19■□□□□ 0.82
CHMP4A-201ENST00000347519 ZNF263O14978 683 aa20.19■□□□□ 0.82
CHMP4A-201ENST00000347519 FAM228BP0C875 321 aa20.19■□□□□ 0.82
CHMP4A-201ENST00000347519 RPL17P18621 184 aaKnown RBP20.19■□□□□ 0.82
CHMP4A-201ENST00000347519 TNFAIP3P21580 790 aa20.19■□□□□ 0.82
CHMP4A-201ENST00000347519 PCSK1P29120 753 aa20.19■□□□□ 0.82
CHMP4A-201ENST00000347519 ERVK-21P61565 698 aa20.19■□□□□ 0.82
CHMP4A-201ENST00000347519 DSG1Q02413 1049 aa20.19■□□□□ 0.82
CHMP4A-201ENST00000347519 SGO2Q562F6 1265 aa20.19■□□□□ 0.82
CHMP4A-201ENST00000347519 ARHGAP17Q68EM7 881 aa20.19■□□□□ 0.82
CHMP4A-201ENST00000347519 FAM171BQ6P995 826 aa20.19■□□□□ 0.82
CHMP4A-201ENST00000347519 PASD1Q8IV76 773 aa20.19■□□□□ 0.82
CHMP4A-201ENST00000347519 CCDC112Q8NEF3 446 aa20.19■□□□□ 0.82
CHMP4A-201ENST00000347519 SPPL3Q8TCT6 385 aa20.19■□□□□ 0.82
CHMP4A-201ENST00000347519 PIK3R5Q8WYR1 880 aa20.19■□□□□ 0.82
CHMP4A-201ENST00000347519 TNIP3Q96KP6 325 aa20.19■□□□□ 0.82
CHMP4A-201ENST00000347519 TGS1Q96RS0 853 aaKnown RBP20.19■□□□□ 0.82
CHMP4A-201ENST00000347519 B3GNT5Q9BYG0 378 aa20.19■□□□□ 0.82
CHMP4A-201ENST00000347519 ZCWPW1Q9H0M4 648 aa20.19■□□□□ 0.82
CHMP4A-201ENST00000347519 ZBP1Q9H171 429 aa20.19■□□□□ 0.82
CHMP4A-201ENST00000347519 NENFQ9UMX5 172 aa20.19■□□□□ 0.82
CHMP4A-201ENST00000347519 LILRB3O75022 631 aa20.18■□□□□ 0.82
CHMP4A-201ENST00000347519 MICAL2O94851 1124 aa20.18■□□□□ 0.82
CHMP4A-201ENST00000347519 DNAJB2P25686 324 aa20.18■□□□□ 0.82
CHMP4A-201ENST00000347519 GLUD2P49448 558 aa20.18■□□□□ 0.82
CHMP4A-201ENST00000347519 KIF11P52732 1056 aa20.18■□□□□ 0.82
CHMP4A-201ENST00000347519 ERVFC1P60507 584 aa20.18■□□□□ 0.82
CHMP4A-201ENST00000347519 KRT17Q04695 432 aa20.18■□□□□ 0.82
CHMP4A-201ENST00000347519 GFPT1Q06210 699 aaPredicted RBP20.18■□□□□ 0.82
CHMP4A-201ENST00000347519 CNGA2Q16280 664 aa20.18■□□□□ 0.82
CHMP4A-201ENST00000347519 PSMD5Q16401 504 aa20.18■□□□□ 0.82
CHMP4A-201ENST00000347519 GOLGA7BQ2TAP0 167 aa20.18■□□□□ 0.82
CHMP4A-201ENST00000347519 ZNF280DQ6N043 979 aa20.18■□□□□ 0.82
CHMP4A-201ENST00000347519 FUKQ8N0W3 1084 aa20.18■□□□□ 0.82
CHMP4A-201ENST00000347519 SLC2A14Q8TDB8 520 aa20.18■□□□□ 0.82
CHMP4A-201ENST00000347519 MYLPFQ96A32 169 aa20.18■□□□□ 0.82
CHMP4A-201ENST00000347519 CYFIP2Q96F07 1278 aa20.18■□□□□ 0.82
CHMP4A-201ENST00000347519 CCDC42Q96M95 316 aa20.18■□□□□ 0.82
CHMP4A-201ENST00000347519 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.18■□□□□ 0.82
CHMP4A-201ENST00000347519 PLVAPQ9BX97 442 aa20.18■□□□□ 0.82
CHMP4A-201ENST00000347519 TAS2R14Q9NYV8 317 aa20.18■□□□□ 0.82
CHMP4A-201ENST00000347519 MTRRQ9UBK8 725 aa20.18■□□□□ 0.82
CHMP4A-201ENST00000347519 ADAMTS1Q9UHI8 967 aa20.18■□□□□ 0.82
CHMP4A-201ENST00000347519 MSRAQ9UJ68 235 aa20.18■□□□□ 0.82
CHMP4A-201ENST00000347519 KIAA1257Q9ULG3 409 aa20.18■□□□□ 0.82
CHMP4A-201ENST00000347519 PYCARDQ9ULZ3 195 aa20.18■□□□□ 0.82
CHMP4A-201ENST00000347519 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.18■□□□□ 0.82
CHMP4A-201ENST00000347519 RWDD3Q9Y3V2 267 aa20.18■□□□□ 0.82
CHMP4A-201ENST00000347519 ATG2AQ2TAZ0 1938 aa20.18■□□□□ 0.82
CHMP4A-201ENST00000347519 CHD9Q3L8U1 2897 aa20.17■□□□□ 0.82
CHMP4A-201ENST00000347519 H7C4K7 107 aa20.17■□□□□ 0.82
CHMP4A-201ENST00000347519 GRM6O15303 877 aa20.17■□□□□ 0.82
CHMP4A-201ENST00000347519 ADORA2BP29275 332 aa20.17■□□□□ 0.82
CHMP4A-201ENST00000347519 RAB30Q15771 203 aa20.17■□□□□ 0.82
CHMP4A-201ENST00000347519 KIAA1841Q6NSI8 718 aa20.17■□□□□ 0.82
CHMP4A-201ENST00000347519 LCLAT1Q6UWP7 414 aa20.17■□□□□ 0.82
CHMP4A-201ENST00000347519 TOGARAM2Q6ZUX3 1019 aa20.17■□□□□ 0.82
CHMP4A-201ENST00000347519 ANKS3Q6ZW76 656 aa20.17■□□□□ 0.82
CHMP4A-201ENST00000347519 TTC30AQ86WT1 665 aa20.17■□□□□ 0.82
CHMP4A-201ENST00000347519 ZNF677Q86XU0 584 aa20.17■□□□□ 0.82
CHMP4A-201ENST00000347519 WDTC1Q8N5D0 677 aa20.17■□□□□ 0.82
CHMP4A-201ENST00000347519 UBA3Q8TBC4 463 aa20.17■□□□□ 0.82
CHMP4A-201ENST00000347519 MYCBPAPQ8TBZ2 947 aa20.17■□□□□ 0.82
CHMP4A-201ENST00000347519 POF1BQ8WVV4 589 aa20.17■□□□□ 0.82
CHMP4A-201ENST00000347519 PCED1BQ96HM7 432 aa20.17■□□□□ 0.82
CHMP4A-201ENST00000347519 CLSTN3Q9BQT9 956 aa20.17■□□□□ 0.82
CHMP4A-201ENST00000347519 RHOBTB2Q9BYZ6 727 aa20.17■□□□□ 0.82
CHMP4A-201ENST00000347519 SEPT11Q9NVA2 429 aaKnown RBP20.17■□□□□ 0.82
CHMP4A-201ENST00000347519 TSPAN16Q9UKR8 245 aa20.17■□□□□ 0.82
CHMP4A-201ENST00000347519 PCDHGC3Q9UN70 934 aa20.17■□□□□ 0.82
CHMP4A-201ENST00000347519 REXO2Q9Y3B8 237 aaKnown RBP20.17■□□□□ 0.82
CHMP4A-201ENST00000347519 PCDHGC5Q9Y5F6 944 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms