RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 CCDC78A2IDD5 438 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 CCDC130P13994 396 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 JAK3P52333 1124 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 CCDC142Q17RM4 750 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 EPC2Q52LR7 807 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 TMEM63BQ5T3F8 832 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 EGFL6Q8IUX8 553 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 ADGRF4Q8IZF3 695 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 TCP10LQ8TDR4 215 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 MTERF3Q96E29 417 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 MAGEB5Q9BZ81 275 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 VPS33BQ9H267 617 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 TMCO1Q9UM00 188 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 TRPC5OSA6NMA1 111 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 SHOX2O60902 331 aaPredicted RBP12.6□□□□□ -0.39
COL12A1-202ENST00000345356 RIPK1Q13546 671 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 SMTNL2Q2TAL5 461 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 SLC45A4Q5BKX6 768 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 ZNF618Q5T7W0 954 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 BNIPLQ7Z465 357 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 SULF1Q8IWU6 871 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 OR8H2Q8N162 312 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 LRMDAQ9H2I8 198 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 INTS13Q9NVM9 706 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 NMRK1Q9NWW6 199 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 NOD1Q9Y239 953 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 STARD13Q9Y3M8 1113 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 OVOS2A0A0G2JMS6 1433 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 CBFA2T3O75081 653 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 KRT76Q01546 638 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 MEA1Q16626 185 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 ZC2HC1CQ53FD0 456 aaPredicted RBP12.59□□□□□ -0.39
COL12A1-202ENST00000345356 TMEM245Q9H330 911 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 SARS2Q9NP81 518 aaKnown RBP12.59□□□□□ -0.39
COL12A1-202ENST00000345356 RBAKQ9NYW8 714 aaPredicted RBP12.59□□□□□ -0.39
COL12A1-202ENST00000345356 ERFEQ4G0M1 354 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 GIPC3Q8TF64 312 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 ACSF2Q96CM8 615 aaPredicted RBP12.59□□□□□ -0.39
COL12A1-202ENST00000345356 CDHR1Q96JP9 859 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 TMEM247A6NEH6 219 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 PHGDHO43175 533 aaKnown RBP12.59□□□□□ -0.39
COL12A1-202ENST00000345356 P4HBP07237 508 aaKnown RBP12.59□□□□□ -0.39
COL12A1-202ENST00000345356 HSPA2P54652 639 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 RABL6Q3YEC7 729 aaPredicted RBP12.59□□□□□ -0.39
COL12A1-202ENST00000345356 C11orf63Q6NUN7 778 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 KYQ8NBH2 561 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 ECSITQ9BQ95 431 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 TEX12Q9BXU0 123 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 IVNS1ABPQ9Y6Y0 642 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 A8MUI8 341 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 WFS1O76024 890 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 VAV1P15498 845 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 GRK2P25098 689 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 KCNK10P57789 538 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 SLC5A9Q2M3M2 681 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 ARMCX4Q5H9R4 360 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 HDDC2Q7Z4H3 204 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 ILDR1Q86SU0 546 aaPredicted RBP12.59□□□□□ -0.39
COL12A1-202ENST00000345356 DCAF4Q8WV16 495 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 ABHD8Q96I13 439 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 ELMO2Q96JJ3 720 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 AGBL1Q96MI9 1066 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 PAGR1Q9BTK6 254 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 DIABLOQ9NR28 239 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 NINJ2Q9NZG7 142 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 CTNNAL1Q9UBT7 734 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 FAM8A1Q9UBU6 413 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 CNTNAP5Q8WYK1 1306 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 PRR36Q9H6K5 1346 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 A0A087WXM4 84 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 TBKBP1A7MCY6 615 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 VIL1P09327 827 aaKnown RBP12.59□□□□□ -0.39
COL12A1-202ENST00000345356 SOX6P35712 828 aa12.59□□□□□ -0.39
COL12A1-202ENST00000345356 PPARGP37231 505 aaPredicted RBP12.59□□□□□ -0.39
COL12A1-202ENST00000345356 PIK3CDO00329 1044 aa12.58□□□□□ -0.4
COL12A1-202ENST00000345356 ATP6V1E1P36543 226 aa12.58□□□□□ -0.4
COL12A1-202ENST00000345356 QARSP47897 775 aaKnown RBP12.58□□□□□ -0.4
COL12A1-202ENST00000345356 GALK1P51570 392 aa12.58□□□□□ -0.4
COL12A1-202ENST00000345356 GPC3P51654 580 aa12.58□□□□□ -0.4
COL12A1-202ENST00000345356 MTMR1Q13613 665 aa12.58□□□□□ -0.4
COL12A1-202ENST00000345356 PRKG1Q13976 671 aa12.58□□□□□ -0.4
COL12A1-202ENST00000345356 CDH24Q86UP0 819 aa12.58□□□□□ -0.4
COL12A1-202ENST00000345356 SYNE4Q8N205 404 aa12.58□□□□□ -0.4
COL12A1-202ENST00000345356 NLRP4Q96MN2 994 aa12.58□□□□□ -0.4
COL12A1-202ENST00000345356 FOXN3O00409 490 aaPredicted RBP12.58□□□□□ -0.4
COL12A1-202ENST00000345356 TRIM24O15164 1050 aa12.58□□□□□ -0.4
COL12A1-202ENST00000345356 ANPEPP15144 967 aa12.58□□□□□ -0.4
COL12A1-202ENST00000345356 IFNA8P32881 189 aa12.58□□□□□ -0.4
COL12A1-202ENST00000345356 PKN2Q16513 984 aaKnown RBP12.58□□□□□ -0.4
COL12A1-202ENST00000345356 QRICH1Q2TAL8 776 aa12.58□□□□□ -0.4
COL12A1-202ENST00000345356 STK39Q9UEW8 545 aa12.58□□□□□ -0.4
COL12A1-202ENST00000345356 SLC12A6Q9UHW9 1150 aa12.58□□□□□ -0.4
COL12A1-202ENST00000345356 ATP6V1G1O75348 118 aa12.58□□□□□ -0.4
COL12A1-202ENST00000345356 POLBP06746 335 aa12.58□□□□□ -0.4
COL12A1-202ENST00000345356 UGP2Q16851 508 aa12.58□□□□□ -0.4
COL12A1-202ENST00000345356 PPP1R16BQ96T49 567 aa12.58□□□□□ -0.4
COL12A1-202ENST00000345356 C17orf80Q9BSJ5 609 aa12.58□□□□□ -0.4
COL12A1-202ENST00000345356 RAD21L1Q9H4I0 556 aa12.58□□□□□ -0.4
COL12A1-202ENST00000345356 COPS7BQ9H9Q2 264 aaPredicted RBP12.58□□□□□ -0.4
COL12A1-202ENST00000345356 PCDHB2Q9Y5E7 798 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms