RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.63□□□□□ -0.39
SNCA-202ENST00000345009 WEE2P0C1S8 567 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 EPCAMP16422 314 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 KCNA5P22460 613 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 TUFMP49411 452 aaKnown RBP12.63□□□□□ -0.39
SNCA-202ENST00000345009 ITIH3Q06033 890 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 PLD1Q13393 1074 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 KCNC3Q14003 757 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 NCAPHQ15003 741 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 KRT31Q15323 416 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 SLC39A12Q504Y0 691 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 INTS6LQ5JSJ4 861 aaKnown RBP12.63□□□□□ -0.39
SNCA-202ENST00000345009 SCARA3Q6AZY7 606 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 SMYD5Q6GMV2 418 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 SPOPLQ6IQ16 392 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 ANKRD54Q6NXT1 300 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 RSPO2Q6UXX9 243 aaPredicted RBP12.63□□□□□ -0.39
SNCA-202ENST00000345009 CYP26C1Q6V0L0 522 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 SCARA5Q6ZMJ2 495 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 DHX40Q8IX18 779 aaKnown RBP12.63□□□□□ -0.39
SNCA-202ENST00000345009 TCEAL8Q8IYN2 117 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 PPM1KQ8N3J5 372 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 SPPL2BQ8TCT7 592 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 KBTBD7Q8WVZ9 684 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 JAKMIP2Q96AA8 810 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 SYT15Q9BQS2 421 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 MRPL45Q9BRJ2 306 aaKnown RBP12.63□□□□□ -0.39
SNCA-202ENST00000345009 NT5C1AQ9BXI3 368 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 BCO2Q9BYV7 579 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 INTS2Q9H0H0 1204 aaKnown RBP12.63□□□□□ -0.39
SNCA-202ENST00000345009 ZCWPW1Q9H0M4 648 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 VPS16Q9H269 839 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 SMYD3Q9H7B4 428 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 CYP4F11Q9HBI6 524 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 CBX8Q9HC52 389 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.63□□□□□ -0.392e-6■■■■■ 149.1
SNCA-202ENST00000345009 MAN1C1Q9NR34 630 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 ZDHHC7Q9NXF8 308 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 TAB2Q9NYJ8 693 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 LIMA1Q9UHB6 759 aaKnown RBP12.63□□□□□ -0.39
SNCA-202ENST00000345009 BARX2Q9UMQ3 279 aaPredicted RBP12.63□□□□□ -0.39
SNCA-202ENST00000345009 PCDHB5Q9Y5E4 795 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 COL6A3P12111 3177 aa12.63□□□□□ -0.39
SNCA-202ENST00000345009 WDR27A2RRH5 827 aa12.62□□□□□ -0.39
SNCA-202ENST00000345009 ADAM12O43184 909 aa12.62□□□□□ -0.39
SNCA-202ENST00000345009 XYLBO75191 536 aa12.62□□□□□ -0.39
SNCA-202ENST00000345009 SERPINC1P01008 464 aa12.62□□□□□ -0.39
SNCA-202ENST00000345009 LRG1P02750 347 aa12.62□□□□□ -0.39
SNCA-202ENST00000345009 HNRNPA1P09651 372 aaKnown RBP eCLIP12.62□□□□□ -0.39
SNCA-202ENST00000345009 SPATA31D3P0C874 917 aa12.62□□□□□ -0.39
SNCA-202ENST00000345009 ZNF18P17022 549 aa12.62□□□□□ -0.39
SNCA-202ENST00000345009 PTPN1P18031 435 aaKnown RBP12.62□□□□□ -0.39
SNCA-202ENST00000345009 ASPAP45381 313 aa12.62□□□□□ -0.39
SNCA-202ENST00000345009 ALDH1A3P47895 512 aa12.62□□□□□ -0.39
SNCA-202ENST00000345009 MFAP3P55082 362 aa12.62□□□□□ -0.39
SNCA-202ENST00000345009 CDH8P55286 799 aa12.62□□□□□ -0.39
SNCA-202ENST00000345009 ZNF445P59923 1031 aa12.62□□□□□ -0.39
SNCA-202ENST00000345009 GCNT1Q02742 428 aa12.62□□□□□ -0.39
SNCA-202ENST00000345009 ADCY1Q08828 1119 aa12.62□□□□□ -0.39
SNCA-202ENST00000345009 LRMPQ12912 555 aa12.62□□□□□ -0.39
SNCA-202ENST00000345009 CUL2Q13617 745 aa12.62□□□□□ -0.39
SNCA-202ENST00000345009 IQCB1Q15051 598 aa12.62□□□□□ -0.39
SNCA-202ENST00000345009 PROX2Q3B8N5 592 aa12.62□□□□□ -0.39
SNCA-202ENST00000345009 PPM1LQ5SGD2 360 aa12.62□□□□□ -0.39
SNCA-202ENST00000345009 ATAT1Q5SQI0 421 aa12.62□□□□□ -0.39
SNCA-202ENST00000345009 RNF19BQ6ZMZ0 732 aa12.62□□□□□ -0.39
SNCA-202ENST00000345009 SPATA31D4Q6ZUB0 917 aa12.62□□□□□ -0.39
SNCA-202ENST00000345009 SPATA2LQ8IUW3 424 aaPredicted RBP12.62□□□□□ -0.39
SNCA-202ENST00000345009 ELMOD1Q8N336 334 aa12.62□□□□□ -0.39
SNCA-202ENST00000345009 OR10T2Q8NGX3 314 aa12.62□□□□□ -0.39
SNCA-202ENST00000345009 CRACR2AQ9BSW2 395 aa12.62□□□□□ -0.39
SNCA-202ENST00000345009 APOBEC3GQ9HC16 384 aaKnown RBP12.62□□□□□ -0.39
SNCA-202ENST00000345009 ABCB6Q9NP58 842 aa12.62□□□□□ -0.39
SNCA-202ENST00000345009 THEGQ9P2T0 379 aa12.62□□□□□ -0.39
SNCA-202ENST00000345009 CD207Q9UJ71 328 aa12.62□□□□□ -0.39
SNCA-202ENST00000345009 FBXW11Q9UKB1 542 aa12.62□□□□□ -0.39
SNCA-202ENST00000345009 VWA8A3KMH1 1905 aa12.62□□□□□ -0.39
SNCA-202ENST00000345009 ATP8B3O60423 1300 aa12.62□□□□□ -0.39
SNCA-202ENST00000345009 LINC01565O15544 149 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 ZMYND10O75800 440 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 TPM3P06753 285 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 C8AP07357 584 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 OR4Q2P0C623 313 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 CD58P19256 250 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 RFX1P22670 979 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 ACAT1P24752 427 aaKnown RBP12.61□□□□□ -0.39
SNCA-202ENST00000345009 LMO2P25791 158 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 HOXA9P31269 272 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 NDST1P52848 882 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 COPB1P53618 953 aaKnown RBP12.61□□□□□ -0.39
SNCA-202ENST00000345009 EPHB3P54753 998 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 UBXN1Q04323 297 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 INCA1Q0VD86 236 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 MIIPQ5JXC2 388 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 FAM171BQ6P995 826 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 TRIM65Q6PJ69 517 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 LUZP1Q86V48 1076 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 CRYBG2Q8N1P7 616 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 B3GALNT2Q8NCR0 500 aa12.61□□□□□ -0.39
SNCA-202ENST00000345009 CMASQ8NFW8 434 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms