RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 ZNF335Q9H4Z2 1342 aaPredicted RBP18.81■□□□□ 0.6
SMC4-201ENST00000344722 SAC3D1A6NKF1 404 aa18.81■□□□□ 0.6
SMC4-201ENST00000344722 OCM2P0CE71 109 aa18.81■□□□□ 0.6
SMC4-201ENST00000344722 OCMP0CE72 109 aaPredicted RBP18.81■□□□□ 0.6
SMC4-201ENST00000344722 DEFB107AQ8IZN7 70 aa18.81■□□□□ 0.6
SMC4-201ENST00000344722 ZNF75CPQ92670 426 aaPredicted RBP18.81■□□□□ 0.6
SMC4-201ENST00000344722 RMND5BQ96G75 393 aaPredicted RBP18.81■□□□□ 0.6
SMC4-201ENST00000344722 TMEM79Q9BSE2 394 aa18.81■□□□□ 0.6
SMC4-201ENST00000344722 PAIP1Q9H074 479 aaKnown RBP18.81■□□□□ 0.6
SMC4-201ENST00000344722 SLAIN2Q9P270 581 aa18.81■□□□□ 0.6
SMC4-201ENST00000344722 TYW5A2RUC4 315 aaKnown RBP18.81■□□□□ 0.6
SMC4-201ENST00000344722 DCAF8L1A6NGE4 600 aa18.81■□□□□ 0.6
SMC4-201ENST00000344722 SH3RF1Q7Z6J0 888 aa18.81■□□□□ 0.6
SMC4-201ENST00000344722 ZNF302Q9NR11 478 aa18.81■□□□□ 0.6
SMC4-201ENST00000344722 FAM217BQ9NTX9 383 aaPredicted RBP18.81■□□□□ 0.6
SMC4-201ENST00000344722 SKIV2L2P42285 1042 aaKnown RBP18.81■□□□□ 0.6
SMC4-201ENST00000344722 OTUD4Q01804 1114 aaKnown RBP18.81■□□□□ 0.6
SMC4-201ENST00000344722 STILQ15468 1287 aa18.81■□□□□ 0.6
SMC4-201ENST00000344722 LACTB2Q53H82 288 aaPredicted RBP18.81■□□□□ 0.6
SMC4-201ENST00000344722 SWSAP1Q6NVH7 229 aa18.81■□□□□ 0.6
SMC4-201ENST00000344722 DUSP9Q99956 384 aaKnown RBP18.81■□□□□ 0.6
SMC4-201ENST00000344722 CD209Q9NNX6 404 aa18.81■□□□□ 0.6
SMC4-201ENST00000344722 FAM196BA6NMK8 535 aa18.8■□□□□ 0.6
SMC4-201ENST00000344722 NFIBO00712 420 aa18.8■□□□□ 0.6
SMC4-201ENST00000344722 HLA-DPA1P20036 260 aa18.8■□□□□ 0.6
SMC4-201ENST00000344722 MTM1Q13496 603 aa18.8■□□□□ 0.6
SMC4-201ENST00000344722 ZFP1Q6P2D0 407 aa18.8■□□□□ 0.6
SMC4-201ENST00000344722 SLC25A41Q8N5S1 370 aa18.8■□□□□ 0.6
SMC4-201ENST00000344722 OR6P1Q8NGX9 317 aa18.8■□□□□ 0.6
SMC4-201ENST00000344722 EXD1Q8NHP7 514 aa18.8■□□□□ 0.6
SMC4-201ENST00000344722 FRMPD1Q5SYB0 1578 aa18.8■□□□□ 0.6
SMC4-201ENST00000344722 RAG1P15918 1043 aa18.8■□□□□ 0.6
SMC4-201ENST00000344722 MCL1Q07820 350 aa18.8■□□□□ 0.6
SMC4-201ENST00000344722 ZC3H12BQ5HYM0 836 aaKnown RBP18.8■□□□□ 0.6
SMC4-201ENST00000344722 RIN3Q8TB24 985 aa18.8■□□□□ 0.6
SMC4-201ENST00000344722 ARHGEF1Q92888 912 aaKnown RBP18.8■□□□□ 0.6
SMC4-201ENST00000344722 ELMO2Q96JJ3 720 aa18.8■□□□□ 0.6
SMC4-201ENST00000344722 FAR2Q96K12 515 aa18.8■□□□□ 0.6
SMC4-201ENST00000344722 NR1H4Q96RI1 486 aaPredicted RBP18.8■□□□□ 0.6
SMC4-201ENST00000344722 PTPRUQ92729 1446 aa18.8■□□□□ 0.6
SMC4-201ENST00000344722 SMIM31A0A1B0GVY4 71 aa18.8■□□□□ 0.6
SMC4-201ENST00000344722 KANSL1LA0AUZ9 987 aa18.8■□□□□ 0.6
SMC4-201ENST00000344722 C3orf70A6NLC5 250 aaPredicted RBP18.8■□□□□ 0.6
SMC4-201ENST00000344722 ALADP13716 330 aa18.8■□□□□ 0.6
SMC4-201ENST00000344722 MLH1P40692 756 aa18.8■□□□□ 0.6
SMC4-201ENST00000344722 KCNK10P57789 538 aa18.8■□□□□ 0.6
SMC4-201ENST00000344722 SFSWAPQ12872 951 aaKnown RBP18.8■□□□□ 0.6
SMC4-201ENST00000344722 NCOA4Q13772 614 aa18.8■□□□□ 0.6
SMC4-201ENST00000344722 Q4G0T1 1027 aa18.8■□□□□ 0.6
SMC4-201ENST00000344722 MARK2Q7KZI7 788 aaKnown RBP18.8■□□□□ 0.6
SMC4-201ENST00000344722 CCDC60Q8IWA6 550 aaPredicted RBP18.8■□□□□ 0.6
SMC4-201ENST00000344722 PTPRN2Q92932 1015 aa18.8■□□□□ 0.6
SMC4-201ENST00000344722 ATAD3AQ9NVI7 634 aa18.8■□□□□ 0.6
SMC4-201ENST00000344722 DAPK2Q9UIK4 370 aa18.8■□□□□ 0.6
SMC4-201ENST00000344722 C21orf59P57076 290 aa18.8■□□□□ 0.6
SMC4-201ENST00000344722 ATP1A4Q13733 1029 aa18.8■□□□□ 0.6
SMC4-201ENST00000344722 LAYNQ6UX15 382 aa18.8■□□□□ 0.6
SMC4-201ENST00000344722 ZBTB49Q6ZSB9 765 aa18.8■□□□□ 0.6
SMC4-201ENST00000344722 WNK4Q96J92 1243 aa18.8■□□□□ 0.6
SMC4-201ENST00000344722 PHKA2P46019 1235 aa18.79■□□□□ 0.6
SMC4-201ENST00000344722 FOXD4Q12950 439 aaPredicted RBP18.79■□□□□ 0.6
SMC4-201ENST00000344722 SGSM1Q2NKQ1 1148 aa18.79■□□□□ 0.6
SMC4-201ENST00000344722 CCNJLQ8IV13 435 aa18.79■□□□□ 0.6
SMC4-201ENST00000344722 CELF1Q92879 486 aaKnown RBP18.79■□□□□ 0.6
SMC4-201ENST00000344722 DBNDD1Q9H9R9 158 aa18.79■□□□□ 0.6
SMC4-201ENST00000344722 HACD3Q9P035 362 aa18.79■□□□□ 0.6
SMC4-201ENST00000344722 CAB39Q9Y376 341 aaPredicted RBP18.79■□□□□ 0.6
SMC4-201ENST00000344722 ACTL7BQ9Y614 415 aa18.79■□□□□ 0.6
SMC4-201ENST00000344722 FLT1P17948 1338 aa18.79■□□□□ 0.6
SMC4-201ENST00000344722 HLA-DRAP01903 254 aa18.79■□□□□ 0.6
SMC4-201ENST00000344722 CHN2P52757 468 aa18.79■□□□□ 0.6
SMC4-201ENST00000344722 TFDP3Q5H9I0 405 aa18.79■□□□□ 0.6
SMC4-201ENST00000344722 TSHZ1Q6ZSZ6 1077 aa18.79■□□□□ 0.6
SMC4-201ENST00000344722 NET1Q7Z628 596 aaPredicted RBP18.79■□□□□ 0.6
SMC4-201ENST00000344722 DCLK3Q9C098 648 aa18.79■□□□□ 0.6
SMC4-201ENST00000344722 SHOC2Q9UQ13 582 aa18.79■□□□□ 0.6
SMC4-201ENST00000344722 PCDHA10Q9Y5I2 948 aa18.79■□□□□ 0.6
SMC4-201ENST00000344722 MYRFQ9Y2G1 1151 aa18.79■□□□□ 0.6
SMC4-201ENST00000344722 NUDT17P0C025 328 aa18.79■□□□□ 0.6
SMC4-201ENST00000344722 KIAA0895Q8NCT3 520 aa18.79■□□□□ 0.6
SMC4-201ENST00000344722 GPR101Q96P66 508 aaPredicted RBP18.79■□□□□ 0.6
SMC4-201ENST00000344722 CTNNAL1Q9UBT7 734 aa18.79■□□□□ 0.6
SMC4-201ENST00000344722 SLCO1B7G3V0H7 640 aa18.78■□□□□ 0.6
SMC4-201ENST00000344722 SLC37A4O43826 429 aa18.78■□□□□ 0.6
SMC4-201ENST00000344722 BCL10O95999 233 aa18.78■□□□□ 0.6
SMC4-201ENST00000344722 GYS1P13807 737 aa18.78■□□□□ 0.6
SMC4-201ENST00000344722 CIITAP33076 1130 aa18.78■□□□□ 0.6
SMC4-201ENST00000344722 TCP10LQ8TDR4 215 aa18.78■□□□□ 0.6
SMC4-201ENST00000344722 NPHP4O75161 1426 aaPredicted RBP18.78■□□□□ 0.6
SMC4-201ENST00000344722 E5RI56 91 aa18.78■□□□□ 0.6
SMC4-201ENST00000344722 KYQ8NBH2 561 aa18.78■□□□□ 0.6
SMC4-201ENST00000344722 BEST2Q8NFU1 509 aa18.78■□□□□ 0.6
SMC4-201ENST00000344722 SCFD1Q8WVM8 642 aa18.78■□□□□ 0.6
SMC4-201ENST00000344722 TBC1D10AQ9BXI6 508 aa18.78■□□□□ 0.6
SMC4-201ENST00000344722 KIAA1683Q9H0B3 1180 aa18.78■□□□□ 0.6
SMC4-201ENST00000344722 ARHGEF38Q9NXL2 777 aa18.78■□□□□ 0.6
SMC4-201ENST00000344722 CLEC11AQ9Y240 323 aa18.78■□□□□ 0.6
SMC4-201ENST00000344722 GADL1Q6ZQY3 521 aa18.78■□□□□ 0.6
SMC4-201ENST00000344722 APOPT1Q96IL0 206 aa18.78■□□□□ 0.6
SMC4-201ENST00000344722 FAM193BQ96PV7 902 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms