RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 MAP3K15Q6ZN16 1313 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 CLRN2A0PK11 232 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 OR14I1A6ND48 311 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 RESP18Q5W5W9 173 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 OLFML2AQ68BL7 652 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 COPS6Q7L5N1 327 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 MAEAQ7L5Y9 396 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 EID3Q8N140 333 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 TMED5Q9Y3A6 229 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 RPAP1Q9BWH6 1393 aaPredicted RBP6.4□□□□□ -1.38
VCAN-203ENST00000343200 K7ERI5 159 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 APOC1P02654 83 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 ARSEP51690 589 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 C1orf189Q5VU69 101 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 MZT2AQ6P582 158 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 RNPC3Q96LT9 517 aaKnown RBP6.4□□□□□ -1.39
VCAN-203ENST00000343200 ADPGKQ9BRR6 497 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 PRXQ9BXM0 1461 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 SH3D21A4FU49 640 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 SNAP91O60641 907 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 DDAH1O94760 285 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 MLNP12872 115 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 ACADLP28330 430 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 BNIP1Q12981 228 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 PICALMQ13492 652 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 EFHC1Q5JVL4 640 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 PRR23CQ6ZRP0 262 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 SCAIQ8N9R8 606 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 TRPV1Q8NER1 839 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 PLEKHG4BQ96PX9 1271 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 PHF11Q9UIL8 331 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 MAGED2Q9UNF1 606 aaPredicted RBP6.4□□□□□ -1.39
VCAN-203ENST00000343200 IRAK3Q9Y616 596 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 ABCA8O94911 1581 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 TIMM44O43615 452 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 PHF2O75151 1096 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 PCP11498 1178 aaKnown RBP6.4□□□□□ -1.39
VCAN-203ENST00000343200 PRKAR2AP13861 404 aaKnown RBP6.4□□□□□ -1.39
VCAN-203ENST00000343200 PTDSS1P48651 473 aaKnown RBP6.4□□□□□ -1.39
VCAN-203ENST00000343200 AP1S1P61966 158 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 MCL1Q07820 350 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 HEATR6Q6AI08 1181 aaKnown RBP6.4□□□□□ -1.39
VCAN-203ENST00000343200 STRA8Q7Z7C7 330 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 DHX40Q8IX18 779 aaKnown RBP6.4□□□□□ -1.39
VCAN-203ENST00000343200 MRPL50Q8N5N7 158 aaKnown RBP6.4□□□□□ -1.39
VCAN-203ENST00000343200 KYQ8NBH2 561 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 BLOC1S5Q8TDH9 187 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 STK32AQ8WU08 396 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 NDST4Q9H3R1 872 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 TAGLN3Q9UI15 199 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 MKLN1Q9UL63 735 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 COL6A6A6NMZ7 2263 aa6.4□□□□□ -1.39
VCAN-203ENST00000343200 E7EWF7 191 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 C6orf229H3BNL8 230 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 TBC1D12O60347 775 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 KHDRBS3O75525 346 aaKnown RBP6.39□□□□□ -1.39
VCAN-203ENST00000343200 GSSP48637 474 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 SSTP61278 116 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 CYP27A1Q02318 531 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 CYP51A1Q16850 503 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 ZNF544Q6NX49 715 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 ALKBH5Q6P6C2 394 aaKnown RBP6.39□□□□□ -1.39
VCAN-203ENST00000343200 SMYD4Q8IYR2 804 aaPredicted RBP6.39□□□□□ -1.39
VCAN-203ENST00000343200 DLG3Q92796 817 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 PDLIM2Q96JY6 352 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 C7orf25Q9BPX7 421 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 TMEM138Q9NPI0 162 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 GGA1Q9UJY5 639 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 SNX12Q9UMY4 172 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 TRIOBPQ9H2D6 2365 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 ATP5J2-PTCD1G3V325 749 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 SNRPA1P09661 255 aaKnown RBP6.39□□□□□ -1.39
VCAN-203ENST00000343200 ITGA3P26006 1051 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 ANXA13P27216 316 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 S100GP29377 79 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 SERPINB9P50453 376 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 PSME3P61289 254 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 COPZ1P61923 177 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 GFPT1Q06210 699 aaPredicted RBP6.39□□□□□ -1.39
VCAN-203ENST00000343200 PDCD4Q53EL6 469 aaKnown RBP6.39□□□□□ -1.39
VCAN-203ENST00000343200 ODR4Q5SWX8 454 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 C6orf183Q5T699 404 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 EXOC3L1Q86VI1 746 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 RDM1Q8NG50 284 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 TEKT3Q9BXF9 490 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 ARHGEF38Q9NXL2 777 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 HAO1Q9UJM8 370 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 HCFC1P51610 2035 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 PLCG1P19174 1290 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 VAC14Q08AM6 782 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 DDI2Q5TDH0 399 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 CLEC4GQ6UXB4 293 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 LRRC31Q6UY01 552 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 FAM172AQ8WUF8 416 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 RBM15Q96T37 977 aaKnown RBP eCLIP6.39□□□□□ -1.39
VCAN-203ENST00000343200 YME1L1Q96TA2 773 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 WDR35Q9P2L0 1181 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 MOSPD1Q9UJG1 213 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 VPS4AQ9UN37 437 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 RPH3AQ9Y2J0 694 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms