RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 GMPSP49915 693 aaPredicted RBP8.42□□□□□ -1.06
UBE4B-202ENST00000343090 COBLL1Q53SF7 1204 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 TRIM74Q86UV6 250 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 TRIM73Q86UV7 250 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 APPL2Q8NEU8 664 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 ACTRT1Q8TDG2 376 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 TLR10Q9BXR5 811 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 DDX4Q9NQI0 724 aaKnown RBP8.42□□□□□ -1.06
UBE4B-202ENST00000343090 WDR35Q9P2L0 1181 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 ABT1Q9ULW3 272 aaKnown RBP8.42□□□□□ -1.06
UBE4B-202ENST00000343090 RNF103-CHMP3A0A140T963 221 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 RASSF9O75901 435 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 TCF7P36402 384 aaPredicted RBP8.42□□□□□ -1.06
UBE4B-202ENST00000343090 DSG1Q02413 1049 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 KCNMA1Q12791 1236 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 GRIK5Q16478 980 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 BTBD8Q5XKL5 378 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 ZNF483Q8TF39 744 aaPredicted RBP8.42□□□□□ -1.06
UBE4B-202ENST00000343090 FAM96AQ9H5X1 160 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 OLA1Q9NTK5 396 aaKnown RBP8.42□□□□□ -1.06
UBE4B-202ENST00000343090 SPATA31D1Q6ZQQ2 1576 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 ASB14A6NK59 587 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 SRRM3A6NNA2 597 aaPredicted RBP8.42□□□□□ -1.06
UBE4B-202ENST00000343090 DYNC1LI2O43237 492 aaPredicted RBP8.42□□□□□ -1.06
UBE4B-202ENST00000343090 GSTT1P30711 240 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 RAP1GAPP47736 663 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 ANO4Q32M45 955 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 WLSQ5T9L3 541 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 LRRC8EQ6NSJ5 796 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 IRGCQ6NXR0 463 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 ZNF560Q96MR9 790 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 CDC42EP4Q9H3Q1 356 aaKnown RBP8.42□□□□□ -1.06
UBE4B-202ENST00000343090 SMARCAD1Q9H4L7 1026 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 MANSC1Q9H8J5 431 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 LOC100653049A0A140TA62 436 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 B2RBV5 119 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 DNM1LO00429 736 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 LIN7AO14910 233 aaPredicted RBP8.41□□□□□ -1.06
UBE4B-202ENST00000343090 KRT34O76011 436 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 GPD1P21695 349 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 FNTAP49354 379 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 XRCC4Q13426 336 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 IL17AQ16552 155 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 Q4G0T1 1027 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 ARHGEF19Q8IW93 802 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 CD302Q8IX05 232 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 STK32AQ8WU08 396 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 DACT3Q96B18 629 aaPredicted RBP8.41□□□□□ -1.06
UBE4B-202ENST00000343090 TNIP3Q96KP6 325 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 FAM111AQ96PZ2 611 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 SEMA4AQ9H3S1 761 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 GPATCH2LQ9NWQ4 482 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 LRCH1Q9Y2L9 728 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 WNT7AO00755 349 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 DGKIO75912 1065 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 DPEP1P16444 411 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 CAP2P40123 477 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 KCNA1Q09470 495 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 CHI3L2Q15782 390 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 DCAF6Q58WW2 860 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 GLRA4Q5JXX5 417 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 SH3RF1Q7Z6J0 888 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 NDUFAF2Q8N183 169 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 TTC39CQ8N584 583 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 ITFG2Q969R8 447 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 TMA16Q96EY4 203 aaKnown RBP8.41□□□□□ -1.06
UBE4B-202ENST00000343090 MPP4Q96JB8 637 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 ZDHHC15Q96MV8 337 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 TMEM237Q96Q45 408 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 NT5C1AQ9BXI3 368 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 TRIM15Q9C019 465 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 SHPRHQ149N8 1683 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 JCADQ9P266 1359 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 TRIM49D1C9J1S8 452 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 FOXP2O15409 715 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 KDM1AO60341 852 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 E2F6O75461 281 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 SLURP2P0DP57 97 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 ENO3P13929 434 aaPredicted RBP8.41□□□□□ -1.06
UBE4B-202ENST00000343090 TCN1P20061 433 aaPredicted RBP8.41□□□□□ -1.06
UBE4B-202ENST00000343090 DRD4P21917 467 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 CALB2P22676 271 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 GEMIN4P57678 1058 aaKnown RBP8.41□□□□□ -1.06
UBE4B-202ENST00000343090 ERVK-9P63128 1117 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 ARMCX6Q7L4S7 300 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 PPIL6Q8IXY8 311 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 HPDLQ96IR7 371 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 SERPINB12Q96P63 405 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 KCNQ5Q9NR82 932 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 FAM8A1Q9UBU6 413 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 HACL1Q9UJ83 578 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 TISP43B9A030 160 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 C19orf81C9J6K1 198 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 EEF2KO00418 725 aaKnown RBP8.41□□□□□ -1.06
UBE4B-202ENST00000343090 EPHB6O15197 1021 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 LGR5O75473 907 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 HMBSP08397 361 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 PCSK7Q16549 785 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 ZNF677Q86XU0 584 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 ZFPM1Q8IX07 1006 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms