RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 PLCD4Q9BRC7 762 aa25.28■■□□□ 1.64
NELFB-201ENST00000343053 CCNB1P14635 433 aa25.28■■□□□ 1.64
NELFB-201ENST00000343053 NAMPTP43490 491 aa25.28■■□□□ 1.64
NELFB-201ENST00000343053 MOGSQ13724 837 aa25.28■■□□□ 1.64
NELFB-201ENST00000343053 CIAPIN1Q6FI81 312 aa25.28■■□□□ 1.64
NELFB-201ENST00000343053 RIBC1Q8N443 379 aaPredicted RBP25.28■■□□□ 1.64
NELFB-201ENST00000343053 NKX1-2Q9UD57 310 aaPredicted RBP25.28■■□□□ 1.64
NELFB-201ENST00000343053 NUMBLQ9Y6R0 609 aa25.28■■□□□ 1.64
NELFB-201ENST00000343053 H0YCG3 227 aa25.27■■□□□ 1.64
NELFB-201ENST00000343053 CST8O60676 142 aa25.27■■□□□ 1.64
NELFB-201ENST00000343053 PSMA2P25787 234 aa25.27■■□□□ 1.64
NELFB-201ENST00000343053 ATP11AP98196 1134 aa25.27■■□□□ 1.64
NELFB-201ENST00000343053 MORF4L2Q15014 288 aa25.27■■□□□ 1.64
NELFB-201ENST00000343053 GNPTABQ3T906 1256 aa25.27■■□□□ 1.64
NELFB-201ENST00000343053 WDR83Q9BRX9 315 aaKnown RBP25.27■■□□□ 1.64
NELFB-201ENST00000343053 DHX33Q9H6R0 707 aaKnown RBP25.27■■□□□ 1.64
NELFB-201ENST00000343053 PARP14Q460N5 1801 aa25.27■■□□□ 1.64
NELFB-201ENST00000343053 ZNF132P52740 706 aa25.27■■□□□ 1.64
NELFB-201ENST00000343053 MAPK6Q16659 721 aa25.27■■□□□ 1.64
NELFB-201ENST00000343053 DENND1BQ6P3S1 775 aa25.27■■□□□ 1.64
NELFB-201ENST00000343053 OTOAQ7RTW8 1153 aa25.27■■□□□ 1.64
NELFB-201ENST00000343053 TTC25Q96NG3 672 aa25.27■■□□□ 1.64
NELFB-201ENST00000343053 POLIQ9UNA4 740 aa25.27■■□□□ 1.64
NELFB-201ENST00000343053 STARD13Q9Y3M8 1113 aa25.27■■□□□ 1.64
NELFB-201ENST00000343053 ADGRA2Q96PE1 1338 aa25.26■■□□□ 1.63
NELFB-201ENST00000343053 SPATA31C2B4DYI2 1134 aa25.26■■□□□ 1.63
NELFB-201ENST00000343053 H0Y3Z8 333 aa25.26■■□□□ 1.63
NELFB-201ENST00000343053 EDF1O60869 148 aaKnown RBP25.26■■□□□ 1.63
NELFB-201ENST00000343053 ASS1P00966 412 aaKnown RBP25.26■■□□□ 1.63
NELFB-201ENST00000343053 CALB1P05937 261 aa25.26■■□□□ 1.63
NELFB-201ENST00000343053 EN1Q05925 392 aaPredicted RBP25.26■■□□□ 1.63
NELFB-201ENST00000343053 PDK4Q16654 411 aa25.26■■□□□ 1.63
NELFB-201ENST00000343053 BBS9Q3SYG4 887 aa25.26■■□□□ 1.63
NELFB-201ENST00000343053 SLFN12LQ6IEE8 588 aa25.26■■□□□ 1.63
NELFB-201ENST00000343053 PYROXD1Q8WU10 500 aa25.26■■□□□ 1.63
NELFB-201ENST00000343053 ZBTB10Q96DT7 871 aa25.26■■□□□ 1.63
NELFB-201ENST00000343053 UBN1Q9NPG3 1134 aa25.26■■□□□ 1.63
NELFB-201ENST00000343053 PSMC3IPQ9P2W1 217 aaPredicted RBP25.26■■□□□ 1.63
NELFB-201ENST00000343053 HACL1Q9UJ83 578 aa25.26■■□□□ 1.63
NELFB-201ENST00000343053 SUFUQ9UMX1 484 aa25.26■■□□□ 1.63
NELFB-201ENST00000343053 TCRBV5S1A1TA0A578 114 aa25.26■■□□□ 1.63
NELFB-201ENST00000343053 PIK3R2O00459 728 aa25.26■■□□□ 1.63
NELFB-201ENST00000343053 MAFGO15525 162 aa25.26■■□□□ 1.63
NELFB-201ENST00000343053 KCNA3P22001 575 aa25.26■■□□□ 1.63
NELFB-201ENST00000343053 EPHB2P29323 1055 aa25.26■■□□□ 1.63
NELFB-201ENST00000343053 DPH6Q7L8W6 267 aa25.26■■□□□ 1.63
NELFB-201ENST00000343053 KIAA0319LQ8IZA0 1049 aa25.26■■□□□ 1.63
NELFB-201ENST00000343053 LRRC71Q8N4P6 559 aa25.26■■□□□ 1.63
NELFB-201ENST00000343053 CEP120Q8N960 986 aa25.26■■□□□ 1.63
NELFB-201ENST00000343053 TMEM35BQ8NCS4 154 aa25.26■■□□□ 1.63
NELFB-201ENST00000343053 SLC17A7Q9P2U7 560 aa25.26■■□□□ 1.63
NELFB-201ENST00000343053 CYTH4Q9UIA0 394 aa25.26■■□□□ 1.63
NELFB-201ENST00000343053 USH1CQ9Y6N9 552 aa25.26■■□□□ 1.63
NELFB-201ENST00000343053 ALOX15BO15296 676 aa25.25■■□□□ 1.63
NELFB-201ENST00000343053 PRPF4O43172 522 aaKnown RBP eCLIP25.25■■□□□ 1.631e-7■■■■□ 19.8
NELFB-201ENST00000343053 ARL2P36404 184 aa25.25■■□□□ 1.63
NELFB-201ENST00000343053 ACVR2BQ13705 512 aa25.25■■□□□ 1.63
NELFB-201ENST00000343053 PTPN20Q4JDL3 420 aa25.25■■□□□ 1.63
NELFB-201ENST00000343053 THNSL1Q8IYQ7 743 aa25.25■■□□□ 1.63
NELFB-201ENST00000343053 FBXO36Q8NEA4 188 aa25.25■■□□□ 1.63
NELFB-201ENST00000343053 CPT1BQ92523 772 aa25.25■■□□□ 1.63
NELFB-201ENST00000343053 GRAMD1AQ96CP6 724 aa25.25■■□□□ 1.63
NELFB-201ENST00000343053 GINM1Q9NU53 330 aa25.25■■□□□ 1.63
NELFB-201ENST00000343053 TXLNGQ9NUQ3 528 aa25.25■■□□□ 1.63
NELFB-201ENST00000343053 CNTN6Q9UQ52 1028 aa25.25■■□□□ 1.63
NELFB-201ENST00000343053 GJB1P08034 283 aa25.25■■□□□ 1.63
NELFB-201ENST00000343053 CCND1P24385 295 aa25.25■■□□□ 1.63
NELFB-201ENST00000343053 HMGB2P26583 209 aaKnown RBP25.25■■□□□ 1.63
NELFB-201ENST00000343053 BASP1P80723 227 aaKnown RBP25.25■■□□□ 1.63
NELFB-201ENST00000343053 XRRA1Q6P2D8 792 aa25.25■■□□□ 1.63
NELFB-201ENST00000343053 C3orf62Q6ZUJ4 267 aa25.25■■□□□ 1.63
NELFB-201ENST00000343053 ARFGAP1Q8N6T3 406 aa25.25■■□□□ 1.63
NELFB-201ENST00000343053 NFASCO94856 1347 aa25.24■■□□□ 1.63
NELFB-201ENST00000343053 TYROBPO43914 113 aa25.24■■□□□ 1.63
NELFB-201ENST00000343053 STAM2O75886 525 aa25.24■■□□□ 1.63
NELFB-201ENST00000343053 TMEM63AO94886 807 aa25.24■■□□□ 1.63
NELFB-201ENST00000343053 LDHAP00338 332 aaKnown RBP25.24■■□□□ 1.63
NELFB-201ENST00000343053 TAF1BQ53T94 588 aaPredicted RBP25.24■■□□□ 1.63
NELFB-201ENST00000343053 TRIM50Q86XT4 487 aa25.24■■□□□ 1.63
NELFB-201ENST00000343053 ZNF280CQ8ND82 737 aa25.24■■□□□ 1.63
NELFB-201ENST00000343053 CCHCR1Q8TD31 782 aa25.24■■□□□ 1.63
NELFB-201ENST00000343053 C10orf82Q8WW14 230 aa25.24■■□□□ 1.63
NELFB-201ENST00000343053 PRPF31Q8WWY3 499 aaKnown RBP25.24■■□□□ 1.63
NELFB-201ENST00000343053 HSPH1Q92598 858 aa25.24■■□□□ 1.63
NELFB-201ENST00000343053 MIEF2Q96C03 454 aa25.24■■□□□ 1.63
NELFB-201ENST00000343053 PAFAH2Q99487 392 aa25.24■■□□□ 1.63
NELFB-201ENST00000343053 ACAD9Q9H845 621 aa25.24■■□□□ 1.63
NELFB-201ENST00000343053 PCDH9Q9HC56 1237 aa25.24■■□□□ 1.63
NELFB-201ENST00000343053 RABGEF1Q9UJ41 708 aa25.24■■□□□ 1.63
NELFB-201ENST00000343053 CHMP2BQ9UQN3 213 aa25.24■■□□□ 1.63
NELFB-201ENST00000343053 ATP2A1O14983 1001 aa25.24■■□□□ 1.63
NELFB-201ENST00000343053 KRT19P08727 400 aa25.24■■□□□ 1.63
NELFB-201ENST00000343053 CDH8P55286 799 aa25.24■■□□□ 1.63
NELFB-201ENST00000343053 PLEKHG4Q58EX7 1191 aa25.24■■□□□ 1.63
NELFB-201ENST00000343053 UNC45BQ8IWX7 931 aa25.24■■□□□ 1.63
NELFB-201ENST00000343053 FAM71DQ8N9W8 422 aa25.24■■□□□ 1.63
NELFB-201ENST00000343053 ZNF75CPQ92670 426 aaPredicted RBP25.24■■□□□ 1.63
NELFB-201ENST00000343053 MAFBQ9Y5Q3 323 aaPredicted RBP25.24■■□□□ 1.63
NELFB-201ENST00000343053 PHIPQ8WWQ0 1821 aa25.23■■□□□ 1.63
NELFB-201ENST00000343053 LRCH4O75427 683 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms