RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 LCHNA4D1U4 455 aa17.36■□□□□ 0.37
SNED1-202ENST00000342631 C5orf67F2Z3F1 127 aa17.36■□□□□ 0.37
SNED1-202ENST00000342631 O00370 1275 aa17.36■□□□□ 0.37
SNED1-202ENST00000342631 DDX3XO00571 662 aaKnown RBP eCLIP17.36■□□□□ 0.37
SNED1-202ENST00000342631 FGF18O76093 207 aa17.36■□□□□ 0.37
SNED1-202ENST00000342631 FAM228BP0C875 321 aa17.36■□□□□ 0.37
SNED1-202ENST00000342631 RAB30Q15771 203 aa17.36■□□□□ 0.37
SNED1-202ENST00000342631 TAF3Q5VWG9 929 aa17.36■□□□□ 0.37
SNED1-202ENST00000342631 KIAA1841Q6NSI8 718 aa17.36■□□□□ 0.37
SNED1-202ENST00000342631 FAM171BQ6P995 826 aa17.36■□□□□ 0.37
SNED1-202ENST00000342631 DCP1BQ8IZD4 617 aaKnown RBP17.36■□□□□ 0.37
SNED1-202ENST00000342631 TXLNBQ8N3L3 684 aa17.36■□□□□ 0.37
SNED1-202ENST00000342631 MYCBPAPQ8TBZ2 947 aa17.36■□□□□ 0.37
SNED1-202ENST00000342631 CYFIP2Q96F07 1278 aa17.36■□□□□ 0.37
SNED1-202ENST00000342631 DPEP3Q9H4B8 488 aa17.36■□□□□ 0.37
SNED1-202ENST00000342631 NAGPAQ9UK23 515 aa17.36■□□□□ 0.37
SNED1-202ENST00000342631 ATP8B3O60423 1300 aa17.35■□□□□ 0.37
SNED1-202ENST00000342631 RABGGTBP53611 331 aa17.35■□□□□ 0.37
SNED1-202ENST00000342631 DSG1Q02413 1049 aa17.35■□□□□ 0.37
SNED1-202ENST00000342631 SMARCB1Q12824 385 aa17.35■□□□□ 0.37
SNED1-202ENST00000342631 ORC1Q13415 861 aa17.35■□□□□ 0.37
SNED1-202ENST00000342631 CTXN3Q4LDR2 81 aa17.35■□□□□ 0.37
SNED1-202ENST00000342631 TDHQ8IZJ6 230 aa17.35■□□□□ 0.37
SNED1-202ENST00000342631 OLIG1Q8TAK6 271 aa17.35■□□□□ 0.37
SNED1-202ENST00000342631 LNX1Q8TBB1 728 aaPredicted RBP17.35■□□□□ 0.37
SNED1-202ENST00000342631 HNRNPABQ99729 332 aaKnown RBP17.35■□□□□ 0.37
SNED1-202ENST00000342631 ZSWIM1Q9BR11 485 aa17.35■□□□□ 0.37
SNED1-202ENST00000342631 VN1R3Q9BXE9 311 aa17.35■□□□□ 0.37
SNED1-202ENST00000342631 SEPT11Q9NVA2 429 aaKnown RBP17.35■□□□□ 0.37
SNED1-202ENST00000342631 HESX1Q9UBX0 185 aa17.35■□□□□ 0.37
SNED1-202ENST00000342631 BACE2Q9Y5Z0 518 aa17.35■□□□□ 0.37
SNED1-202ENST00000342631 TBC1D4O60343 1298 aa17.35■□□□□ 0.37
SNED1-202ENST00000342631 CYP1A1P04798 512 aaPredicted RBP17.35■□□□□ 0.37
SNED1-202ENST00000342631 ACAT1P24752 427 aaKnown RBP17.35■□□□□ 0.37
SNED1-202ENST00000342631 CDH5P33151 784 aaPredicted RBP17.35■□□□□ 0.37
SNED1-202ENST00000342631 GLUD2P49448 558 aa17.35■□□□□ 0.37
SNED1-202ENST00000342631 CREMQ03060 361 aa17.35■□□□□ 0.37
SNED1-202ENST00000342631 UBE3AQ05086 875 aa17.35■□□□□ 0.37
SNED1-202ENST00000342631 GFPT1Q06210 699 aaPredicted RBP17.35■□□□□ 0.37
SNED1-202ENST00000342631 MTF1Q14872 753 aa17.35■□□□□ 0.37
SNED1-202ENST00000342631 RTP2Q5QGT7 225 aa17.35■□□□□ 0.37
SNED1-202ENST00000342631 ALKBH5Q6P6C2 394 aaKnown RBP17.35■□□□□ 0.37
SNED1-202ENST00000342631 C12orf29Q8N999 325 aa17.35■□□□□ 0.37
SNED1-202ENST00000342631 TMEM35BQ8NCS4 154 aa17.35■□□□□ 0.37
SNED1-202ENST00000342631 ZCWPW1Q9H0M4 648 aa17.35■□□□□ 0.37
SNED1-202ENST00000342631 CRTAC1Q9NQ79 661 aa17.35■□□□□ 0.37
SNED1-202ENST00000342631 MTRRQ9UBK8 725 aa17.35■□□□□ 0.37
SNED1-202ENST00000342631 MSRAQ9UJ68 235 aa17.35■□□□□ 0.37
SNED1-202ENST00000342631 NENFQ9UMX5 172 aa17.35■□□□□ 0.37
SNED1-202ENST00000342631 ZKSCAN5Q9Y2L8 839 aa17.35■□□□□ 0.37
SNED1-202ENST00000342631 GBF1Q92538 1859 aa17.34■□□□□ 0.37
SNED1-202ENST00000342631 URODP06132 367 aa17.34■□□□□ 0.37
SNED1-202ENST00000342631 CCDC175P0C221 793 aa17.34■□□□□ 0.37
SNED1-202ENST00000342631 CTNNB1P35222 781 aa17.34■□□□□ 0.37
SNED1-202ENST00000342631 PSMC1P62191 440 aaKnown RBP17.34■□□□□ 0.37
SNED1-202ENST00000342631 NFE2Q16621 373 aaPredicted RBP17.34■□□□□ 0.37
SNED1-202ENST00000342631 CLEC16AQ2KHT3 1053 aa17.34■□□□□ 0.37
SNED1-202ENST00000342631 PPP1R26Q5T8A7 1209 aaPredicted RBP17.34■□□□□ 0.37
SNED1-202ENST00000342631 KIAA0319Q5VV43 1072 aa17.34■□□□□ 0.37
SNED1-202ENST00000342631 C4orf50Q6ZRC1 276 aa17.34■□□□□ 0.37
SNED1-202ENST00000342631 TAS1R1Q7RTX1 841 aa17.34■□□□□ 0.37
SNED1-202ENST00000342631 KLHL23Q8NBE8 558 aa17.34■□□□□ 0.37
SNED1-202ENST00000342631 OR10T2Q8NGX3 314 aa17.34■□□□□ 0.37
SNED1-202ENST00000342631 TGS1Q96RS0 853 aaKnown RBP17.34■□□□□ 0.37
SNED1-202ENST00000342631 PKMYT1Q99640 499 aa17.34■□□□□ 0.37
SNED1-202ENST00000342631 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.34■□□□□ 0.37
SNED1-202ENST00000342631 SPTLC3Q9NUV7 552 aa17.34■□□□□ 0.37
SNED1-202ENST00000342631 TSPAN16Q9UKR8 245 aa17.34■□□□□ 0.37
SNED1-202ENST00000342631 ADGRG1Q9Y653 693 aa17.34■□□□□ 0.37
SNED1-202ENST00000342631 GRXCR1A8MXD5 290 aa17.33■□□□□ 0.37
SNED1-202ENST00000342631 CCP110O43303 1012 aa17.33■□□□□ 0.37
SNED1-202ENST00000342631 HCRTO43612 131 aa17.33■□□□□ 0.37
SNED1-202ENST00000342631 RTN2O75298 545 aa17.33■□□□□ 0.37
SNED1-202ENST00000342631 CALCAP01258 141 aa17.33■□□□□ 0.37
SNED1-202ENST00000342631 CA3P07451 260 aa17.33■□□□□ 0.37
SNED1-202ENST00000342631 SETSIPP0DME0 302 aa17.33■□□□□ 0.37
SNED1-202ENST00000342631 UNGP13051 313 aaPredicted RBP17.33■□□□□ 0.37
SNED1-202ENST00000342631 SLC8A3P57103 927 aa17.33■□□□□ 0.37
SNED1-202ENST00000342631 MDH1BQ5I0G3 518 aa17.33■□□□□ 0.37
SNED1-202ENST00000342631 CCDC122Q5T0U0 273 aa17.33■□□□□ 0.37
SNED1-202ENST00000342631 FAM109BQ6ICB4 259 aaPredicted RBP17.33■□□□□ 0.37
SNED1-202ENST00000342631 VPS52Q8N1B4 723 aa17.33■□□□□ 0.37
SNED1-202ENST00000342631 ANKRD52Q8NB46 1076 aa17.33■□□□□ 0.37
SNED1-202ENST00000342631 RIN2Q8WYP3 895 aaPredicted RBP17.33■□□□□ 0.37
SNED1-202ENST00000342631 PCDHB18PQ96TA0 734 aa17.33■□□□□ 0.37
SNED1-202ENST00000342631 C11orf84Q9BUA3 381 aaPredicted RBP17.33■□□□□ 0.37
SNED1-202ENST00000342631 ISCUQ9H1K1 167 aa17.33■□□□□ 0.37
SNED1-202ENST00000342631 FAM49BQ9NUQ9 324 aa17.33■□□□□ 0.37
SNED1-202ENST00000342631 INTUQ9ULD6 942 aa17.33■□□□□ 0.37
SNED1-202ENST00000342631 MYBPHLA2RUH7 354 aa17.33■□□□□ 0.36
SNED1-202ENST00000342631 ATP2C2O75185 946 aa17.33■□□□□ 0.36
SNED1-202ENST00000342631 MICAL2O94851 1124 aa17.33■□□□□ 0.36
SNED1-202ENST00000342631 BCAT1P54687 386 aa17.33■□□□□ 0.36
SNED1-202ENST00000342631 CENPCQ03188 943 aa17.33■□□□□ 0.36
SNED1-202ENST00000342631 PSMD5Q16401 504 aa17.33■□□□□ 0.36
SNED1-202ENST00000342631 PKDCCQ504Y2 493 aa17.33■□□□□ 0.36
SNED1-202ENST00000342631 SLC8B1Q6J4K2 584 aa17.33■□□□□ 0.36
SNED1-202ENST00000342631 ACAD10Q6JQN1 1059 aa17.33■□□□□ 0.36
SNED1-202ENST00000342631 TOGARAM2Q6ZUX3 1019 aa17.33■□□□□ 0.36
SNED1-202ENST00000342631 FUBP3Q96I24 572 aaKnown RBP eCLIP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms