RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 SCN4BQ8IWT1 228 aa14.09□□□□□ -0.15
TUBD1-202ENST00000340993 DCP1BQ8IZD4 617 aaKnown RBP14.09□□□□□ -0.15
TUBD1-202ENST00000340993 FAM200AQ8TCP9 573 aa14.09□□□□□ -0.15
TUBD1-202ENST00000340993 SMG7Q92540 1137 aaKnown RBP14.09□□□□□ -0.15
TUBD1-202ENST00000340993 TAF4BQ92750 862 aa14.09□□□□□ -0.15
TUBD1-202ENST00000340993 JAKMIP2Q96AA8 810 aa14.09□□□□□ -0.15
TUBD1-202ENST00000340993 MSLNLQ96KJ4 702 aa14.09□□□□□ -0.15
TUBD1-202ENST00000340993 VRTNQ9H8Y1 702 aa14.09□□□□□ -0.15
TUBD1-202ENST00000340993 SFXN1Q9H9B4 322 aa14.09□□□□□ -0.15
TUBD1-202ENST00000340993 CISHQ9NSE2 258 aa14.09□□□□□ -0.15
TUBD1-202ENST00000340993 AFF4Q9UHB7 1163 aaKnown RBP14.09□□□□□ -0.15
TUBD1-202ENST00000340993 USP15Q9Y4E8 981 aaPredicted RBP14.09□□□□□ -0.15
TUBD1-202ENST00000340993 MUC3AQ02505 3323 aa14.09□□□□□ -0.15
TUBD1-202ENST00000340993 SMTNL1A8MU46 457 aa14.09□□□□□ -0.15
TUBD1-202ENST00000340993 NCK2O43639 380 aa14.09□□□□□ -0.15
TUBD1-202ENST00000340993 TACC1O75410 805 aa14.09□□□□□ -0.15
TUBD1-202ENST00000340993 ABLIM3O94929 683 aa14.09□□□□□ -0.15
TUBD1-202ENST00000340993 LRG1P02750 347 aa14.09□□□□□ -0.15
TUBD1-202ENST00000340993 ATF2P15336 505 aa14.09□□□□□ -0.15
TUBD1-202ENST00000340993 BDNFP23560 247 aa14.09□□□□□ -0.15
TUBD1-202ENST00000340993 EEF1GP26641 437 aaKnown RBP14.09□□□□□ -0.15
TUBD1-202ENST00000340993 ADORA2BP29275 332 aa14.09□□□□□ -0.15
TUBD1-202ENST00000340993 IFRD2Q12894 506 aaPredicted RBP14.09□□□□□ -0.15
TUBD1-202ENST00000340993 GPR17Q13304 367 aa14.09□□□□□ -0.15
TUBD1-202ENST00000340993 CUL2Q13617 745 aa14.09□□□□□ -0.15
TUBD1-202ENST00000340993 DDR2Q16832 855 aa14.09□□□□□ -0.15
TUBD1-202ENST00000340993 EXOC3L4Q17RC7 722 aa14.09□□□□□ -0.15
TUBD1-202ENST00000340993 GBP6Q6ZN66 633 aa14.09□□□□□ -0.15
TUBD1-202ENST00000340993 GRASPQ7Z6J2 395 aaPredicted RBP14.09□□□□□ -0.15
TUBD1-202ENST00000340993 SPATA2LQ8IUW3 424 aaPredicted RBP14.09□□□□□ -0.15
TUBD1-202ENST00000340993 B3GALNT2Q8NCR0 500 aa14.09□□□□□ -0.15
TUBD1-202ENST00000340993 EHBP1Q8NDI1 1231 aa14.09□□□□□ -0.15
TUBD1-202ENST00000340993 LMO3Q8TAP4 145 aa14.09□□□□□ -0.15
TUBD1-202ENST00000340993 PCMTD1Q96MG8 357 aaPredicted RBP14.09□□□□□ -0.15
TUBD1-202ENST00000340993 ACBD6Q9BR61 282 aa14.09□□□□□ -0.15
TUBD1-202ENST00000340993 LSM14BQ9BX40 385 aaKnown RBP14.09□□□□□ -0.15
TUBD1-202ENST00000340993 BCO2Q9BYV7 579 aa14.09□□□□□ -0.15
TUBD1-202ENST00000340993 UBE2TQ9NPD8 197 aaPredicted RBP14.09□□□□□ -0.15
TUBD1-202ENST00000340993 AJAP1Q9UKB5 411 aaPredicted RBP14.09□□□□□ -0.15
TUBD1-202ENST00000340993 COG5Q9UP83 839 aa14.09□□□□□ -0.15
TUBD1-202ENST00000340993 COQ4Q9Y3A0 265 aa14.09□□□□□ -0.15
TUBD1-202ENST00000340993 YIPF1Q9Y548 306 aa14.09□□□□□ -0.15
TUBD1-202ENST00000340993 INSL5Q9Y5Q6 135 aa14.09□□□□□ -0.15
TUBD1-202ENST00000340993 TRIOO75962 3097 aa14.08□□□□□ -0.16
TUBD1-202ENST00000340993 TPM2P07951 284 aa14.08□□□□□ -0.16
TUBD1-202ENST00000340993 PNMA6AP0CW24 399 aaPredicted RBP14.08□□□□□ -0.16
TUBD1-202ENST00000340993 PTPN1P18031 435 aaKnown RBP14.08□□□□□ -0.16
TUBD1-202ENST00000340993 PAX3P23760 479 aa14.08□□□□□ -0.16
TUBD1-202ENST00000340993 USP8P40818 1118 aa14.08□□□□□ -0.16
TUBD1-202ENST00000340993 PHLDB3Q6NSJ2 640 aa14.08□□□□□ -0.16
TUBD1-202ENST00000340993 LRSAM1Q6UWE0 723 aa14.08□□□□□ -0.16
TUBD1-202ENST00000340993 LIMS2Q7Z4I7 341 aa14.08□□□□□ -0.16
TUBD1-202ENST00000340993 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.08□□□□□ -0.16
TUBD1-202ENST00000340993 SMRP1Q8NCR6 262 aa14.08□□□□□ -0.16
TUBD1-202ENST00000340993 ANKRD20A12PQ8NF67 263 aa14.08□□□□□ -0.16
TUBD1-202ENST00000340993 PCED1BQ96HM7 432 aa14.08□□□□□ -0.16
TUBD1-202ENST00000340993 NECAB3Q96P71 396 aaPredicted RBP14.08□□□□□ -0.16
TUBD1-202ENST00000340993 ZNF518BQ9C0D4 1074 aa14.08□□□□□ -0.16
TUBD1-202ENST00000340993 ELOVL4Q9GZR5 314 aa14.08□□□□□ -0.16
TUBD1-202ENST00000340993 DZANK1Q9NVP4 752 aa14.08□□□□□ -0.16
TUBD1-202ENST00000340993 CDH9Q9ULB4 789 aa14.08□□□□□ -0.16
TUBD1-202ENST00000340993 PCDHB4Q9Y5E5 795 aa14.08□□□□□ -0.16
TUBD1-202ENST00000340993 GOLGA6L19H0YKK7 550 aa14.07□□□□□ -0.16
TUBD1-202ENST00000340993 MBTPS2O43462 519 aa14.07□□□□□ -0.16
TUBD1-202ENST00000340993 ZMYND10O75800 440 aa14.07□□□□□ -0.16
TUBD1-202ENST00000340993 KRT5P13647 590 aa14.07□□□□□ -0.16
TUBD1-202ENST00000340993 ZNF18P17022 549 aa14.07□□□□□ -0.16
TUBD1-202ENST00000340993 PON1P27169 355 aa14.07□□□□□ -0.16
TUBD1-202ENST00000340993 CACNA2D1P54289 1103 aa14.07□□□□□ -0.16
TUBD1-202ENST00000340993 COL19A1Q14993 1142 aa14.07□□□□□ -0.16
TUBD1-202ENST00000340993 CES5AQ6NT32 575 aa14.07□□□□□ -0.16
TUBD1-202ENST00000340993 TRIM65Q6PJ69 517 aa14.07□□□□□ -0.16
TUBD1-202ENST00000340993 TMEM270Q6UE05 265 aa14.07□□□□□ -0.16
TUBD1-202ENST00000340993 GPR65Q8IYL9 337 aa14.07□□□□□ -0.16
TUBD1-202ENST00000340993 HS6ST3Q8IZP7 471 aa14.07□□□□□ -0.16
TUBD1-202ENST00000340993 ING5Q8WYH8 240 aa14.07□□□□□ -0.16
TUBD1-202ENST00000340993 BPIFA3Q9BQP9 254 aa14.07□□□□□ -0.16
TUBD1-202ENST00000340993 CORO1BQ9BR76 489 aa14.07□□□□□ -0.16
TUBD1-202ENST00000340993 S1PR5Q9H228 398 aa14.07□□□□□ -0.16
TUBD1-202ENST00000340993 PLEKHA4Q9H4M7 779 aa14.07□□□□□ -0.16
TUBD1-202ENST00000340993 MAGED2Q9UNF1 606 aaPredicted RBP14.07□□□□□ -0.16
TUBD1-202ENST00000340993 PCDHB5Q9Y5E4 795 aa14.07□□□□□ -0.16
TUBD1-202ENST00000340993 NOTCH4Q99466 2003 aa14.07□□□□□ -0.16
TUBD1-202ENST00000340993 CD19P15391 556 aa14.06□□□□□ -0.16
TUBD1-202ENST00000340993 PLCB2Q00722 1185 aa14.06□□□□□ -0.16
TUBD1-202ENST00000340993 UBXN1Q04323 297 aa14.06□□□□□ -0.16
TUBD1-202ENST00000340993 MTMR3Q13615 1198 aa14.06□□□□□ -0.16
TUBD1-202ENST00000340993 RAPGEF1Q13905 1077 aa14.06□□□□□ -0.16
TUBD1-202ENST00000340993 TPGS2Q68CL5 300 aa14.06□□□□□ -0.16
TUBD1-202ENST00000340993 TMEM184AQ6ZMB5 413 aa14.06□□□□□ -0.16
TUBD1-202ENST00000340993 CCDC149Q6ZUS6 474 aa14.06□□□□□ -0.16
TUBD1-202ENST00000340993 SLC2A14Q8TDB8 520 aa14.06□□□□□ -0.16
TUBD1-202ENST00000340993 WHAMMQ8TF30 809 aa14.06□□□□□ -0.16
TUBD1-202ENST00000340993 ZNF707Q96C28 371 aaPredicted RBP14.06□□□□□ -0.16
TUBD1-202ENST00000340993 RPGRIP1Q96KN7 1286 aa14.06□□□□□ -0.16
TUBD1-202ENST00000340993 HEXIM2Q96MH2 286 aaKnown RBP14.06□□□□□ -0.16
TUBD1-202ENST00000340993 KREMEN1Q96MU8 473 aa14.06□□□□□ -0.16
TUBD1-202ENST00000340993 PKMYT1Q99640 499 aa14.06□□□□□ -0.16
TUBD1-202ENST00000340993 B3GNT5Q9BYG0 378 aa14.06□□□□□ -0.16
TUBD1-202ENST00000340993 ADAM7Q9H2U9 754 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms