RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.6□□□□□ -1.19
NUP43-201ENST00000340413 SLC35G2Q8TBE7 412 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 RETREG1Q9H6L5 497 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 SMYD3Q9H7B4 428 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 HOMER3Q9NSC5 361 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 HESX1Q9UBX0 185 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 GUCA1BQ9UMX6 200 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 RWDD3Q9Y3V2 267 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 TNFRSF8P28908 595 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 PCK1P35558 622 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 GNL1P36915 607 aaPredicted RBP7.6□□□□□ -1.19
NUP43-201ENST00000340413 GPD2P43304 727 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 NDST1P52848 882 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 SEZ6Q53EL9 994 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 DNTTIP2Q5QJE6 756 aaKnown RBP7.6□□□□□ -1.19
NUP43-201ENST00000340413 LMBRD2Q68DH5 695 aaPredicted RBP7.6□□□□□ -1.19
NUP43-201ENST00000340413 SPOPLQ6IQ16 392 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 RTN4RL1Q86UN2 441 aaPredicted RBP7.6□□□□□ -1.19
NUP43-201ENST00000340413 DCP1BQ8IZD4 617 aaKnown RBP7.6□□□□□ -1.19
NUP43-201ENST00000340413 PDCL2Q8N4E4 241 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 MMGT1Q8N4V1 131 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 FEZF2Q8TBJ5 459 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 ZNF653Q96CK0 615 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 CASD1Q96PB1 797 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 HERC2P3Q9BVR0 1158 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 RC3H2Q9HBD1 1191 aaKnown RBP7.6□□□□□ -1.19
NUP43-201ENST00000340413 LZTFL1Q9NQ48 299 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 ADAM22Q9P0K1 906 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 POLIQ9UNA4 740 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.6□□□□□ -1.19
NUP43-201ENST00000340413 BACE2Q9Y5Z0 518 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 KIAA1671Q9BY89 1806 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 DYNC1I1O14576 645 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 MICAL2O94851 1124 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 HTR7P34969 479 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 PTPN9P43378 593 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 OSTNP61366 133 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 CYP27A1Q02318 531 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 MTFR1Q15390 333 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 RPS6KA1Q15418 735 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 CD300LGQ6UXG3 332 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 ZNF564Q8TBZ8 553 aaPredicted RBP7.59□□□□□ -1.19
NUP43-201ENST00000340413 ZNF689Q96CS4 500 aaPredicted RBP7.59□□□□□ -1.19
NUP43-201ENST00000340413 EHD2Q9NZN4 543 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 CNOT8Q9UFF9 292 aaKnown RBP7.59□□□□□ -1.19
NUP43-201ENST00000340413 PCDHA3Q9Y5H8 950 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 TMEM191CA6NGB0 347 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 CYB561D2O14569 222 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 POU2F2P09086 479 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 GBP1P32455 592 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 MLH1P40692 756 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 C4orf50Q6ZRC1 276 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 ERICH1Q86X53 443 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 MYCBPAPQ8TBZ2 947 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 FAM71BQ8TC56 605 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 SLC35F5Q8WV83 523 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 TEKT4Q8WW24 435 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 RABGGTAQ92696 567 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 SENP8Q96LD8 212 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 TBCBQ99426 244 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 DUSP16Q9BY84 665 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 RNF39Q9H2S5 420 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 IL23AQ9NPF7 189 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 L1RE1Q9UN81 338 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 ALPK3Q96L96 1907 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 CTSHP09668 335 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 FGFR3P22607 806 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 SOX4Q06945 474 aaPredicted RBP7.59□□□□□ -1.19
NUP43-201ENST00000340413 NFX1Q12986 1120 aaKnown RBP7.59□□□□□ -1.19
NUP43-201ENST00000340413 NFE2Q16621 373 aaPredicted RBP7.59□□□□□ -1.19
NUP43-201ENST00000340413 CFAP221Q4G0U5 840 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 RAB41Q5JT25 222 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 PSRC1Q6PGN9 363 aaPredicted RBP7.59□□□□□ -1.19
NUP43-201ENST00000340413 KATNAL2Q8IYT4 538 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 C12orf50Q8NA57 414 aaPredicted RBP7.59□□□□□ -1.19
NUP43-201ENST00000340413 WDR24Q96S15 920 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 GAD1Q99259 594 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 ARID3AQ99856 593 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 THAP2Q9H0W7 228 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 PDCL3Q9H2J4 239 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 LRFN2Q9ULH4 789 aa7.59□□□□□ -1.19
NUP43-201ENST00000340413 TTC3P53804 2025 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 HSPA1AP0DMV8 641 aaKnown RBP7.58□□□□□ -1.2
NUP43-201ENST00000340413 HSPA1BP0DMV9 641 aaKnown RBP7.58□□□□□ -1.2
NUP43-201ENST00000340413 LAG3P18627 525 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 AKAP5P24588 427 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 PPM1AP35813 382 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 USP8P40818 1118 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 INTS6LQ5JSJ4 861 aaKnown RBP7.58□□□□□ -1.2
NUP43-201ENST00000340413 EFHC1Q5JVL4 640 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 CLLU1OSQ5K130 101 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 VSTM1Q6UX27 236 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 RSRC2Q7L4I2 434 aaKnown RBP7.58□□□□□ -1.2
NUP43-201ENST00000340413 SLC26A9Q7LBE3 791 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 OVCA2Q8WZ82 227 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 C18orf8Q96DM3 657 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 OSBPL9Q96SU4 736 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 NUP85Q9BW27 656 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 TLR10Q9BXR5 811 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 ZCWPW1Q9H0M4 648 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms