RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 A0A1B0GUA9 196 aa11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 B4GALT5O43286 388 aa11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 CDH16O75309 829 aa11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 KRT1P04264 644 aa11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 HARSP12081 509 aaKnown RBP11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 SEC24CP53992 1094 aa11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 PTPN11Q06124 597 aaPredicted RBP11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 ITIH4Q14624 930 aa11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 HADHQ16836 314 aaKnown RBP11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 DCAF4L1Q3SXM0 396 aa11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 SCARA3Q6AZY7 606 aa11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 MFSD7Q6UXD7 560 aa11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 EXOC3L1Q86VI1 746 aa11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 XYLT1Q86Y38 959 aa11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 CMASQ8NFW8 434 aaPredicted RBP11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 TMEM176AQ96HP8 235 aa11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 NLRP4Q96MN2 994 aa11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 RNPEPQ9H4A4 650 aa11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 ACTR5Q9H9F9 607 aaPredicted RBP11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 SPON1Q9HCB6 807 aa11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 DDX20Q9UHI6 824 aaKnown RBP11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 CITO14578 2027 aa11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 LACTBL1A8MY62 500 aa11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 SETSIPP0DME0 302 aa11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 CXCL8P10145 99 aa11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 GHRP10912 638 aa11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 KRT3P12035 628 aa11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 CHN1P15882 459 aa11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 GJA5P36382 358 aa11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 GRM5P41594 1212 aa11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 GKAP1Q5VSY0 366 aaPredicted RBP11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 IZUMO3Q5VZ72 239 aa11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 APBB1IPQ7Z5R6 666 aaPredicted RBP11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 EPS8L3Q8TE67 593 aaKnown RBP11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 CCDC114Q96M63 670 aa11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 CCDC77Q9BR77 488 aa11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 PPANQ9NQ55 473 aaKnown RBP11.3□□□□□ -0.6
TRAF3IP2-201ENST00000340026 F8VP50 259 aa11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 LRCH4O75427 683 aa11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 KIAA0754O94854 1291 aa11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 CD58P19256 250 aa11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 EPHX2P34913 555 aa11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 GPD2P43304 727 aa11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 CLCN3P51790 818 aa11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 SNX1Q13596 522 aa11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 SLC10A6Q3KNW5 377 aa11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 C2CD6Q53TS8 623 aa11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 DPY19L2Q6NUT2 758 aa11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 DENND1BQ6P3S1 775 aa11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 MTHFD1LQ6UB35 978 aa11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 ANKRD23Q86SG2 305 aa11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 CFAP57Q96MR6 1250 aa11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 TPX2Q9ULW0 747 aaKnown RBP11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 BARX2Q9UMQ3 279 aaPredicted RBP11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 FARP1Q9Y4F1 1045 aaPredicted RBP11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 DPYSL4O14531 572 aa11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 NFICP08651 508 aa11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 FKBP1BP68106 108 aa11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 IFI35P80217 286 aaPredicted RBP11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 RNASEH2BQ5TBB1 312 aaKnown RBP11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 JADE1Q6IE81 842 aa11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 LCLAT1Q6UWP7 414 aa11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 ILDR2Q71H61 639 aa11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 ARCQ7LC44 396 aa11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 CEP120Q8N960 986 aa11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 COPS5Q92905 334 aa11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 SEC16BQ96JE7 1060 aa11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 SDCBP2Q9H190 292 aa11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 PDGFCQ9NRA1 345 aa11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 INTS9Q9NV88 658 aaKnown RBP11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 CYTH4Q9UIA0 394 aa11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 DNPEPQ9ULA0 475 aa11.29□□□□□ -0.6
TRAF3IP2-201ENST00000340026 ALOX15BO15296 676 aa11.28□□□□□ -0.6
TRAF3IP2-201ENST00000340026 CETPP11597 493 aa11.28□□□□□ -0.6
TRAF3IP2-201ENST00000340026 RFC1P35251 1148 aaPredicted RBP11.28□□□□□ -0.6
TRAF3IP2-201ENST00000340026 SCNN1AP37088 669 aa11.28□□□□□ -0.6
TRAF3IP2-201ENST00000340026 RBP5P82980 135 aa11.28□□□□□ -0.6
TRAF3IP2-201ENST00000340026 MKRN3Q13064 507 aaKnown RBP11.28□□□□□ -0.6
TRAF3IP2-201ENST00000340026 GRB14Q14449 540 aa11.28□□□□□ -0.6
TRAF3IP2-201ENST00000340026 DLK2Q6UY11 383 aa11.28□□□□□ -0.6
TRAF3IP2-201ENST00000340026 CACNA2D3Q8IZS8 1091 aa11.28□□□□□ -0.6
TRAF3IP2-201ENST00000340026 ARFGAP1Q8N6T3 406 aa11.28□□□□□ -0.6
TRAF3IP2-201ENST00000340026 STK32AQ8WU08 396 aa11.28□□□□□ -0.6
TRAF3IP2-201ENST00000340026 HEMGNQ9BXL5 484 aa11.28□□□□□ -0.6
TRAF3IP2-201ENST00000340026 KDM4CQ9H3R0 1056 aa11.28□□□□□ -0.6
TRAF3IP2-201ENST00000340026 SENP1Q9P0U3 644 aa11.28□□□□□ -0.6
TRAF3IP2-201ENST00000340026 RRN3P2A6NIE6 340 aa11.28□□□□□ -0.6
TRAF3IP2-201ENST00000340026 E7ESA3 106 aa11.28□□□□□ -0.6
TRAF3IP2-201ENST00000340026 TRIM66O15016 1216 aa11.28□□□□□ -0.6
TRAF3IP2-201ENST00000340026 TSPAN1O60635 241 aa11.28□□□□□ -0.6
TRAF3IP2-201ENST00000340026 ARF4P18085 180 aaPredicted RBP11.28□□□□□ -0.6
TRAF3IP2-201ENST00000340026 KDELR1P24390 212 aa11.28□□□□□ -0.6
TRAF3IP2-201ENST00000340026 TMEM132DQ14C87 1099 aa11.28□□□□□ -0.6
TRAF3IP2-201ENST00000340026 WDR72Q3MJ13 1102 aa11.28□□□□□ -0.6
TRAF3IP2-201ENST00000340026 DUSP28Q4G0W2 176 aa11.28□□□□□ -0.6
TRAF3IP2-201ENST00000340026 TRAPPC12Q8WVT3 735 aa11.28□□□□□ -0.6
TRAF3IP2-201ENST00000340026 DDX23Q9BUQ8 820 aaKnown RBP11.28□□□□□ -0.6
TRAF3IP2-201ENST00000340026 ELOVL4Q9GZR5 314 aa11.28□□□□□ -0.6
TRAF3IP2-201ENST00000340026 NSRP1Q9H0G5 558 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms