RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 ADAM17P78536 824 aa16.34■□□□□ 0.21
MBD1-203ENST00000339998 KRT17Q04695 432 aa16.34■□□□□ 0.21
MBD1-203ENST00000339998 NNTQ13423 1086 aa16.34■□□□□ 0.21
MBD1-203ENST00000339998 OSBPL8Q9BZF1 889 aa16.34■□□□□ 0.21
MBD1-203ENST00000339998 AP5M1Q9H0R1 490 aa16.34■□□□□ 0.21
MBD1-203ENST00000339998 RAB17Q9H0T7 212 aa16.34■□□□□ 0.21
MBD1-203ENST00000339998 PCDHGC3Q9UN70 934 aa16.34■□□□□ 0.21
MBD1-203ENST00000339998 MBLAC1A4D2B0 266 aaPredicted RBP16.34■□□□□ 0.21
MBD1-203ENST00000339998 CALB1P05937 261 aa16.34■□□□□ 0.21
MBD1-203ENST00000339998 PDGFRBP09619 1106 aa16.34■□□□□ 0.21
MBD1-203ENST00000339998 CAPN2P17655 700 aa16.34■□□□□ 0.21
MBD1-203ENST00000339998 DYNLT1P63172 113 aa16.34■□□□□ 0.21
MBD1-203ENST00000339998 RBP5P82980 135 aa16.34■□□□□ 0.21
MBD1-203ENST00000339998 SOX4Q06945 474 aaPredicted RBP16.34■□□□□ 0.21
MBD1-203ENST00000339998 GNASQ5JWF2 1037 aa16.34■□□□□ 0.21
MBD1-203ENST00000339998 PPP1R15BQ5SWA1 713 aa16.34■□□□□ 0.21
MBD1-203ENST00000339998 BCCIPQ9P287 314 aaKnown RBP eCLIP16.34■□□□□ 0.21
MBD1-203ENST00000339998 SMIM23A6NLE4 172 aa16.33■□□□□ 0.21
MBD1-203ENST00000339998 DCDC2CA8MYV0 355 aa16.33■□□□□ 0.21
MBD1-203ENST00000339998 KRT1P04264 644 aa16.33■□□□□ 0.21
MBD1-203ENST00000339998 CD48P09326 243 aa16.33■□□□□ 0.21
MBD1-203ENST00000339998 KRT3P12035 628 aa16.33■□□□□ 0.21
MBD1-203ENST00000339998 DHX34Q14147 1143 aaKnown RBP16.33■□□□□ 0.21
MBD1-203ENST00000339998 PPP1R26Q5T8A7 1209 aaPredicted RBP16.33■□□□□ 0.21
MBD1-203ENST00000339998 ALS2CLQ60I27 953 aa16.33■□□□□ 0.21
MBD1-203ENST00000339998 ZFP42Q96MM3 310 aa16.33■□□□□ 0.21
MBD1-203ENST00000339998 FAM114A2Q9NRY5 505 aa16.33■□□□□ 0.21
MBD1-203ENST00000339998 TSPAN16Q9UKR8 245 aa16.33■□□□□ 0.21
MBD1-203ENST00000339998 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.33■□□□□ 0.21
MBD1-203ENST00000339998 CEP83Q9Y592 693 aa16.33■□□□□ 0.21
MBD1-203ENST00000339998 FAM155AB1AL88 458 aaPredicted RBP16.33■□□□□ 0.2
MBD1-203ENST00000339998 H0YGN5 161 aa16.33■□□□□ 0.2
MBD1-203ENST00000339998 SPTLC1O15269 473 aa16.33■□□□□ 0.2
MBD1-203ENST00000339998 TP73O15350 636 aa16.33■□□□□ 0.2
MBD1-203ENST00000339998 PSMA2P25787 234 aa16.33■□□□□ 0.2
MBD1-203ENST00000339998 RGS2P41220 211 aa16.33■□□□□ 0.2
MBD1-203ENST00000339998 GPD2P43304 727 aa16.33■□□□□ 0.2
MBD1-203ENST00000339998 CYP1B1Q16678 543 aa16.33■□□□□ 0.2
MBD1-203ENST00000339998 XYLT1Q86Y38 959 aa16.33■□□□□ 0.2
MBD1-203ENST00000339998 MREGQ8N565 214 aa16.33■□□□□ 0.2
MBD1-203ENST00000339998 C7orf31Q8N865 590 aa16.33■□□□□ 0.2
MBD1-203ENST00000339998 SNX27Q96L92 541 aa16.33■□□□□ 0.2
MBD1-203ENST00000339998 SEMA4AQ9H3S1 761 aa16.33■□□□□ 0.2
MBD1-203ENST00000339998 IP6K2Q9UHH9 426 aa16.33■□□□□ 0.2
MBD1-203ENST00000339998 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.33■□□□□ 0.2
MBD1-203ENST00000339998 NFS1Q9Y697 457 aa16.33■□□□□ 0.2
MBD1-203ENST00000339998 SMIM35A0A1B0GVV1 85 aa16.32■□□□□ 0.2
MBD1-203ENST00000339998 LRRD1A4D1F6 860 aa16.32■□□□□ 0.2
MBD1-203ENST00000339998 LSM8O95777 96 aaKnown RBP16.32■□□□□ 0.2
MBD1-203ENST00000339998 ZSCAN5DPP0CG00 497 aa16.32■□□□□ 0.2
MBD1-203ENST00000339998 ETS1P14921 441 aa16.32■□□□□ 0.2
MBD1-203ENST00000339998 PURAQ00577 322 aaKnown RBP16.32■□□□□ 0.2
MBD1-203ENST00000339998 KLF1Q13351 362 aaPredicted RBP16.32■□□□□ 0.2
MBD1-203ENST00000339998 NOTUMQ6P988 496 aa16.32■□□□□ 0.2
MBD1-203ENST00000339998 FOXR1Q6PIV2 292 aa16.32■□□□□ 0.2
MBD1-203ENST00000339998 TAB3Q8N5C8 712 aaPredicted RBP16.32■□□□□ 0.2
MBD1-203ENST00000339998 C3orf20Q8ND61 904 aa16.32■□□□□ 0.2
MBD1-203ENST00000339998 TRIB2Q92519 343 aa16.32■□□□□ 0.2
MBD1-203ENST00000339998 EXOC4Q96A65 974 aa16.32■□□□□ 0.2
MBD1-203ENST00000339998 B3GNT5Q9BYG0 378 aa16.32■□□□□ 0.2
MBD1-203ENST00000339998 DCLK3Q9C098 648 aa16.32■□□□□ 0.2
MBD1-203ENST00000339998 ASIC3Q9UHC3 531 aa16.32■□□□□ 0.2
MBD1-203ENST00000339998 C2CD2Q9Y426 696 aa16.32■□□□□ 0.2
MBD1-203ENST00000339998 E5RJQ4 531 aa16.32■□□□□ 0.2
MBD1-203ENST00000339998 ECEL1O95672 775 aa16.32■□□□□ 0.2
MBD1-203ENST00000339998 LMO2P25791 158 aa16.32■□□□□ 0.2
MBD1-203ENST00000339998 CDH5P33151 784 aaPredicted RBP16.32■□□□□ 0.2
MBD1-203ENST00000339998 YWHAEP62258 255 aaKnown RBP16.32■□□□□ 0.2
MBD1-203ENST00000339998 ZNF844Q08AG5 666 aa16.32■□□□□ 0.2
MBD1-203ENST00000339998 NFX1Q12986 1120 aaKnown RBP16.32■□□□□ 0.2
MBD1-203ENST00000339998 PDCLQ13371 301 aa16.32■□□□□ 0.2
MBD1-203ENST00000339998 CDO1Q16878 200 aa16.32■□□□□ 0.2
MBD1-203ENST00000339998 FAM47CQ5HY64 1035 aa16.32■□□□□ 0.2
MBD1-203ENST00000339998 TRNP1Q6NT89 227 aa16.32■□□□□ 0.2
MBD1-203ENST00000339998 FAM76AQ8TAV0 307 aa16.32■□□□□ 0.2
MBD1-203ENST00000339998 EPB41L4BQ9H329 900 aa16.32■□□□□ 0.2
MBD1-203ENST00000339998 LRRC19Q9H756 370 aa16.32■□□□□ 0.2
MBD1-203ENST00000339998 BARX2Q9UMQ3 279 aaPredicted RBP16.32■□□□□ 0.2
MBD1-203ENST00000339998 FAM187AA6NFU0 413 aa16.32■□□□□ 0.2
MBD1-203ENST00000339998 HAS3O00219 553 aa16.32■□□□□ 0.2
MBD1-203ENST00000339998 SLC10A3P09131 477 aa16.32■□□□□ 0.2
MBD1-203ENST00000339998 HPDP32754 393 aaPredicted RBP16.32■□□□□ 0.2
MBD1-203ENST00000339998 CYP4F22Q6NT55 531 aa16.32■□□□□ 0.2
MBD1-203ENST00000339998 APBA2Q99767 749 aa16.32■□□□□ 0.2
MBD1-203ENST00000339998 ITGA11Q9UKX5 1188 aa16.32■□□□□ 0.2
MBD1-203ENST00000339998 LRCH4O75427 683 aa16.31■□□□□ 0.2
MBD1-203ENST00000339998 PFKMP08237 780 aa16.31■□□□□ 0.2
MBD1-203ENST00000339998 CHKAP35790 457 aa16.31■□□□□ 0.2
MBD1-203ENST00000339998 CPT1AP50416 773 aa16.31■□□□□ 0.2
MBD1-203ENST00000339998 C15orf59Q2T9L4 293 aaPredicted RBP16.31■□□□□ 0.2
MBD1-203ENST00000339998 UBXN11Q5T124 520 aa16.31■□□□□ 0.2
MBD1-203ENST00000339998 OR6B3Q8NGW1 331 aa16.31■□□□□ 0.2
MBD1-203ENST00000339998 SLITRK1Q96PX8 696 aa16.31■□□□□ 0.2
MBD1-203ENST00000339998 ZMYND15Q9H091 742 aa16.31■□□□□ 0.2
MBD1-203ENST00000339998 ZFYVE28Q9HCC9 887 aa16.31■□□□□ 0.2
MBD1-203ENST00000339998 SMIM28A0A1B0GU29 152 aa16.31■□□□□ 0.2
MBD1-203ENST00000339998 C17orf102A2RUQ5 167 aa16.31■□□□□ 0.2
MBD1-203ENST00000339998 PSTPIP1O43586 416 aa16.31■□□□□ 0.2
MBD1-203ENST00000339998 FGFR1P11362 822 aa16.31■□□□□ 0.2
MBD1-203ENST00000339998 HSPA6P17066 643 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms