RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 SNPHO15079 494 aa11.46□□□□□ -0.57
CAPN3-202ENST00000337571 PRPF6O94906 941 aaKnown RBP11.46□□□□□ -0.57
CAPN3-202ENST00000337571 HSP90AA1P07900 732 aaKnown RBP11.46□□□□□ -0.57
CAPN3-202ENST00000337571 CSH1P0DML2 217 aa11.46□□□□□ -0.57
CAPN3-202ENST00000337571 CSH2P0DML3 217 aa11.46□□□□□ -0.57
CAPN3-202ENST00000337571 CHRNB1P11230 501 aa11.46□□□□□ -0.57
CAPN3-202ENST00000337571 ATF6P18850 670 aa11.46□□□□□ -0.57
CAPN3-202ENST00000337571 DDX6P26196 483 aaKnown RBP eCLIP11.46□□□□□ -0.57
CAPN3-202ENST00000337571 WEE1P30291 646 aa11.46□□□□□ -0.57
CAPN3-202ENST00000337571 LHX1P48742 406 aa11.46□□□□□ -0.57
CAPN3-202ENST00000337571 CASP5P51878 434 aa11.46□□□□□ -0.57
CAPN3-202ENST00000337571 CYP4F8P98187 520 aa11.46□□□□□ -0.57
CAPN3-202ENST00000337571 AMPD2Q01433 879 aa11.46□□□□□ -0.57
CAPN3-202ENST00000337571 DGKKQ5KSL6 1271 aa11.46□□□□□ -0.57
CAPN3-202ENST00000337571 CC2D1AQ6P1N0 951 aaPredicted RBP11.46□□□□□ -0.57
CAPN3-202ENST00000337571 ZNF687Q8N1G0 1237 aa11.46□□□□□ -0.57
CAPN3-202ENST00000337571 GPD1LQ8N335 351 aa11.46□□□□□ -0.57
CAPN3-202ENST00000337571 PDCL2Q8N4E4 241 aa11.46□□□□□ -0.57
CAPN3-202ENST00000337571 LRRC52Q8N7C0 313 aa11.46□□□□□ -0.57
CAPN3-202ENST00000337571 IQUBQ8NA54 791 aa11.46□□□□□ -0.57
CAPN3-202ENST00000337571 TTC8Q8TAM2 541 aa11.46□□□□□ -0.57
CAPN3-202ENST00000337571 MRPS31Q92665 395 aaKnown RBP11.46□□□□□ -0.57
CAPN3-202ENST00000337571 RSPRY1Q96DX4 576 aa11.46□□□□□ -0.57
CAPN3-202ENST00000337571 ANKRD36BP1Q96IX9 119 aa11.46□□□□□ -0.57
CAPN3-202ENST00000337571 ZFYVE19Q96K21 471 aa11.46□□□□□ -0.57
CAPN3-202ENST00000337571 ACBD6Q9BR61 282 aa11.46□□□□□ -0.57
CAPN3-202ENST00000337571 PI4K2AQ9BTU6 479 aa11.46□□□□□ -0.57
CAPN3-202ENST00000337571 SLC46A2Q9BY10 475 aa11.46□□□□□ -0.57
CAPN3-202ENST00000337571 CUEDC2Q9H467 287 aa11.46□□□□□ -0.57
CAPN3-202ENST00000337571 KIAA1586Q9HCI6 787 aa11.46□□□□□ -0.57
CAPN3-202ENST00000337571 PRMT8Q9NR22 394 aaPredicted RBP11.46□□□□□ -0.57
CAPN3-202ENST00000337571 DDX43Q9NXZ2 648 aaKnown RBP11.46□□□□□ -0.57
CAPN3-202ENST00000337571 GTSE1Q9NYZ3 720 aa11.46□□□□□ -0.57
CAPN3-202ENST00000337571 TFIP11Q9UBB9 837 aaKnown RBP11.46□□□□□ -0.57
CAPN3-202ENST00000337571 UXTQ9UBK9 157 aaPredicted RBP11.46□□□□□ -0.57
CAPN3-202ENST00000337571 MAGED2Q9UNF1 606 aaPredicted RBP11.46□□□□□ -0.57
CAPN3-202ENST00000337571 SNX9Q9Y5X1 595 aa11.46□□□□□ -0.57
CAPN3-202ENST00000337571 NUP210Q8TEM1 1887 aaPredicted RBP11.46□□□□□ -0.58
CAPN3-202ENST00000337571 ZNF638Q14966 1978 aaKnown RBP11.45□□□□□ -0.58
CAPN3-202ENST00000337571 RIF1Q5UIP0 2472 aaKnown RBP11.45□□□□□ -0.58
CAPN3-202ENST00000337571 FAM186AA6NE01 2351 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 TSC2P49815 1807 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 FRMD3A2A2Y4 597 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 SHISA7A6NL88 538 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 SOBPA7XYQ1 873 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 SPECC1L-ADORA2AF8WAN1 911 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 ARNTLO00327 626 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 SPTLC2O15270 562 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 LILRB5O75023 590 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 PPP6R2O75170 966 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 TNNC2P02585 160 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 PDIA4P13667 645 aaKnown RBP11.45□□□□□ -0.58
CAPN3-202ENST00000337571 SDHBP21912 280 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 PCSK1P29120 753 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 NLRP12P59046 1061 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 DUOXA2Q1HG44 320 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 ITPRIPL2Q3MIP1 535 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 SPATA2LQ8IUW3 424 aaPredicted RBP11.45□□□□□ -0.58
CAPN3-202ENST00000337571 CMTM8Q8IZV2 173 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 SPEM1Q8N4L4 309 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 TOP6BLQ8N6T0 577 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 MAB21L3Q8N8X9 362 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 C1orf127Q8N9H9 656 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 LINC00301Q8NCQ3 95 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 NELL1Q92832 810 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 CBWD1Q9BRT8 395 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 MKNK1Q9BUB5 465 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 BACH2Q9BYV9 841 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 EPC1Q9H2F5 836 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 TNMDQ9H2S6 317 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 PDE11AQ9HCR9 933 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 ABCB6Q9NP58 842 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 GDAP2Q9NXN4 497 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 GMEB2Q9UKD1 530 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 DCHS1Q96JQ0 3298 aa11.45□□□□□ -0.58
CAPN3-202ENST00000337571 A0A087X0B3 334 aa11.44□□□□□ -0.58
CAPN3-202ENST00000337571 MYBPHLA2RUH7 354 aa11.44□□□□□ -0.58
CAPN3-202ENST00000337571 CTHP32929 405 aa11.44□□□□□ -0.58
CAPN3-202ENST00000337571 SOX9P48436 509 aa11.44□□□□□ -0.58
CAPN3-202ENST00000337571 NASPP49321 788 aaPredicted RBP11.44□□□□□ -0.58
CAPN3-202ENST00000337571 ASIC1P78348 528 aa11.44□□□□□ -0.58
CAPN3-202ENST00000337571 PUM1Q14671 1186 aaKnown RBP eCLIP11.44□□□□□ -0.58
CAPN3-202ENST00000337571 INTS6LQ5JSJ4 861 aaKnown RBP11.44□□□□□ -0.58
CAPN3-202ENST00000337571 DPH6Q7L8W6 267 aa11.44□□□□□ -0.58
CAPN3-202ENST00000337571 DGLUCYQ7Z3D6 616 aa11.44□□□□□ -0.58
CAPN3-202ENST00000337571 SYNPOQ8N3V7 929 aa11.44□□□□□ -0.58
CAPN3-202ENST00000337571 FSIP1Q8NA03 581 aa11.44□□□□□ -0.58
CAPN3-202ENST00000337571 ZSWIM2Q8NEG5 633 aa11.44□□□□□ -0.58
CAPN3-202ENST00000337571 SPATA18Q8TC71 538 aa11.44□□□□□ -0.58
CAPN3-202ENST00000337571 EXOC4Q96A65 974 aa11.44□□□□□ -0.58
CAPN3-202ENST00000337571 DHX58Q96C10 678 aa11.44□□□□□ -0.58
CAPN3-202ENST00000337571 HPDLQ96IR7 371 aa11.44□□□□□ -0.58
CAPN3-202ENST00000337571 LRRC3BQ96PB8 259 aa11.44□□□□□ -0.58
CAPN3-202ENST00000337571 SMG9Q9H0W8 520 aaKnown RBP11.44□□□□□ -0.58
CAPN3-202ENST00000337571 IL21Q9HBE4 155 aa11.44□□□□□ -0.58
CAPN3-202ENST00000337571 GKN1Q9NS71 199 aa11.44□□□□□ -0.58
CAPN3-202ENST00000337571 TDP1Q9NUW8 608 aa11.44□□□□□ -0.58
CAPN3-202ENST00000337571 GTF3C4Q9UKN8 822 aa11.44□□□□□ -0.58
CAPN3-202ENST00000337571 L1RE1Q9UN81 338 aa11.44□□□□□ -0.58
CAPN3-202ENST00000337571 SMG5Q9UPR3 1016 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms