RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 EVX2Q03828 476 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 HABP4Q5JVS0 413 aaKnown RBP13.84□□□□□ -0.19
COL2A1-201ENST00000337299 LNX1Q8TBB1 728 aaPredicted RBP13.84□□□□□ -0.19
COL2A1-201ENST00000337299 DHX38Q92620 1227 aaKnown RBP13.84□□□□□ -0.19
COL2A1-201ENST00000337299 EXT2Q93063 718 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 C10orf88Q9H8K7 445 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 SOX13Q9UN79 622 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 RBMX2Q9Y388 322 aaKnown RBP13.84□□□□□ -0.19
COL2A1-201ENST00000337299 SNX13Q9Y5W8 968 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 KDM6AO15550 1401 aaPredicted RBP13.84□□□□□ -0.19
COL2A1-201ENST00000337299 BANF1O75531 89 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 FAM58BPP0C7Q3 252 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 CASP5P51878 434 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 KIF19Q2TAC6 998 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 IRF2BP2Q7Z5L9 587 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 DRAXINQ8NBI3 349 aaPredicted RBP13.84□□□□□ -0.19
COL2A1-201ENST00000337299 GSTCDQ8NEC7 633 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 HES6Q96HZ4 224 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 ESYT2A0FGR8 921 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 WFS1O76024 890 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 RBP3P10745 1247 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 GPSM2P81274 684 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 NFX1Q12986 1120 aaKnown RBP13.84□□□□□ -0.19
COL2A1-201ENST00000337299 ABCB5Q2M3G0 1257 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 RFWD2Q8NHY2 731 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 TBC1D16Q8TBP0 767 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 DDI1Q8WTU0 396 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 MCEEQ96PE7 176 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 PHACTR1Q9C0D0 580 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 IP6K2Q9UHH9 426 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 TMCO1Q9UM00 188 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 SH3BP1Q9Y3L3 701 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 V9GYQ6 96 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 MROH7Q68CQ1 1323 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 C1orf232A0A0U1RR37 186 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 EDF1O60869 148 aaKnown RBP13.84□□□□□ -0.19
COL2A1-201ENST00000337299 NTSR2O95665 410 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 EYA4O95677 639 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 DAB2P98082 770 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 NRF1Q16656 503 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 HAUS6Q7Z4H7 955 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 ZBTB33Q86T24 672 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 ALYREFQ86V81 257 aaKnown RBP13.84□□□□□ -0.19
COL2A1-201ENST00000337299 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.84□□□□□ -0.19
COL2A1-201ENST00000337299 TTC13Q8NBP0 860 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 DIS3LQ8TF46 1054 aaKnown RBP13.84□□□□□ -0.19
COL2A1-201ENST00000337299 RNF34Q969K3 372 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 GANQ9H2C0 597 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 TDRD3Q9H7E2 651 aaKnown RBP13.84□□□□□ -0.19
COL2A1-201ENST00000337299 KIAA1586Q9HCI6 787 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 MST1RQ04912 1400 aa13.83□□□□□ -0.19
COL2A1-201ENST00000337299 DENND3A2RUS2 1198 aa13.83□□□□□ -0.2
COL2A1-201ENST00000337299 SYCE1LA8MT33 242 aa13.83□□□□□ -0.2
COL2A1-201ENST00000337299 ANKRD63C9JTQ0 380 aa13.83□□□□□ -0.2
COL2A1-201ENST00000337299 PIK3R2O00459 728 aa13.83□□□□□ -0.2
COL2A1-201ENST00000337299 CALCAP01258 141 aa13.83□□□□□ -0.2
COL2A1-201ENST00000337299 SLC1A1P43005 524 aa13.83□□□□□ -0.2
COL2A1-201ENST00000337299 NCKAP1LP55160 1127 aa13.83□□□□□ -0.2
COL2A1-201ENST00000337299 SNX16P57768 344 aa13.83□□□□□ -0.2
COL2A1-201ENST00000337299 KLRC3Q07444 240 aa13.83□□□□□ -0.2
COL2A1-201ENST00000337299 ORC2Q13416 577 aaPredicted RBP13.83□□□□□ -0.2
COL2A1-201ENST00000337299 ACSBG2Q5FVE4 666 aa13.83□□□□□ -0.2
COL2A1-201ENST00000337299 TMEM35BQ8NCS4 154 aa13.83□□□□□ -0.2
COL2A1-201ENST00000337299 NEDD1Q8NHV4 660 aa13.83□□□□□ -0.2
COL2A1-201ENST00000337299 ZNF512BQ96KM6 892 aaPredicted RBP13.83□□□□□ -0.2
COL2A1-201ENST00000337299 PLA2G12BQ9BX93 195 aa13.83□□□□□ -0.2
COL2A1-201ENST00000337299 HSPBP1Q9NZL4 362 aa13.83□□□□□ -0.2
COL2A1-201ENST00000337299 TBX10O75333 385 aa13.83□□□□□ -0.2
COL2A1-201ENST00000337299 ETS1P14921 441 aa13.83□□□□□ -0.2
COL2A1-201ENST00000337299 CHN2P52757 468 aa13.83□□□□□ -0.2
COL2A1-201ENST00000337299 VCPP55072 806 aaKnown RBP13.83□□□□□ -0.2
COL2A1-201ENST00000337299 MRPS22P82650 360 aaKnown RBP13.83□□□□□ -0.2
COL2A1-201ENST00000337299 ROR1Q01973 937 aa13.83□□□□□ -0.2
COL2A1-201ENST00000337299 PPATQ06203 517 aa13.83□□□□□ -0.2
COL2A1-201ENST00000337299 PDK4Q16654 411 aa13.83□□□□□ -0.2
COL2A1-201ENST00000337299 POTEAQ6S8J7 498 aa13.83□□□□□ -0.2
COL2A1-201ENST00000337299 GIPC3Q8TF64 312 aa13.83□□□□□ -0.2
COL2A1-201ENST00000337299 KAT5Q92993 513 aa13.83□□□□□ -0.2
COL2A1-201ENST00000337299 LXNQ9BS40 222 aa13.83□□□□□ -0.2
COL2A1-201ENST00000337299 SEPT9Q9UHD8 586 aaPredicted RBP13.83□□□□□ -0.2
COL2A1-201ENST00000337299 LSM1O15116 133 aaKnown RBP13.83□□□□□ -0.2
COL2A1-201ENST00000337299 CHRNA5P30532 468 aa13.83□□□□□ -0.2
COL2A1-201ENST00000337299 CDH6P55285 790 aa13.83□□□□□ -0.2
COL2A1-201ENST00000337299 RPL10AP62906 217 aaKnown RBP13.83□□□□□ -0.2
COL2A1-201ENST00000337299 EN1Q05925 392 aaPredicted RBP13.83□□□□□ -0.2
COL2A1-201ENST00000337299 KCNT1Q5JUK3 1230 aa13.83□□□□□ -0.2
COL2A1-201ENST00000337299 ZNF772Q68DY9 489 aaPredicted RBP13.83□□□□□ -0.2
COL2A1-201ENST00000337299 TLDC1Q6P9B6 456 aa13.83□□□□□ -0.2
COL2A1-201ENST00000337299 SATL1Q86VE3 508 aa13.83□□□□□ -0.2
COL2A1-201ENST00000337299 LZICQ8WZA0 190 aa13.83□□□□□ -0.2
COL2A1-201ENST00000337299 AGPAT3Q9NRZ7 376 aa13.83□□□□□ -0.2
COL2A1-201ENST00000337299 MYH8P13535 1937 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 PIK3CDO00329 1044 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 KCNN4O15554 427 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 ADCY6O43306 1168 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 RFX1P22670 979 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 VPS72Q15906 364 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 FAM149B1Q96BN6 582 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 FOXP3Q9BZS1 431 aa13.82□□□□□ -0.2
COL2A1-201ENST00000337299 COPS7BQ9H9Q2 264 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms