RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 NCAM1P13591 858 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 RXRGP48443 463 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 DAGLBQ8NCG7 672 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 RNF25Q96BH1 459 aaPredicted RBP12.78□□□□□ -0.36
FN1-202ENST00000336916 UBE2OQ9C0C9 1292 aaKnown RBP12.78□□□□□ -0.36
FN1-202ENST00000336916 WARS2Q9UGM6 360 aaKnown RBP12.78□□□□□ -0.36
FN1-202ENST00000336916 MOCS2O96007 188 aaPredicted RBP12.78□□□□□ -0.36
FN1-202ENST00000336916 ZDHHC17Q8IUH5 632 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 GRID1Q9ULK0 1009 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 TBX20Q9UMR3 447 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 CHMP2BQ9UQN3 213 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 FHOD1Q9Y613 1164 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 AXLP30530 894 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 C10orf120Q5SQS8 335 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 FAM182BQ5T319 152 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 CYFIP2Q96F07 1278 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 GMCL1Q96IK5 515 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 KCNK16Q96T55 309 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 PHF20Q9BVI0 1012 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 SMYD3Q9H7B4 428 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 ACADMP11310 421 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 TMCO4Q5TGY1 634 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 GMCL1P1Q8NEA9 526 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 MAN1C1Q9NR34 630 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.78□□□□□ -0.36
FN1-202ENST00000336916 KANSL1LA0AUZ9 987 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 RTN3O95197 1032 aaPredicted RBP12.78□□□□□ -0.36
FN1-202ENST00000336916 THP07101 528 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 MLNP12872 115 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 NAB2Q15742 525 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 TFDP3Q5H9I0 405 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 ENOPH1Q9UHY7 261 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 A0A0G2JLW4 131 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 HEATR9A2RTY3 570 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 GRAMD4Q6IC98 578 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 FBXO33Q7Z6M2 555 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 PLEKHH3Q7Z736 793 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 HEMGNQ9BXL5 484 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 SYTL2Q9HCH5 934 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 AFF4Q9UHB7 1163 aaKnown RBP12.78□□□□□ -0.36
FN1-202ENST00000336916 TTC7AQ9ULT0 858 aaPredicted RBP12.78□□□□□ -0.36
FN1-202ENST00000336916 NR2C2P49116 596 aa12.77□□□□□ -0.36
FN1-202ENST00000336916 PABPC5Q96DU9 382 aaKnown RBP12.77□□□□□ -0.36
FN1-202ENST00000336916 NLNQ9BYT8 704 aa12.77□□□□□ -0.36
FN1-202ENST00000336916 AKAP7Q9P0M2 348 aaPredicted RBP12.77□□□□□ -0.36
FN1-202ENST00000336916 PSMD14O00487 310 aa12.77□□□□□ -0.36
FN1-202ENST00000336916 TIMM44O43615 452 aa12.77□□□□□ -0.36
FN1-202ENST00000336916 CRTAMO95727 393 aa12.77□□□□□ -0.36
FN1-202ENST00000336916 MAPTP10636 758 aaKnown RBP12.77□□□□□ -0.36
FN1-202ENST00000336916 CAPZA2P47755 286 aa12.77□□□□□ -0.36
FN1-202ENST00000336916 MCEEQ96PE7 176 aa12.77□□□□□ -0.36
FN1-202ENST00000336916 LRRC8EQ6NSJ5 796 aa12.77□□□□□ -0.36
FN1-202ENST00000336916 LVRNQ6Q4G3 990 aa12.77□□□□□ -0.36
FN1-202ENST00000336916 DSG4Q86SJ6 1040 aa12.77□□□□□ -0.36
FN1-202ENST00000336916 SPATA31D1Q6ZQQ2 1576 aa12.77□□□□□ -0.37
FN1-202ENST00000336916 DYNC1LI2O43237 492 aaPredicted RBP12.77□□□□□ -0.37
FN1-202ENST00000336916 TRPC1P48995 793 aa12.77□□□□□ -0.37
FN1-202ENST00000336916 LRIG3Q6UXM1 1119 aa12.77□□□□□ -0.37
FN1-202ENST00000336916 ATP6V1G3Q96LB4 118 aa12.77□□□□□ -0.37
FN1-202ENST00000336916 CD274Q9NZQ7 290 aa12.77□□□□□ -0.37
FN1-202ENST00000336916 CSF1RP07333 972 aa12.77□□□□□ -0.37
FN1-202ENST00000336916 NEK2P51955 445 aa12.77□□□□□ -0.37
FN1-202ENST00000336916 SF3A3Q12874 501 aaKnown RBP eCLIP12.77□□□□□ -0.372e-10■■■■□ 26.7
FN1-202ENST00000336916 DMC1Q14565 340 aa12.77□□□□□ -0.37
FN1-202ENST00000336916 REEP2Q9BRK0 252 aa12.77□□□□□ -0.37
FN1-202ENST00000336916 TLR8Q9NR97 1041 aaKnown RBP12.77□□□□□ -0.37
FN1-202ENST00000336916 NAGPAQ9UK23 515 aa12.77□□□□□ -0.37
FN1-202ENST00000336916 PPP3CCP48454 512 aa12.77□□□□□ -0.37
FN1-202ENST00000336916 PPIL2Q13356 520 aa12.77□□□□□ -0.37
FN1-202ENST00000336916 BEND6Q5SZJ8 279 aaPredicted RBP12.77□□□□□ -0.37
FN1-202ENST00000336916 CACHD1Q5VU97 1274 aa12.77□□□□□ -0.37
FN1-202ENST00000336916 NLRP9Q7RTR0 991 aa12.77□□□□□ -0.37
FN1-202ENST00000336916 SNX31Q8N9S9 440 aa12.77□□□□□ -0.37
FN1-202ENST00000336916 RSPH1Q8WYR4 309 aa12.77□□□□□ -0.37
FN1-202ENST00000336916 DPP3Q9NY33 737 aa12.77□□□□□ -0.37
FN1-202ENST00000336916 TRMT6Q9UJA5 497 aaKnown RBP12.77□□□□□ -0.37
FN1-202ENST00000336916 STARD13Q9Y3M8 1113 aa12.77□□□□□ -0.37
FN1-202ENST00000336916 NMT2O60551 498 aa12.77□□□□□ -0.37
FN1-202ENST00000336916 ZMYND10O75800 440 aa12.77□□□□□ -0.37
FN1-202ENST00000336916 CAMTA2O94983 1202 aa12.77□□□□□ -0.37
FN1-202ENST00000336916 HLA-DPA1P20036 260 aa12.77□□□□□ -0.37
FN1-202ENST00000336916 S100A5P33763 92 aa12.77□□□□□ -0.37
FN1-202ENST00000336916 POLR2LP62875 67 aaKnown RBP12.77□□□□□ -0.37
FN1-202ENST00000336916 CDC42EP5Q6NZY7 148 aa12.77□□□□□ -0.37
FN1-202ENST00000336916 TAF2Q6P1X5 1199 aa12.77□□□□□ -0.37
FN1-202ENST00000336916 KRT78Q8N1N4 520 aa12.77□□□□□ -0.37
FN1-202ENST00000336916 PLA2G4CQ9UP65 541 aa12.77□□□□□ -0.37
FN1-202ENST00000336916 TK2O00142 265 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 CXCL11O14625 94 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 TDP2O95551 362 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 JAK1P23458 1154 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 EPHX2P34913 555 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 CAMKK2Q96RR4 588 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 SCUBE2Q9NQ36 999 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 C6orf203Q9P0P8 240 aaPredicted RBP12.76□□□□□ -0.37
FN1-202ENST00000336916 MTO1Q9Y2Z2 717 aaKnown RBP12.76□□□□□ -0.37
FN1-202ENST00000336916 A0A087WZ62 844 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 ITGA11Q9UKX5 1188 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 SNX24Q9Y343 169 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 FAM47DPA6NHR8 397 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms