RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 SOD2P04179 222 aa22.86■■□□□ 1.25
TPM1-204ENST00000334895 PTPN1P18031 435 aaKnown RBP22.86■■□□□ 1.25
TPM1-204ENST00000334895 BMPR1AP36894 532 aa22.86■■□□□ 1.25
TPM1-204ENST00000334895 GFPT1Q06210 699 aaPredicted RBP22.86■■□□□ 1.25
TPM1-204ENST00000334895 HS1BP3Q53T59 392 aa22.86■■□□□ 1.25
TPM1-204ENST00000334895 ZNF677Q86XU0 584 aa22.86■■□□□ 1.25
TPM1-204ENST00000334895 CCDC170Q8IYT3 715 aa22.86■■□□□ 1.25
TPM1-204ENST00000334895 KLHL23Q8NBE8 558 aa22.86■■□□□ 1.25
TPM1-204ENST00000334895 TNIP3Q96KP6 325 aa22.86■■□□□ 1.25
TPM1-204ENST00000334895 HERC2P3Q9BVR0 1158 aa22.86■■□□□ 1.25
TPM1-204ENST00000334895 KIAA1257Q9ULG3 409 aa22.86■■□□□ 1.25
TPM1-204ENST00000334895 PYCARDQ9ULZ3 195 aa22.86■■□□□ 1.25
TPM1-204ENST00000334895 NENFQ9UMX5 172 aa22.86■■□□□ 1.25
TPM1-204ENST00000334895 MYBPHLA2RUH7 354 aa22.86■■□□□ 1.25
TPM1-204ENST00000334895 TBC1D4O60343 1298 aa22.86■■□□□ 1.25
TPM1-204ENST00000334895 PCSK1P29120 753 aa22.86■■□□□ 1.25
TPM1-204ENST00000334895 CTNNB1P35222 781 aa22.86■■□□□ 1.25
TPM1-204ENST00000334895 SMAD3P84022 425 aaKnown RBP22.86■■□□□ 1.25
TPM1-204ENST00000334895 PLCB3Q01970 1234 aa22.86■■□□□ 1.25
TPM1-204ENST00000334895 USP41Q3LFD5 358 aa22.86■■□□□ 1.25
TPM1-204ENST00000334895 SGO2Q562F6 1265 aa22.86■■□□□ 1.25
TPM1-204ENST00000334895 PPP1R26Q5T8A7 1209 aaPredicted RBP22.86■■□□□ 1.25
TPM1-204ENST00000334895 PRSS55Q6UWB4 352 aaPredicted RBP22.86■■□□□ 1.25
TPM1-204ENST00000334895 TOGARAM2Q6ZUX3 1019 aa22.86■■□□□ 1.25
TPM1-204ENST00000334895 THEM5Q8N1Q8 247 aa22.86■■□□□ 1.25
TPM1-204ENST00000334895 EPN1Q9Y6I3 576 aaPredicted RBP22.86■■□□□ 1.25
TPM1-204ENST00000334895 CDH23Q9H251 3354 aa22.85■■□□□ 1.25
TPM1-204ENST00000334895 AKR1B10O60218 316 aa22.85■■□□□ 1.25
TPM1-204ENST00000334895 NDUFA10O95299 355 aa22.85■■□□□ 1.25
TPM1-204ENST00000334895 CCDC130P13994 396 aa22.85■■□□□ 1.25
TPM1-204ENST00000334895 TNFAIP3P21580 790 aa22.85■■□□□ 1.25
TPM1-204ENST00000334895 ANXA13P27216 316 aa22.85■■□□□ 1.25
TPM1-204ENST00000334895 BMS1Q14692 1282 aaKnown RBP22.85■■□□□ 1.25
TPM1-204ENST00000334895 SLC18A3Q16572 532 aa22.85■■□□□ 1.25
TPM1-204ENST00000334895 INTS6LQ5JSJ4 861 aaKnown RBP22.85■■□□□ 1.25
TPM1-204ENST00000334895 ARHGAP17Q68EM7 881 aa22.85■■□□□ 1.25
TPM1-204ENST00000334895 RSPO2Q6UXX9 243 aaPredicted RBP22.85■■□□□ 1.25
TPM1-204ENST00000334895 LRRTM3Q86VH5 581 aa22.85■■□□□ 1.25
TPM1-204ENST00000334895 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.85■■□□□ 1.25
TPM1-204ENST00000334895 DEF6Q9H4E7 631 aa22.85■■□□□ 1.25
TPM1-204ENST00000334895 PCDHGC3Q9UN70 934 aa22.85■■□□□ 1.25
TPM1-204ENST00000334895 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.85■■□□□ 1.25
TPM1-204ENST00000334895 REXO2Q9Y3B8 237 aaKnown RBP22.85■■□□□ 1.25
TPM1-204ENST00000334895 NRDCO43847 1150 aa22.84■■□□□ 1.25
TPM1-204ENST00000334895 LCA5LO95447 670 aa22.84■■□□□ 1.25
TPM1-204ENST00000334895 CDR1P51861 262 aa22.84■■□□□ 1.25
TPM1-204ENST00000334895 CNGA2Q16280 664 aa22.84■■□□□ 1.25
TPM1-204ENST00000334895 CTXN3Q4LDR2 81 aa22.84■■□□□ 1.25
TPM1-204ENST00000334895 MDH1BQ5I0G3 518 aa22.84■■□□□ 1.25
TPM1-204ENST00000334895 ZNF280DQ6N043 979 aa22.84■■□□□ 1.25
TPM1-204ENST00000334895 FAM171BQ6P995 826 aa22.84■■□□□ 1.25
TPM1-204ENST00000334895 PIK3R5Q8WYR1 880 aa22.84■■□□□ 1.25
TPM1-204ENST00000334895 DESI2Q9BSY9 194 aa22.84■■□□□ 1.25
TPM1-204ENST00000334895 TMLHEQ9NVH6 421 aa22.84■■□□□ 1.25
TPM1-204ENST00000334895 GTF3C4Q9UKN8 822 aa22.84■■□□□ 1.25
TPM1-204ENST00000334895 FAM170AA1A519 330 aa22.83■■□□□ 1.25
TPM1-204ENST00000334895 EIF3CLB5ME19 914 aaKnown RBP22.83■■□□□ 1.25
TPM1-204ENST00000334895 OR4Q2P0C623 313 aa22.83■■□□□ 1.25
TPM1-204ENST00000334895 DNAJB2P25686 324 aa22.83■■□□□ 1.25
TPM1-204ENST00000334895 CYLC1P35663 651 aaPredicted RBP22.83■■□□□ 1.25
TPM1-204ENST00000334895 CYP27A1Q02318 531 aa22.83■■□□□ 1.25
TPM1-204ENST00000334895 DSG1Q02413 1049 aa22.83■■□□□ 1.25
TPM1-204ENST00000334895 TAP1Q03518 808 aa22.83■■□□□ 1.25
TPM1-204ENST00000334895 DENND1BQ6P3S1 775 aa22.83■■□□□ 1.25
TPM1-204ENST00000334895 LCLAT1Q6UWP7 414 aa22.83■■□□□ 1.25
TPM1-204ENST00000334895 PAQR9Q6ZVX9 377 aa22.83■■□□□ 1.25
TPM1-204ENST00000334895 ANKS3Q6ZW76 656 aa22.83■■□□□ 1.25
TPM1-204ENST00000334895 PASD1Q8IV76 773 aa22.83■■□□□ 1.25
TPM1-204ENST00000334895 FUKQ8N0W3 1084 aa22.83■■□□□ 1.25
TPM1-204ENST00000334895 VPS52Q8N1B4 723 aa22.83■■□□□ 1.25
TPM1-204ENST00000334895 ACRBPQ8NEB7 543 aa22.83■■□□□ 1.25
TPM1-204ENST00000334895 MYCBPAPQ8TBZ2 947 aa22.83■■□□□ 1.25
TPM1-204ENST00000334895 RIN2Q8WYP3 895 aaPredicted RBP22.83■■□□□ 1.25
TPM1-204ENST00000334895 TRIM44Q96DX7 344 aaPredicted RBP22.83■■□□□ 1.25
TPM1-204ENST00000334895 CYFIP2Q96F07 1278 aa22.83■■□□□ 1.25
TPM1-204ENST00000334895 EIF3CQ99613 913 aaKnown RBP22.83■■□□□ 1.25
TPM1-204ENST00000334895 PLVAPQ9BX97 442 aa22.83■■□□□ 1.25
TPM1-204ENST00000334895 ZCWPW1Q9H0M4 648 aa22.83■■□□□ 1.25
TPM1-204ENST00000334895 SEPT11Q9NVA2 429 aaKnown RBP22.83■■□□□ 1.25
TPM1-204ENST00000334895 TAS2R14Q9NYV8 317 aa22.83■■□□□ 1.25
TPM1-204ENST00000334895 CHD7Q9P2D1 2997 aa22.83■■□□□ 1.25
TPM1-204ENST00000334895 TSPAN16Q9UKR8 245 aa22.83■■□□□ 1.25
TPM1-204ENST00000334895 RWDD3Q9Y3V2 267 aa22.83■■□□□ 1.25
TPM1-204ENST00000334895 C5orf67F2Z3F1 127 aa22.82■■□□□ 1.24
TPM1-204ENST00000334895 MICAL2O94851 1124 aa22.82■■□□□ 1.24
TPM1-204ENST00000334895 CYP1A1P04798 512 aaPredicted RBP22.82■■□□□ 1.24
TPM1-204ENST00000334895 GOLGA7BQ2TAP0 167 aa22.82■■□□□ 1.24
TPM1-204ENST00000334895 VPS36Q86VN1 386 aa22.82■■□□□ 1.24
TPM1-204ENST00000334895 DNAAF5Q86Y56 855 aa22.82■■□□□ 1.24
TPM1-204ENST00000334895 SLC2A14Q8TDB8 520 aa22.82■■□□□ 1.24
TPM1-204ENST00000334895 PCED1BQ96HM7 432 aa22.82■■□□□ 1.24
TPM1-204ENST00000334895 B3GNT5Q9BYG0 378 aa22.82■■□□□ 1.24
TPM1-204ENST00000334895 ZBP1Q9H171 429 aa22.82■■□□□ 1.24
TPM1-204ENST00000334895 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.82■■□□□ 1.24
TPM1-204ENST00000334895 MTRRQ9UBK8 725 aa22.82■■□□□ 1.24
TPM1-204ENST00000334895 NAGPAQ9UK23 515 aa22.82■■□□□ 1.24
TPM1-204ENST00000334895 MTUS1Q9ULD2 1270 aa22.82■■□□□ 1.24
TPM1-204ENST00000334895 MED7O43513 233 aa22.82■■□□□ 1.24
TPM1-204ENST00000334895 UNGP13051 313 aaPredicted RBP22.82■■□□□ 1.24
TPM1-204ENST00000334895 GLUD2P49448 558 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms