RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 TFR2Q9UP52 801 aa17.59■□□□□ 0.41
SHOX-201ENST00000334060 CDY1Q9Y6F8 540 aa17.59■□□□□ 0.41
SHOX-201ENST00000334060 LPXNO60711 386 aa17.58■□□□□ 0.4
SHOX-201ENST00000334060 SPATA31D3P0C874 917 aa17.58■□□□□ 0.4
SHOX-201ENST00000334060 ADORA2BP29275 332 aa17.58■□□□□ 0.4
SHOX-201ENST00000334060 PTPN14Q15678 1187 aa17.58■□□□□ 0.4
SHOX-201ENST00000334060 CTXN3Q4LDR2 81 aa17.58■□□□□ 0.4
SHOX-201ENST00000334060 SPATA31D4Q6ZUB0 917 aa17.58■□□□□ 0.4
SHOX-201ENST00000334060 ADGRD2Q7Z7M1 963 aa17.58■□□□□ 0.4
SHOX-201ENST00000334060 HEXIM2Q96MH2 286 aaKnown RBP17.58■□□□□ 0.4
SHOX-201ENST00000334060 SLC28A3Q9HAS3 691 aa17.58■□□□□ 0.4
SHOX-201ENST00000334060 TAS2R14Q9NYV8 317 aa17.58■□□□□ 0.4
SHOX-201ENST00000334060 CYTH4Q9UIA0 394 aa17.58■□□□□ 0.4
SHOX-201ENST00000334060 C5orf67F2Z3F1 127 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 OAZ2O95190 189 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 P4HA1P13674 534 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 TYMPP19971 482 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 GPR15P49685 360 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 PLCB3Q01970 1234 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 ASIC2Q16515 512 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 USP41Q3LFD5 358 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 SDHAF4Q5VUM1 108 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 ATAD1Q8NBU5 361 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 B3GALNT2Q8NCR0 500 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 OR8K1Q8NGG5 319 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 UBA3Q8TBC4 463 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 PCED1BQ96HM7 432 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 TCF25Q9BQ70 676 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 HERC2P3Q9BVR0 1158 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 NT5C1AQ9BXI3 368 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 ZNF518BQ9C0D4 1074 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 AIPL1Q9NZN9 384 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 MSRAQ9UJ68 235 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 WDR27A2RRH5 827 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 LILRB3O75022 631 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 PTPN1P18031 435 aaKnown RBP17.57■□□□□ 0.4
SHOX-201ENST00000334060 GNA15P30679 374 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 GTF2F1P35269 517 aaKnown RBP eCLIP17.57■□□□□ 0.4
SHOX-201ENST00000334060 GLUD2P49448 558 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 FMO1Q01740 532 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 DSG1Q02413 1049 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 PSMD5Q16401 504 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 SLC39A12Q504Y0 691 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 LLGL2Q6P1M3 1020 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 DENND1BQ6P3S1 775 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 RAD9BQ6WBX8 426 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 RNF19BQ6ZMZ0 732 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 TTC30AQ86WT1 665 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 FUKQ8N0W3 1084 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 FBXO22Q8NEZ5 403 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 SLC2A14Q8TDB8 520 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 MYLPFQ96A32 169 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 B3GNT5Q9BYG0 378 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 SPTLC3Q9NUV7 552 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 ZKSCAN5Q9Y2L8 839 aa17.57■□□□□ 0.4
SHOX-201ENST00000334060 PIK3R2O00459 728 aa17.56■□□□□ 0.4
SHOX-201ENST00000334060 SYN3O14994 580 aa17.56■□□□□ 0.4
SHOX-201ENST00000334060 PER2O15055 1255 aa17.56■□□□□ 0.4
SHOX-201ENST00000334060 TEX28O15482 410 aa17.56■□□□□ 0.4
SHOX-201ENST00000334060 THAP12O43422 761 aa17.56■□□□□ 0.4
SHOX-201ENST00000334060 TRAPPC3O43617 180 aa17.56■□□□□ 0.4
SHOX-201ENST00000334060 CNPP09543 421 aaKnown RBP17.56■□□□□ 0.4
SHOX-201ENST00000334060 OR1D2P34982 312 aa17.56■□□□□ 0.4
SHOX-201ENST00000334060 GPM6BQ13491 265 aa17.56■□□□□ 0.4
SHOX-201ENST00000334060 INTS6LQ5JSJ4 861 aaKnown RBP17.56■□□□□ 0.4
SHOX-201ENST00000334060 TMC7Q7Z402 723 aa17.56■□□□□ 0.4
SHOX-201ENST00000334060 ZNF606Q8WXB4 792 aa17.56■□□□□ 0.4
SHOX-201ENST00000334060 AAASQ9NRG9 546 aa17.56■□□□□ 0.4
SHOX-201ENST00000334060 ZNF263O14978 683 aa17.55■□□□□ 0.4
SHOX-201ENST00000334060 GABBR2O75899 941 aa17.55■□□□□ 0.4
SHOX-201ENST00000334060 RFX1P22670 979 aa17.55■□□□□ 0.4
SHOX-201ENST00000334060 PPM1AP35813 382 aa17.55■□□□□ 0.4
SHOX-201ENST00000334060 EIF4A3P38919 411 aaKnown RBP17.55■□□□□ 0.4
SHOX-201ENST00000334060 CCZ1BP86790 482 aa17.55■□□□□ 0.4
SHOX-201ENST00000334060 CCZ1P86791 482 aaPredicted RBP17.55■□□□□ 0.4
SHOX-201ENST00000334060 ROR1Q01973 937 aa17.55■□□□□ 0.4
SHOX-201ENST00000334060 TRIM14Q14142 442 aa17.55■□□□□ 0.4
SHOX-201ENST00000334060 MEA1Q16626 185 aa17.55■□□□□ 0.4
SHOX-201ENST00000334060 TDRD12Q587J7 1177 aaKnown RBP17.55■□□□□ 0.4
SHOX-201ENST00000334060 KIAA1841Q6NSI8 718 aa17.55■□□□□ 0.4
SHOX-201ENST00000334060 ENOSF1Q7L5Y1 443 aa17.55■□□□□ 0.4
SHOX-201ENST00000334060 TMEM86AQ8N2M4 240 aa17.55■□□□□ 0.4
SHOX-201ENST00000334060 WDTC1Q8N5D0 677 aa17.55■□□□□ 0.4
SHOX-201ENST00000334060 GPR152Q8TDT2 470 aa17.55■□□□□ 0.4
SHOX-201ENST00000334060 PIK3R5Q8WYR1 880 aa17.55■□□□□ 0.4
SHOX-201ENST00000334060 JAKMIP2Q96AA8 810 aa17.55■□□□□ 0.4
SHOX-201ENST00000334060 KCNK16Q96T55 309 aa17.55■□□□□ 0.4
SHOX-201ENST00000334060 MTRRQ9UBK8 725 aa17.55■□□□□ 0.4
SHOX-201ENST00000334060 CHORDC1Q9UHD1 332 aaPredicted RBP17.55■□□□□ 0.4
SHOX-201ENST00000334060 SLC27A5Q9Y2P5 690 aa17.55■□□□□ 0.4
SHOX-201ENST00000334060 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.55■□□□□ 0.4
SHOX-201ENST00000334060 H3BNC9 293 aa17.55■□□□□ 0.4
SHOX-201ENST00000334060 O00370 1275 aa17.55■□□□□ 0.4
SHOX-201ENST00000334060 DDX3XO00571 662 aaKnown RBP eCLIP17.55■□□□□ 0.4
SHOX-201ENST00000334060 HNRNPH3P31942 346 aaKnown RBP17.55■□□□□ 0.4
SHOX-201ENST00000334060 CYP27A1Q02318 531 aa17.55■□□□□ 0.4
SHOX-201ENST00000334060 GFPT1Q06210 699 aaPredicted RBP17.55■□□□□ 0.4
SHOX-201ENST00000334060 KLHL30Q0D2K2 578 aa17.55■□□□□ 0.4
SHOX-201ENST00000334060 RAB30Q15771 203 aa17.55■□□□□ 0.4
SHOX-201ENST00000334060 PHLDB2Q86SQ0 1253 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms