RNA–Protein interactions for RNA: ENST00000332246.10

CSGALNACT1-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 3,872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-201ENST00000332246 ART3Q13508 389 aa10.28□□□□□ -0.76
CSGALNACT1-201ENST00000332246 TFDP2Q14188 446 aa10.28□□□□□ -0.76
CSGALNACT1-201ENST00000332246 DACT2Q5SW24 774 aa10.28□□□□□ -0.76
CSGALNACT1-201ENST00000332246 SH3BP5LQ7L8J4 393 aa10.28□□□□□ -0.76
CSGALNACT1-201ENST00000332246 TEX2Q8IWB9 1127 aa10.28□□□□□ -0.76
CSGALNACT1-201ENST00000332246 TTC8Q8TAM2 541 aa10.28□□□□□ -0.76
CSGALNACT1-201ENST00000332246 HDAC11Q96DB2 347 aa10.28□□□□□ -0.76
CSGALNACT1-201ENST00000332246 RBAK-RBAKDNI3L0D1 243 aa10.28□□□□□ -0.76
CSGALNACT1-201ENST00000332246 KCNA3P22001 575 aa10.28□□□□□ -0.76
CSGALNACT1-201ENST00000332246 IL1RL1Q01638 556 aa10.28□□□□□ -0.76
CSGALNACT1-201ENST00000332246 MMRN1Q13201 1228 aa10.28□□□□□ -0.76
CSGALNACT1-201ENST00000332246 RBBP5Q15291 538 aaKnown RBP10.28□□□□□ -0.76
CSGALNACT1-201ENST00000332246 DCAF12L1Q5VU92 463 aa10.28□□□□□ -0.76
CSGALNACT1-201ENST00000332246 C4orf50Q6ZRC1 276 aa10.28□□□□□ -0.76
CSGALNACT1-201ENST00000332246 MTBPQ96DY7 904 aa10.28□□□□□ -0.76
CSGALNACT1-201ENST00000332246 FAM163AQ96GL9 167 aaPredicted RBP10.28□□□□□ -0.76
CSGALNACT1-201ENST00000332246 GMCL1Q96IK5 515 aa10.28□□□□□ -0.76
CSGALNACT1-201ENST00000332246 TRIM56Q9BRZ2 755 aaKnown RBP10.28□□□□□ -0.76
CSGALNACT1-201ENST00000332246 NUF2Q9BZD4 464 aa10.28□□□□□ -0.76
CSGALNACT1-201ENST00000332246 KIAA1683Q9H0B3 1180 aa10.28□□□□□ -0.76
CSGALNACT1-201ENST00000332246 KDM4CQ9H3R0 1056 aa10.28□□□□□ -0.76
CSGALNACT1-201ENST00000332246 ADA2Q9NZK5 511 aa10.28□□□□□ -0.76
CSGALNACT1-201ENST00000332246 NOD1Q9Y239 953 aa10.28□□□□□ -0.76
CSGALNACT1-201ENST00000332246 USP12O75317 370 aa10.27□□□□□ -0.76
CSGALNACT1-201ENST00000332246 ICAM1P05362 532 aa10.27□□□□□ -0.76
CSGALNACT1-201ENST00000332246 RARBP10826 455 aa10.27□□□□□ -0.76
CSGALNACT1-201ENST00000332246 HOXD13P35453 343 aa10.27□□□□□ -0.76
CSGALNACT1-201ENST00000332246 TNFSF9P41273 254 aa10.27□□□□□ -0.76
CSGALNACT1-201ENST00000332246 GLRBP48167 497 aa10.27□□□□□ -0.76
CSGALNACT1-201ENST00000332246 COBLL1Q53SF7 1204 aa10.27□□□□□ -0.76
CSGALNACT1-201ENST00000332246 ATG16L1Q676U5 607 aa10.27□□□□□ -0.76
CSGALNACT1-201ENST00000332246 POLNQ7Z5Q5 900 aa10.27□□□□□ -0.76
CSGALNACT1-201ENST00000332246 ACOT1Q86TX2 421 aa10.27□□□□□ -0.76
CSGALNACT1-201ENST00000332246 CCDC60Q8IWA6 550 aaPredicted RBP10.27□□□□□ -0.76
CSGALNACT1-201ENST00000332246 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.27□□□□□ -0.76
CSGALNACT1-201ENST00000332246 MORC4Q8TE76 937 aa10.27□□□□□ -0.76
CSGALNACT1-201ENST00000332246 NDE1Q9NXR1 346 aa10.27□□□□□ -0.76
CSGALNACT1-201ENST00000332246 GTSE1Q9NYZ3 720 aa10.27□□□□□ -0.76
CSGALNACT1-201ENST00000332246 VAV3Q9UKW4 847 aa10.27□□□□□ -0.76
CSGALNACT1-201ENST00000332246 UMODL1Q5DID0 1318 aa10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 MED1Q15648 1581 aaPredicted RBP10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 GTPBP10A4D1E9 387 aaKnown RBP10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 SPDYE2BA6NHP3 402 aa10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 ZMPSTE24O75844 475 aa10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 CFHP08603 1231 aa10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 SPDYE6P0CI01 402 aa10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 SRGAP2BP0DMP2 458 aa10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 CXCL8P10145 99 aa10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 TXNP10599 105 aaKnown RBP10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 VCAM1P19320 739 aa10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 RPL10AP62906 217 aaKnown RBP10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 KLC1Q07866 573 aa10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 TRIP10Q15642 601 aa10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 SPOCD1Q6ZMY3 1216 aa10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 DEFB132Q7Z7B7 95 aa10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 CPB2Q96IY4 423 aa10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 MECRQ9BV79 373 aa10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 KIAA1586Q9HCI6 787 aa10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 SIX2Q9NPC8 291 aa10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 KCNG1Q9UIX4 513 aa10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 GAKO14976 1311 aa10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 TOPAZ1Q8N9V7 1692 aa10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 EXTL3O43909 919 aa10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 SHOX2O60902 331 aaPredicted RBP10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 SEC24DO94855 1032 aaPredicted RBP10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 RFC1P35251 1148 aaPredicted RBP10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 GEMIN4P57678 1058 aaKnown RBP10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 STX3Q13277 289 aa10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 C15orf59Q2T9L4 293 aaPredicted RBP10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 GJC2Q5T442 439 aaPredicted RBP10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 ZNF662Q6ZS27 426 aa10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 ENOSF1Q7L5Y1 443 aa10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 FLAD1Q8NFF5 587 aa10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 USP6NLQ92738 828 aa10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 PGM2Q96G03 612 aa10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 NAF1Q96HR8 494 aaKnown RBP10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 ZFATQ9P243 1243 aa10.27□□□□□ -0.77
CSGALNACT1-201ENST00000332246 ANKRD12Q6UB98 2062 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 PFDN1O60925 122 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 PDE5AO76074 875 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 DPEP1P16444 411 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 AQP5P55064 265 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 FAAP100Q0VG06 881 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 DBN1Q16643 649 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 LY6KQ17RY6 165 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 ANKRD20A2Q5SQ80 823 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 ANKRD20A1Q5TYW2 823 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 FAM131BQ86XD5 332 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 SUGP1Q8IWZ8 645 aaKnown RBP10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 SIX6OS1Q8N1H7 587 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 MREGQ8N565 214 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 FITM2Q8N6M3 262 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 TTC13Q8NBP0 860 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 CCT6BQ92526 530 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 TMA16Q96EY4 203 aaKnown RBP10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 TEX13BQ9BXU2 312 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 NR2E3Q9Y5X4 410 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 FRMPD4Q14CM0 1322 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 CCDC22O60826 627 aa10.26□□□□□ -0.77
CSGALNACT1-201ENST00000332246 OSBPP22059 807 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms