RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 ANKRD13BQ86YJ7 626 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 SYCE1Q8N0S2 351 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 FBXO27Q8NI29 283 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 FAM172AQ8WUF8 416 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 LSM14BQ9BX40 385 aaKnown RBP12.43□□□□□ -0.42
SHMT2-201ENST00000328923 CDC42EP4Q9H3Q1 356 aaKnown RBP12.43□□□□□ -0.42
SHMT2-201ENST00000328923 APPL1Q9UKG1 709 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 PCDHGA8Q9Y5G5 932 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 ITM2AO43736 263 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 RBP3P10745 1247 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 TRAPPC3LQ5T215 181 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 BORAQ6PGQ7 559 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 DCLRE1AQ6PJP8 1040 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 CCDC81Q6ZN84 652 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 EPM2AIP1Q7L775 607 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-201ENST00000328923 NET1Q7Z628 596 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-201ENST00000328923 CCDC24Q8N4L8 307 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 RFWD2Q8NHY2 731 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 GABPB2Q8TAK5 448 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-201ENST00000328923 CCDC110Q8TBZ0 833 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 SUN5Q8TC36 379 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 RASGRP4Q8TDF6 673 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 GDPD5Q8WTR4 605 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 PYDC1Q8WXC3 89 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 C18orf8Q96DM3 657 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 BIRC8Q96P09 236 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 GCNAQ96QF7 691 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 ZNF287Q9HBT7 754 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 CYLDQ9NQC7 956 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 FBXO6Q9NRD1 293 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-201ENST00000328923 THEGQ9P2T0 379 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 DNAJB4Q9UDY4 337 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 POU2F3Q9UKI9 436 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 ADAMTS6Q9UKP5 1117 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 DIS3Q9Y2L1 958 aaKnown RBP12.42□□□□□ -0.42
SHMT2-201ENST00000328923 ARIH1Q9Y4X5 557 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-201ENST00000328923 UTRNP46939 3433 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 WDR91A4D1P6 747 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 FAM187AA6NFU0 413 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 ANKRD63C9JTQ0 380 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 MCF2LO15068 1137 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 RARBP10826 455 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 POLR2EP19388 210 aaKnown RBP12.42□□□□□ -0.42
SHMT2-201ENST00000328923 IL4RP24394 825 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 ACTR3P61158 418 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 RPS8P62241 208 aaKnown RBP12.42□□□□□ -0.42
SHMT2-201ENST00000328923 TUBA4AP68366 448 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 MAPK7Q13164 816 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 GK3PQ14409 553 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 CLUL1Q15846 466 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 CYP2A13Q16696 494 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 ITPRIPL1Q6GPH6 555 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 NANOGP8Q6NSW7 305 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 IYDQ6PHW0 289 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 KRT25Q7Z3Z0 450 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 TPCN2Q8NHX9 752 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 CNGB3Q9NQW8 809 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 NCKIPSDQ9NZQ3 722 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 TMOD2Q9NZR1 351 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 HEY2Q9UBP5 337 aa12.42□□□□□ -0.42
SHMT2-201ENST00000328923 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.42□□□□□ -0.42
SHMT2-201ENST00000328923 KIAA1551Q9HCM1 1747 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 CDK2AP1O14519 115 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 ARHGAP33O14559 1287 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 CD48P09326 243 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 KRT13P13646 458 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 DRG2P55039 364 aaKnown RBP12.41□□□□□ -0.42
SHMT2-201ENST00000328923 RAPGEF1Q13905 1077 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 TIGD2Q4W5G0 525 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 CAVIN4Q5BKX8 364 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 MAP3K21Q5TCX8 1036 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 C1orf146Q5VVC0 180 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 EGFLAMQ63HQ2 1017 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 SHKBP1Q8TBC3 707 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 GPKOWQ92917 476 aaPredicted RBP eCLIP12.41□□□□□ -0.42
SHMT2-201ENST00000328923 EFHD2Q96C19 240 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-201ENST00000328923 PLEKHA8Q96JA3 519 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 GANQ9H2C0 597 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 BARHL2Q9NY43 387 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 HACD3Q9P035 362 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 NENFQ9UMX5 172 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 GPSM3Q9Y4H4 160 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 ADGRA3Q8IWK6 1321 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 FAM47DPA6NHR8 397 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 MYMKA6NI61 221 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 RSPH10B2B2RC85 870 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 KMOO15229 486 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 CIB2O75838 187 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 BBOX1O75936 387 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 RSPH10BP0C881 870 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 FGFR1P11362 822 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 NCKAP1LP55160 1127 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 OVGP1Q12889 678 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 PSMD6Q15008 389 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 TRMT5Q32P41 509 aaKnown RBP12.41□□□□□ -0.42
SHMT2-201ENST00000328923 ARSHQ5FYA8 562 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 DCAF12L1Q5VU92 463 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 MIER3Q7Z3K6 550 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 TRIM59Q8IWR1 403 aa12.41□□□□□ -0.42
SHMT2-201ENST00000328923 POU5F2Q8N7G0 328 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms