RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 CBSP35520 551 aa4.06□□□□□ -1.76
CBX3P1-201ENST00000325243 PHKA1P46020 1223 aa4.06□□□□□ -1.76
CBX3P1-201ENST00000325243 GCLCP48506 637 aaPredicted RBP4.06□□□□□ -1.76
CBX3P1-201ENST00000325243 ALDH9A1P49189 494 aa4.06□□□□□ -1.76
CBX3P1-201ENST00000325243 CLCN2P51788 898 aa4.06□□□□□ -1.76
CBX3P1-201ENST00000325243 SP2Q02086 613 aa4.06□□□□□ -1.76
CBX3P1-201ENST00000325243 LAMB3Q13751 1172 aa4.06□□□□□ -1.76
CBX3P1-201ENST00000325243 RAPGEF1Q13905 1077 aa4.06□□□□□ -1.76
CBX3P1-201ENST00000325243 ACAP2Q15057 778 aa4.06□□□□□ -1.76
CBX3P1-201ENST00000325243 Q4G0T1 1027 aa4.06□□□□□ -1.76
CBX3P1-201ENST00000325243 PCID2Q5JVF3 399 aa4.06□□□□□ -1.76
CBX3P1-201ENST00000325243 TEDDM1Q5T9Z0 273 aa4.06□□□□□ -1.76
CBX3P1-201ENST00000325243 NAPRTQ6XQN6 538 aa4.06□□□□□ -1.76
CBX3P1-201ENST00000325243 DTX2Q86UW9 622 aa4.06□□□□□ -1.76
CBX3P1-201ENST00000325243 KRT73Q86Y46 540 aa4.06□□□□□ -1.76
CBX3P1-201ENST00000325243 CNGA4Q8IV77 575 aa4.06□□□□□ -1.76
CBX3P1-201ENST00000325243 CNTD1Q8N815 330 aa4.06□□□□□ -1.76
CBX3P1-201ENST00000325243 C8orf58Q8NAV2 365 aa4.06□□□□□ -1.76
CBX3P1-201ENST00000325243 COA7Q96BR5 231 aa4.06□□□□□ -1.76
CBX3P1-201ENST00000325243 PUS7LQ9H0K6 701 aaKnown RBP4.06□□□□□ -1.76
CBX3P1-201ENST00000325243 SLAMF7Q9NQ25 335 aa4.06□□□□□ -1.76
CBX3P1-201ENST00000325243 MKS1Q9NXB0 559 aa4.06□□□□□ -1.76
CBX3P1-201ENST00000325243 SERPINB13Q9UIV8 391 aa4.06□□□□□ -1.76
CBX3P1-201ENST00000325243 PRKAB1Q9Y478 270 aa4.06□□□□□ -1.76
CBX3P1-201ENST00000325243 LRP12Q9Y561 859 aa4.06□□□□□ -1.76
CBX3P1-201ENST00000325243 PCDHGA9Q9Y5G4 932 aaKnown RBP4.06□□□□□ -1.76
CBX3P1-201ENST00000325243 PCDHGA8Q9Y5G5 932 aa4.06□□□□□ -1.76
CBX3P1-201ENST00000325243 PCDHGA7Q9Y5G6 932 aa4.06□□□□□ -1.76
CBX3P1-201ENST00000325243 PCDHGA6Q9Y5G7 932 aa4.06□□□□□ -1.76
CBX3P1-201ENST00000325243 PCDHGA3Q9Y5H0 932 aa4.06□□□□□ -1.76
CBX3P1-201ENST00000325243 RAD54BQ9Y620 910 aa4.06□□□□□ -1.76
CBX3P1-201ENST00000325243 LRRC14BA6NHZ5 514 aa4.05□□□□□ -1.76
CBX3P1-201ENST00000325243 CLSTN1O94985 981 aa4.05□□□□□ -1.76
CBX3P1-201ENST00000325243 MT-CO1P00395 513 aa4.05□□□□□ -1.76
CBX3P1-201ENST00000325243 GNAI3P08754 354 aa4.05□□□□□ -1.76
CBX3P1-201ENST00000325243 RARBP10826 455 aa4.05□□□□□ -1.76
CBX3P1-201ENST00000325243 LINC00205P59089 165 aa4.05□□□□□ -1.76
CBX3P1-201ENST00000325243 GNAI1P63096 354 aa4.05□□□□□ -1.76
CBX3P1-201ENST00000325243 KIF23Q02241 960 aaPredicted RBP4.05□□□□□ -1.76
CBX3P1-201ENST00000325243 DSC2Q02487 901 aa4.05□□□□□ -1.76
CBX3P1-201ENST00000325243 TREML2Q5T2D2 321 aa4.05□□□□□ -1.76
CBX3P1-201ENST00000325243 PPP4R3AQ6IN85 833 aa4.05□□□□□ -1.76
CBX3P1-201ENST00000325243 ATL2Q8NHH9 583 aa4.05□□□□□ -1.76
CBX3P1-201ENST00000325243 CYP2W1Q8TAV3 490 aa4.05□□□□□ -1.76
CBX3P1-201ENST00000325243 ZC3H10Q96K80 434 aaKnown RBP4.05□□□□□ -1.76
CBX3P1-201ENST00000325243 C1orf43Q9BWL3 253 aa4.05□□□□□ -1.76
CBX3P1-201ENST00000325243 TINAGL1Q9GZM7 467 aaPredicted RBP4.05□□□□□ -1.76
CBX3P1-201ENST00000325243 DUSP22Q9NRW4 184 aa4.05□□□□□ -1.76
CBX3P1-201ENST00000325243 CFAP97Q9P2B7 532 aa4.05□□□□□ -1.76
CBX3P1-201ENST00000325243 AFG3L2Q9Y4W6 797 aa4.05□□□□□ -1.76
CBX3P1-201ENST00000325243 H3BNC9 293 aa4.04□□□□□ -1.76
CBX3P1-201ENST00000325243 BCAR3O75815 825 aa4.04□□□□□ -1.76
CBX3P1-201ENST00000325243 SNHG28P0DPA3 235 aa4.04□□□□□ -1.76
CBX3P1-201ENST00000325243 ENGP17813 658 aa4.04□□□□□ -1.76
CBX3P1-201ENST00000325243 ZNF134P52741 427 aa4.04□□□□□ -1.76
CBX3P1-201ENST00000325243 HOXA4Q00056 320 aaPredicted RBP4.04□□□□□ -1.76
CBX3P1-201ENST00000325243 KIF22Q14807 665 aa4.04□□□□□ -1.76
CBX3P1-201ENST00000325243 LRRC41Q15345 812 aa4.04□□□□□ -1.76
CBX3P1-201ENST00000325243 TRIP6Q15654 476 aaKnown RBP4.04□□□□□ -1.76
CBX3P1-201ENST00000325243 TMEM108Q6UXF1 575 aa4.04□□□□□ -1.76
CBX3P1-201ENST00000325243 WDR53Q7Z5U6 358 aaPredicted RBP4.04□□□□□ -1.76
CBX3P1-201ENST00000325243 NECAB2Q7Z6G3 386 aa4.04□□□□□ -1.76
CBX3P1-201ENST00000325243 FAM90A1Q86YD7 464 aa4.04□□□□□ -1.76
CBX3P1-201ENST00000325243 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.04□□□□□ -1.76
CBX3P1-201ENST00000325243 RITA1Q96K30 269 aa4.04□□□□□ -1.76
CBX3P1-201ENST00000325243 ASB2Q96Q27 587 aa4.04□□□□□ -1.76
CBX3P1-201ENST00000325243 TMEM79Q9BSE2 394 aa4.04□□□□□ -1.76
CBX3P1-201ENST00000325243 EBF3Q9H4W6 596 aa4.04□□□□□ -1.76
CBX3P1-201ENST00000325243 MAN1C1Q9NR34 630 aa4.04□□□□□ -1.76
CBX3P1-201ENST00000325243 SLC5A4Q9NY91 659 aa4.04□□□□□ -1.76
CBX3P1-201ENST00000325243 E5RJQ4 531 aa4.03□□□□□ -1.76
CBX3P1-201ENST00000325243 SLC16A3O15427 465 aaKnown RBP4.03□□□□□ -1.76
CBX3P1-201ENST00000325243 FESP07332 822 aa4.03□□□□□ -1.76
CBX3P1-201ENST00000325243 PRDX5P30044 214 aa4.03□□□□□ -1.76
CBX3P1-201ENST00000325243 PIK3CGP48736 1102 aa4.03□□□□□ -1.76
CBX3P1-201ENST00000325243 FXR1P51114 621 aaKnown RBP eCLIP4.03□□□□□ -1.76
CBX3P1-201ENST00000325243 KRT85P78386 507 aa4.03□□□□□ -1.76
CBX3P1-201ENST00000325243 PXDC1Q5TGL8 231 aa4.03□□□□□ -1.76
CBX3P1-201ENST00000325243 USP37Q86T82 979 aa4.03□□□□□ -1.76
CBX3P1-201ENST00000325243 TTC7BQ86TV6 843 aa4.03□□□□□ -1.76
CBX3P1-201ENST00000325243 ZDHHC17Q8IUH5 632 aa4.03□□□□□ -1.76
CBX3P1-201ENST00000325243 NRACQ8N912 160 aa4.03□□□□□ -1.76
CBX3P1-201ENST00000325243 FAXDC2Q96IV6 333 aa4.03□□□□□ -1.76
CBX3P1-201ENST00000325243 TEKT5Q96M29 485 aa4.03□□□□□ -1.76
CBX3P1-201ENST00000325243 FSD1LQ9BXM9 530 aa4.03□□□□□ -1.76
CBX3P1-201ENST00000325243 GNL3LQ9NVN8 582 aaKnown RBP4.03□□□□□ -1.76
CBX3P1-201ENST00000325243 KLHL13Q9P2N7 655 aa4.03□□□□□ -1.76
CBX3P1-201ENST00000325243 MCM8Q9UJA3 840 aa4.03□□□□□ -1.76
CBX3P1-201ENST00000325243 ADAMTS5Q9UNA0 930 aa4.03□□□□□ -1.76
CBX3P1-201ENST00000325243 CFAP20Q9Y6A4 193 aaKnown RBP4.03□□□□□ -1.76
CBX3P1-201ENST00000325243 WDR17Q8IZU2 1322 aa4.02□□□□□ -1.77
CBX3P1-201ENST00000325243 CCDC187A0A096LP49 1063 aa4.02□□□□□ -1.77
CBX3P1-201ENST00000325243 KLHL33A6NCF5 533 aa4.02□□□□□ -1.77
CBX3P1-201ENST00000325243 M0QYG6 137 aa4.02□□□□□ -1.77
CBX3P1-201ENST00000325243 XPOTO43592 962 aaKnown RBP4.02□□□□□ -1.77
CBX3P1-201ENST00000325243 TLR5O60602 858 aa4.02□□□□□ -1.77
CBX3P1-201ENST00000325243 ICE2Q659A1 982 aa4.02□□□□□ -1.77
CBX3P1-201ENST00000325243 FCRL6Q6DN72 434 aa4.02□□□□□ -1.77
CBX3P1-201ENST00000325243 TRIM72Q6ZMU5 477 aa4.02□□□□□ -1.77
CBX3P1-201ENST00000325243 IRF2BP2Q7Z5L9 587 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms