RNA–Protein interactions for RNA: ENST00000325103.10

HPS1-201, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-201ENST00000325103 SIX4Q9UIU6 781 aa13.69□□□□□ -0.22
HPS1-201ENST00000325103 CDY2AQ9Y6F7 541 aa13.69□□□□□ -0.22
HPS1-201ENST00000325103 CCDC130P13994 396 aa13.68□□□□□ -0.22
HPS1-201ENST00000325103 DARSP14868 501 aaKnown RBP13.68□□□□□ -0.22
HPS1-201ENST00000325103 TCF4P15884 667 aa13.68□□□□□ -0.22
HPS1-201ENST00000325103 RNASELQ05823 741 aaKnown RBP13.68□□□□□ -0.22
HPS1-201ENST00000325103 PTPN20Q4JDL3 420 aa13.68□□□□□ -0.22
HPS1-201ENST00000325103 C15orf39Q6ZRI6 1047 aa13.68□□□□□ -0.22
HPS1-201ENST00000325103 GRK7Q8WTQ7 553 aa13.68□□□□□ -0.22
HPS1-201ENST00000325103 SOCS4Q8WXH5 440 aa13.68□□□□□ -0.22
HPS1-201ENST00000325103 CPXM1Q96SM3 734 aa13.68□□□□□ -0.22
HPS1-201ENST00000325103 CXCL16Q9H2A7 254 aa13.68□□□□□ -0.22
HPS1-201ENST00000325103 VPS37BQ9H9H4 285 aa13.68□□□□□ -0.22
HPS1-201ENST00000325103 MYADML2A6NDP7 307 aa13.68□□□□□ -0.22
HPS1-201ENST00000325103 E5RJQ4 531 aa13.68□□□□□ -0.22
HPS1-201ENST00000325103 TJP3O95049 919 aa13.68□□□□□ -0.22
HPS1-201ENST00000325103 CSPG5O95196 566 aa13.68□□□□□ -0.22
HPS1-201ENST00000325103 MFSD7Q6UXD7 560 aa13.68□□□□□ -0.22
HPS1-201ENST00000325103 AENQ8WTP8 325 aaKnown RBP13.68□□□□□ -0.22
HPS1-201ENST00000325103 BARX2Q9UMQ3 279 aaPredicted RBP13.68□□□□□ -0.22
HPS1-201ENST00000325103 UBQLN1Q9UMX0 589 aaKnown RBP13.68□□□□□ -0.22
HPS1-201ENST00000325103 STXBP5LQ9Y2K9 1186 aa13.68□□□□□ -0.22
HPS1-201ENST00000325103 PODXLO00592 558 aa13.68□□□□□ -0.22
HPS1-201ENST00000325103 MAP2K7O14733 419 aa13.68□□□□□ -0.22
HPS1-201ENST00000325103 NEFHP12036 1026 aa13.68□□□□□ -0.22
HPS1-201ENST00000325103 PRKAR2AP13861 404 aaKnown RBP13.68□□□□□ -0.22
HPS1-201ENST00000325103 SDC4P31431 198 aa13.68□□□□□ -0.22
HPS1-201ENST00000325103 ASPAP45381 313 aa13.68□□□□□ -0.22
HPS1-201ENST00000325103 BASP1P80723 227 aaKnown RBP13.68□□□□□ -0.22
HPS1-201ENST00000325103 C1QBPQ07021 282 aaKnown RBP13.68□□□□□ -0.22
HPS1-201ENST00000325103 PDCLQ13371 301 aa13.68□□□□□ -0.22
HPS1-201ENST00000325103 MTMR3Q13615 1198 aa13.68□□□□□ -0.22
HPS1-201ENST00000325103 C15orf59Q2T9L4 293 aaPredicted RBP13.68□□□□□ -0.22
HPS1-201ENST00000325103 FBXO47Q5MNV8 452 aa13.68□□□□□ -0.22
HPS1-201ENST00000325103 LRRN4Q8WUT4 740 aa13.68□□□□□ -0.22
HPS1-201ENST00000325103 RBM41Q96IZ5 413 aaKnown RBP13.68□□□□□ -0.22
HPS1-201ENST00000325103 A0A1B0GUA9 196 aa13.67□□□□□ -0.22
HPS1-201ENST00000325103 CST8O60676 142 aa13.67□□□□□ -0.22
HPS1-201ENST00000325103 CA8P35219 290 aa13.67□□□□□ -0.22
HPS1-201ENST00000325103 HSD17B3P37058 310 aa13.67□□□□□ -0.22
HPS1-201ENST00000325103 MLH1P40692 756 aa13.67□□□□□ -0.22
HPS1-201ENST00000325103 ITIH3Q06033 890 aa13.67□□□□□ -0.22
HPS1-201ENST00000325103 KYAT1Q16773 422 aa13.67□□□□□ -0.22
HPS1-201ENST00000325103 MON1BQ7L1V2 547 aa13.67□□□□□ -0.22
HPS1-201ENST00000325103 SDCBP2Q9H190 292 aa13.67□□□□□ -0.22
HPS1-201ENST00000325103 PMM2O15305 246 aa13.67□□□□□ -0.22
HPS1-201ENST00000325103 RGS16O15492 202 aaPredicted RBP13.67□□□□□ -0.22
HPS1-201ENST00000325103 GPS1Q13098 491 aa13.67□□□□□ -0.22
HPS1-201ENST00000325103 NME3Q13232 169 aa13.67□□□□□ -0.22
HPS1-201ENST00000325103 DARS2Q6PI48 645 aaKnown RBP13.67□□□□□ -0.22
HPS1-201ENST00000325103 NEUROG2Q9H2A3 272 aa13.67□□□□□ -0.22
HPS1-201ENST00000325103 ITGA11Q9UKX5 1188 aa13.67□□□□□ -0.22
HPS1-201ENST00000325103 SLC45A1Q9Y2W3 748 aa13.67□□□□□ -0.22
HPS1-201ENST00000325103 MRPL42Q9Y6G3 142 aaKnown RBP13.67□□□□□ -0.22
HPS1-201ENST00000325103 ATP2C2O75185 946 aa13.67□□□□□ -0.22
HPS1-201ENST00000325103 VDRP11473 427 aa13.67□□□□□ -0.22
HPS1-201ENST00000325103 MMP8P22894 467 aa13.67□□□□□ -0.22
HPS1-201ENST00000325103 RABGGTBP53611 331 aa13.67□□□□□ -0.22
HPS1-201ENST00000325103 RAD23BP54727 409 aa13.67□□□□□ -0.22
HPS1-201ENST00000325103 DHX34Q14147 1143 aaKnown RBP13.67□□□□□ -0.22
HPS1-201ENST00000325103 CCDC38Q502W7 563 aa13.67□□□□□ -0.22
HPS1-201ENST00000325103 ALS2CLQ60I27 953 aa13.67□□□□□ -0.22
HPS1-201ENST00000325103 ZNF467Q7Z7K2 595 aaPredicted RBP13.67□□□□□ -0.22
HPS1-201ENST00000325103 SIX6OS1Q8N1H7 587 aa13.67□□□□□ -0.22
HPS1-201ENST00000325103 TMEM40Q8WWA1 233 aa13.67□□□□□ -0.22
HPS1-201ENST00000325103 PWWP2AQ96N64 755 aa13.67□□□□□ -0.22
HPS1-201ENST00000325103 MTG1Q9BT17 334 aaPredicted RBP13.67□□□□□ -0.22
HPS1-201ENST00000325103 SYT11Q9BT88 431 aa13.67□□□□□ -0.22
HPS1-201ENST00000325103 B3GNT5Q9BYG0 378 aa13.67□□□□□ -0.22
HPS1-201ENST00000325103 DHX35Q9H5Z1 703 aaKnown RBP13.67□□□□□ -0.22
HPS1-201ENST00000325103 TTLL3Q9Y4R7 772 aa13.67□□□□□ -0.22
HPS1-201ENST00000325103 DNAH12Q6ZR08 3092 aa13.66□□□□□ -0.22
HPS1-201ENST00000325103 GOLGA8KD6RF30 607 aa13.66□□□□□ -0.22
HPS1-201ENST00000325103 POC1B-GALNT4F8VUJ3 575 aa13.66□□□□□ -0.22
HPS1-201ENST00000325103 B3GAT3O94766 335 aa13.66□□□□□ -0.22
HPS1-201ENST00000325103 RPL21P46778 160 aaKnown RBP13.66□□□□□ -0.22
HPS1-201ENST00000325103 TAF6P49848 677 aa13.66□□□□□ -0.22
HPS1-201ENST00000325103 PMS2P54278 862 aa13.66□□□□□ -0.22
HPS1-201ENST00000325103 SMAD1Q15797 465 aaKnown RBP13.66□□□□□ -0.22
HPS1-201ENST00000325103 RXFP2Q8WXD0 754 aa13.66□□□□□ -0.22
HPS1-201ENST00000325103 C9orf72Q96LT7 481 aa13.66□□□□□ -0.22
HPS1-201ENST00000325103 ZNF560Q96MR9 790 aa13.66□□□□□ -0.22
HPS1-201ENST00000325103 ASNSD1Q9NWL6 643 aa13.66□□□□□ -0.22
HPS1-201ENST00000325103 SEPT10Q9P0V9 454 aa13.66□□□□□ -0.22
HPS1-201ENST00000325103 R3HDM2Q9Y2K5 976 aaKnown RBP13.66□□□□□ -0.22
HPS1-201ENST00000325103 A6NJR5 290 aa13.66□□□□□ -0.22
HPS1-201ENST00000325103 ARSEP51690 589 aa13.66□□□□□ -0.22
HPS1-201ENST00000325103 CDC42EP1Q00587 391 aa13.66□□□□□ -0.22
HPS1-201ENST00000325103 PIGHQ14442 188 aaPredicted RBP13.66□□□□□ -0.22
HPS1-201ENST00000325103 PPP1R26Q5T8A7 1209 aaPredicted RBP13.66□□□□□ -0.22
HPS1-201ENST00000325103 PPP1R2P3Q6NXS1 205 aa13.66□□□□□ -0.22
HPS1-201ENST00000325103 MAMDC4Q6UXC1 1216 aa13.66□□□□□ -0.22
HPS1-201ENST00000325103 ANKRD42Q8N9B4 389 aa13.66□□□□□ -0.22
HPS1-201ENST00000325103 ZMAT2Q96NC0 199 aaKnown RBP13.66□□□□□ -0.22
HPS1-201ENST00000325103 AVENQ9NQS1 362 aaPredicted RBP13.66□□□□□ -0.22
HPS1-201ENST00000325103 GDF3Q9NR23 364 aa13.66□□□□□ -0.22
HPS1-201ENST00000325103 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.66□□□□□ -0.22
HPS1-201ENST00000325103 ST3GAL5Q9UNP4 418 aa13.66□□□□□ -0.22
HPS1-201ENST00000325103 FAM187AA6NFU0 413 aa13.66□□□□□ -0.22
HPS1-201ENST00000325103 ZSCAN5DPP0CG00 497 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms