RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 MTUS1Q9ULD2 1270 aa16.24■□□□□ 0.19
PRPF3-201ENST00000324862 PCDHB8Q9UN66 801 aa16.24■□□□□ 0.19
PRPF3-201ENST00000324862 INSL6Q9Y581 213 aa16.24■□□□□ 0.19
PRPF3-201ENST00000324862 C2CD2LO14523 706 aa16.23■□□□□ 0.19
PRPF3-201ENST00000324862 ATMINO43313 823 aaPredicted RBP16.23■□□□□ 0.19
PRPF3-201ENST00000324862 MICAL2O94851 1124 aa16.23■□□□□ 0.19
PRPF3-201ENST00000324862 CYP11A1P05108 521 aa16.23■□□□□ 0.19
PRPF3-201ENST00000324862 MAGEA1P43355 309 aa16.23■□□□□ 0.19
PRPF3-201ENST00000324862 SGO2Q562F6 1265 aa16.23■□□□□ 0.19
PRPF3-201ENST00000324862 VARS2Q5ST30 1063 aaKnown RBP16.23■□□□□ 0.19
PRPF3-201ENST00000324862 UNC93AQ86WB7 457 aa16.23■□□□□ 0.19
PRPF3-201ENST00000324862 TTC30AQ86WT1 665 aa16.23■□□□□ 0.19
PRPF3-201ENST00000324862 COLGALT1Q8NBJ5 622 aa16.23■□□□□ 0.19
PRPF3-201ENST00000324862 SLC2A14Q8TDB8 520 aa16.23■□□□□ 0.19
PRPF3-201ENST00000324862 SYT15Q9BQS2 421 aa16.23■□□□□ 0.19
PRPF3-201ENST00000324862 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.23■□□□□ 0.19
PRPF3-201ENST00000324862 EYSQ5T1H1 3165 aa16.23■□□□□ 0.19
PRPF3-201ENST00000324862 PIK3R2O00459 728 aa16.23■□□□□ 0.19
PRPF3-201ENST00000324862 CAPN15O75808 1086 aa16.23■□□□□ 0.19
PRPF3-201ENST00000324862 CCDC175P0C221 793 aa16.23■□□□□ 0.19
PRPF3-201ENST00000324862 UNGP13051 313 aaPredicted RBP16.23■□□□□ 0.19
PRPF3-201ENST00000324862 PTPN1P18031 435 aaKnown RBP16.23■□□□□ 0.19
PRPF3-201ENST00000324862 SPA17Q15506 151 aa16.23■□□□□ 0.19
PRPF3-201ENST00000324862 VPS36Q86VN1 386 aa16.23■□□□□ 0.19
PRPF3-201ENST00000324862 FMNL3Q8IVF7 1028 aa16.23■□□□□ 0.19
PRPF3-201ENST00000324862 CRYBG2Q8N1P7 616 aa16.23■□□□□ 0.19
PRPF3-201ENST00000324862 SLC39A11Q8N1S5 342 aa16.23■□□□□ 0.19
PRPF3-201ENST00000324862 TMEM86AQ8N2M4 240 aa16.23■□□□□ 0.19
PRPF3-201ENST00000324862 AUTS2Q8WXX7 1259 aa16.23■□□□□ 0.19
PRPF3-201ENST00000324862 PPP1R13BQ96KQ4 1090 aa16.23■□□□□ 0.19
PRPF3-201ENST00000324862 ZNF558Q96NG5 402 aa16.23■□□□□ 0.19
PRPF3-201ENST00000324862 SLC9A7Q96T83 725 aa16.23■□□□□ 0.19
PRPF3-201ENST00000324862 RAD9AQ99638 391 aa16.23■□□□□ 0.19
PRPF3-201ENST00000324862 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.23■□□□□ 0.19
PRPF3-201ENST00000324862 SF3B1O75533 1304 aaKnown RBP eCLIP16.23■□□□□ 0.19
PRPF3-201ENST00000324862 M0QYV0 167 aa16.22■□□□□ 0.19
PRPF3-201ENST00000324862 VDRP11473 427 aa16.22■□□□□ 0.19
PRPF3-201ENST00000324862 RPL17P18621 184 aaKnown RBP16.22■□□□□ 0.19
PRPF3-201ENST00000324862 PBX2P40425 430 aa16.22■□□□□ 0.19
PRPF3-201ENST00000324862 LHX1P48742 406 aa16.22■□□□□ 0.19
PRPF3-201ENST00000324862 GOLGA7BQ2TAP0 167 aa16.22■□□□□ 0.19
PRPF3-201ENST00000324862 PAQR9Q6ZVX9 377 aa16.22■□□□□ 0.19
PRPF3-201ENST00000324862 FIBCD1Q8N539 461 aa16.22■□□□□ 0.19
PRPF3-201ENST00000324862 TMEM30AQ9NV96 361 aa16.22■□□□□ 0.19
PRPF3-201ENST00000324862 SALL4Q9UJQ4 1053 aa16.22■□□□□ 0.19
PRPF3-201ENST00000324862 ESPNB1AK53 854 aa16.21■□□□□ 0.19
PRPF3-201ENST00000324862 TRAPPC3O43617 180 aa16.21■□□□□ 0.19
PRPF3-201ENST00000324862 FTLP02792 175 aaPredicted RBP16.21■□□□□ 0.19
PRPF3-201ENST00000324862 CYP1A1P04798 512 aaPredicted RBP16.21■□□□□ 0.19
PRPF3-201ENST00000324862 ARHGAP25P42331 645 aa16.21■□□□□ 0.19
PRPF3-201ENST00000324862 CACNA2D1P54289 1103 aa16.21■□□□□ 0.19
PRPF3-201ENST00000324862 NOMO3P69849 1222 aa16.21■□□□□ 0.19
PRPF3-201ENST00000324862 CLEC16AQ2KHT3 1053 aa16.21■□□□□ 0.19
PRPF3-201ENST00000324862 METTL23Q86XA0 190 aa16.21■□□□□ 0.19
PRPF3-201ENST00000324862 FUKQ8N0W3 1084 aa16.21■□□□□ 0.19
PRPF3-201ENST00000324862 PCED1BQ96HM7 432 aa16.21■□□□□ 0.19
PRPF3-201ENST00000324862 TSC2P49815 1807 aa16.21■□□□□ 0.19
PRPF3-201ENST00000324862 XIRP2A4UGR9 3374 aa16.21■□□□□ 0.19
PRPF3-201ENST00000324862 VWA8A3KMH1 1905 aa16.21■□□□□ 0.19
PRPF3-201ENST00000324862 BEST1O76090 585 aa16.21■□□□□ 0.19
PRPF3-201ENST00000324862 EFEMP2O95967 443 aa16.21■□□□□ 0.19
PRPF3-201ENST00000324862 FGFR3P22607 806 aa16.21■□□□□ 0.19
PRPF3-201ENST00000324862 DNAJB2P25686 324 aa16.21■□□□□ 0.19
PRPF3-201ENST00000324862 GALCP54803 685 aa16.21■□□□□ 0.19
PRPF3-201ENST00000324862 ARPP19P56211 112 aa16.21■□□□□ 0.19
PRPF3-201ENST00000324862 KIAA1328Q86T90 577 aa16.21■□□□□ 0.19
PRPF3-201ENST00000324862 ZNF677Q86XU0 584 aa16.21■□□□□ 0.19
PRPF3-201ENST00000324862 ARHGEF26Q96DR7 871 aa16.21■□□□□ 0.19
PRPF3-201ENST00000324862 C17orf80Q9BSJ5 609 aa16.21■□□□□ 0.19
PRPF3-201ENST00000324862 UBE2OQ9C0C9 1292 aaKnown RBP16.21■□□□□ 0.19
PRPF3-201ENST00000324862 THAP2Q9H0W7 228 aa16.21■□□□□ 0.19
PRPF3-201ENST00000324862 ADAM12O43184 909 aa16.2■□□□□ 0.18
PRPF3-201ENST00000324862 IPO7O95373 1038 aaKnown RBP16.2■□□□□ 0.18
PRPF3-201ENST00000324862 TYMPP19971 482 aa16.2■□□□□ 0.18
PRPF3-201ENST00000324862 MSNP26038 577 aaKnown RBP16.2■□□□□ 0.18
PRPF3-201ENST00000324862 TTC39CQ8N584 583 aa16.2■□□□□ 0.18
PRPF3-201ENST00000324862 TMEM169Q96HH4 297 aa16.2■□□□□ 0.18
PRPF3-201ENST00000324862 PGLYRP2Q96PD5 576 aa16.2■□□□□ 0.18
PRPF3-201ENST00000324862 GDF15Q99988 308 aa16.2■□□□□ 0.18
PRPF3-201ENST00000324862 B3GNT5Q9BYG0 378 aa16.2■□□□□ 0.18
PRPF3-201ENST00000324862 ZNF518BQ9C0D4 1074 aa16.2■□□□□ 0.18
PRPF3-201ENST00000324862 REV3LO60673 3130 aa16.2■□□□□ 0.18
PRPF3-201ENST00000324862 OAZ2O95190 189 aa16.2■□□□□ 0.18
PRPF3-201ENST00000324862 CA3P07451 260 aa16.2■□□□□ 0.18
PRPF3-201ENST00000324862 LAG3P18627 525 aa16.2■□□□□ 0.18
PRPF3-201ENST00000324862 VAV2P52735 878 aa16.2■□□□□ 0.18
PRPF3-201ENST00000324862 CNGA2Q16280 664 aa16.2■□□□□ 0.18
PRPF3-201ENST00000324862 INTS6LQ5JSJ4 861 aaKnown RBP16.2■□□□□ 0.18
PRPF3-201ENST00000324862 KLHL23Q8NBE8 558 aa16.2■□□□□ 0.18
PRPF3-201ENST00000324862 PHOSPHO2Q8TCD6 241 aa16.2■□□□□ 0.18
PRPF3-201ENST00000324862 SECISBP2LQ93073 1101 aaKnown RBP16.2■□□□□ 0.18
PRPF3-201ENST00000324862 TNIP3Q96KP6 325 aa16.2■□□□□ 0.18
PRPF3-201ENST00000324862 C11orf70Q9BRQ4 267 aa16.2■□□□□ 0.18
PRPF3-201ENST00000324862 DSEQ9UL01 958 aa16.2■□□□□ 0.18
PRPF3-201ENST00000324862 PCDHGC3Q9UN70 934 aa16.2■□□□□ 0.18
PRPF3-201ENST00000324862 PAXBP1Q9Y5B6 917 aa16.2■□□□□ 0.18
PRPF3-201ENST00000324862 LINC01553A4QN01 128 aa16.19■□□□□ 0.18
PRPF3-201ENST00000324862 GJB6O95452 261 aa16.19■□□□□ 0.18
PRPF3-201ENST00000324862 GPD2P43304 727 aa16.19■□□□□ 0.18
PRPF3-201ENST00000324862 RGS7P49802 495 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms