RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 IKBIPQ70UQ0 350 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 ZNF677Q86XU0 584 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 SPATA33Q96N06 139 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 COA1Q9GZY4 146 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 WHRNQ9P202 907 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 MKL2Q9ULH7 1088 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 HECW2Q9P2P5 1572 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 THRAP10827 490 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 CENPAP49450 140 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 PURAQ00577 322 aaKnown RBP17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 KLHL12Q53G59 568 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 MAGED4Q96JG8 741 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 DMPKQ09013 629 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 NFX1Q12986 1120 aaKnown RBP17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 BNC2Q6ZN30 1099 aaPredicted RBP17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 DPP10Q8N608 796 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 ZNF333Q96JL9 665 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 FRMD8P1Q9BZ68 369 aaPredicted RBP17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 TRIM9Q9C026 710 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 JADE3Q92613 823 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 IL12RB1P42701 662 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 DPYDQ12882 1025 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 CHMP1BQ7LBR1 199 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 C9orf72Q96LT7 481 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 RMND5AQ9H871 391 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 RXFP1Q9HBX9 757 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 SPATA2Q9UM82 520 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 PHTF1Q9UMS5 762 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 ZNF862O60290 1169 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 OASLQ15646 514 aaKnown RBP17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 TRAPPC9Q96Q05 1148 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 THUMPD3Q9BV44 507 aaKnown RBP17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 FAM192AQ9GZU8 254 aa17.54■□□□□ 0.4
SMCHD1-201ENST00000320876 SNUPNO95149 360 aaKnown RBP17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 EYA4O95677 639 aa17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 IL6P05231 212 aa17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 ZCCHC18P0CG32 403 aa17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 SERPINH1P50454 418 aaKnown RBP17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 DNAJC3Q13217 504 aa17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 TAB1Q15750 504 aa17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 PDZK1Q5T2W1 519 aa17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 EIF3LQ9Y262 564 aaKnown RBP17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 TM9SF1O15321 606 aa17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 BCL10O95999 233 aa17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 SOX11P35716 441 aa17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 CNTN1Q12860 1018 aa17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 CLEC16AQ2KHT3 1053 aa17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 HEATR4Q86WZ0 1026 aa17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 OR2W6PQ8NHA6 318 aa17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 NMD3Q96D46 503 aaKnown RBP17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 PTRHD1Q6GMV3 140 aaKnown RBP17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 HAUS6Q7Z4H7 955 aa17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 TFB1MQ8WVM0 346 aaKnown RBP17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 GLI2P10070 1586 aa17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 CFAP99D6REC4 459 aa17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 SOAT2O75908 522 aa17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 SARSP49591 514 aaKnown RBP17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 TWF1Q12792 350 aa17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 SNRNP35Q16560 246 aaKnown RBP17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 ZCWPW1Q9H0M4 648 aa17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 PIPSLA2A3N6 862 aa17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 ALDH6A1Q02252 535 aaKnown RBP17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 TMEM132DQ14C87 1099 aa17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 MYCBPAPQ8TBZ2 947 aa17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 H7C0S8 307 aa17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 CHI3L1P36222 383 aaPredicted RBP17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 INAQ16352 499 aa17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 SWSAP1Q6NVH7 229 aa17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 ARID3BQ8IVW6 561 aaPredicted RBP17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 UNC45BQ8IWX7 931 aa17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 MB21D2Q8IYB1 491 aaPredicted RBP17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 SNX13Q9Y5W8 968 aa17.53■□□□□ 0.4
SMCHD1-201ENST00000320876 HSMCR30P0CW71 290 aa17.52■□□□□ 0.4
SMCHD1-201ENST00000320876 MAPK1P28482 360 aa17.52■□□□□ 0.4
SMCHD1-201ENST00000320876 SPATA2LQ8IUW3 424 aaPredicted RBP17.52■□□□□ 0.4
SMCHD1-201ENST00000320876 IGSF1Q8N6C5 1336 aa17.52■□□□□ 0.4
SMCHD1-201ENST00000320876 WDR72Q3MJ13 1102 aa17.52■□□□□ 0.4
SMCHD1-201ENST00000320876 KCNV1Q6PIU1 500 aa17.52■□□□□ 0.4
SMCHD1-201ENST00000320876 APBB2Q92870 758 aa17.52■□□□□ 0.4
SMCHD1-201ENST00000320876 ADCK2Q7Z695 626 aa17.52■□□□□ 0.4
SMCHD1-201ENST00000320876 ABCA8O94911 1581 aa17.52■□□□□ 0.4
SMCHD1-201ENST00000320876 TBKBP1A7MCY6 615 aa17.52■□□□□ 0.4
SMCHD1-201ENST00000320876 SNRPFP62306 86 aaKnown RBP17.52■□□□□ 0.4
SMCHD1-201ENST00000320876 ARHGEF7Q14155 803 aa17.52■□□□□ 0.4
SMCHD1-201ENST00000320876 ADAM33Q9BZ11 813 aa17.52■□□□□ 0.4
SMCHD1-201ENST00000320876 MUC3BQ9H195 1237 aa17.52■□□□□ 0.4
SMCHD1-201ENST00000320876 PABPC3Q9H361 631 aaKnown RBP17.52■□□□□ 0.4
SMCHD1-201ENST00000320876 HAO1Q9UJM8 370 aa17.52■□□□□ 0.4
SMCHD1-201ENST00000320876 RGS2P41220 211 aa17.52■□□□□ 0.4
SMCHD1-201ENST00000320876 CPA2P48052 419 aa17.52■□□□□ 0.4
SMCHD1-201ENST00000320876 MROH9Q5TGP6 573 aa17.52■□□□□ 0.4
SMCHD1-201ENST00000320876 LPCAT2Q7L5N7 544 aa17.52■□□□□ 0.4
SMCHD1-201ENST00000320876 PNMA8CA0A1B0GUJ8 204 aa17.52■□□□□ 0.39
SMCHD1-201ENST00000320876 PDE9AO76083 593 aa17.52■□□□□ 0.39
SMCHD1-201ENST00000320876 CDC42EP1Q00587 391 aa17.52■□□□□ 0.39
SMCHD1-201ENST00000320876 NCOA4Q13772 614 aa17.52■□□□□ 0.39
SMCHD1-201ENST00000320876 CYP4Z1Q86W10 505 aa17.52■□□□□ 0.39
SMCHD1-201ENST00000320876 TMEM79Q9BSE2 394 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms