RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 TAS2R14Q9NYV8 317 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 TSPAN16Q9UKR8 245 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 DSEQ9UL01 958 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 CDY1Q9Y6F8 540 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 A0A087X0T9 212 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 M0QYV0 167 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 ADAM12O43184 909 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 CYP11A1P05108 521 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 CCDC172P0C7W6 258 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 FAM228BP0C875 321 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 CHRNB2P17787 502 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 PTPN1P18031 435 aaKnown RBP16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 FGFR3P22607 806 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 HNRNPH3P31942 346 aaKnown RBP16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 BMPR1AP36894 532 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 TAP1Q03518 808 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 KRT17Q04695 432 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 SGO2Q562F6 1265 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 THEM5Q8N1Q8 247 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 SLC30A5Q8TAD4 765 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 DDX1Q92499 740 aaKnown RBP16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 SYN2Q92777 582 aaPredicted RBP16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 CYFIP2Q96F07 1278 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 PCED1BQ96HM7 432 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 PYCARDQ9ULZ3 195 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 CNTN6Q9UQ52 1028 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 DAAM1Q9Y4D1 1078 aa16.37■□□□□ 0.21
PDLIM5-202ENST00000318007 UNC80Q8N2C7 3258 aa16.36■□□□□ 0.21
PDLIM5-202ENST00000318007 SYN3O14994 580 aa16.36■□□□□ 0.21
PDLIM5-202ENST00000318007 SOD2P04179 222 aa16.36■□□□□ 0.21
PDLIM5-202ENST00000318007 TNFAIP3P21580 790 aa16.36■□□□□ 0.21
PDLIM5-202ENST00000318007 DNAJB1P25685 340 aa16.36■□□□□ 0.21
PDLIM5-202ENST00000318007 PPM1AP35813 382 aa16.36■□□□□ 0.21
PDLIM5-202ENST00000318007 FMO1Q01740 532 aa16.36■□□□□ 0.21
PDLIM5-202ENST00000318007 PSMD5Q16401 504 aa16.36■□□□□ 0.21
PDLIM5-202ENST00000318007 GOLGA7BQ2TAP0 167 aa16.36■□□□□ 0.21
PDLIM5-202ENST00000318007 PLPP4Q5VZY2 271 aa16.36■□□□□ 0.21
PDLIM5-202ENST00000318007 ZNF280DQ6N043 979 aa16.36■□□□□ 0.21
PDLIM5-202ENST00000318007 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.36■□□□□ 0.21
PDLIM5-202ENST00000318007 TMC7Q7Z402 723 aa16.36■□□□□ 0.21
PDLIM5-202ENST00000318007 PHLDB2Q86SQ0 1253 aa16.36■□□□□ 0.21
PDLIM5-202ENST00000318007 C17orf53Q8N3J3 647 aaPredicted RBP16.36■□□□□ 0.21
PDLIM5-202ENST00000318007 STKLD1Q8NE28 680 aa16.36■□□□□ 0.21
PDLIM5-202ENST00000318007 MICAL1Q8TDZ2 1067 aa16.36■□□□□ 0.21
PDLIM5-202ENST00000318007 CPA5Q8WXQ8 436 aa16.36■□□□□ 0.21
PDLIM5-202ENST00000318007 TNIP3Q96KP6 325 aa16.36■□□□□ 0.21
PDLIM5-202ENST00000318007 PCDHB18PQ96TA0 734 aa16.36■□□□□ 0.21
PDLIM5-202ENST00000318007 ENTPD7Q9NQZ7 604 aa16.36■□□□□ 0.21
PDLIM5-202ENST00000318007 A0A0U1RQJ8 604 aa16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 DDX3XO00571 662 aaKnown RBP eCLIP16.35■□□□□ 0.218e-10■■■□□ 15.6
PDLIM5-202ENST00000318007 URODP06132 367 aa16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 PCSK1P29120 753 aa16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 PRKCIP41743 596 aa16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 GLUD2P49448 558 aa16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 CDR2Q01850 454 aa16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 ELAVL2Q12926 359 aaKnown RBP16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 DENND1BQ6P3S1 775 aa16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 UNC93AQ86WB7 457 aa16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 TMTC1Q8IUR5 882 aa16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 C1orf131Q8NDD1 294 aaKnown RBP16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 POF1BQ8WVV4 589 aa16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 ATRIPQ8WXE1 791 aa16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 MYLPFQ96A32 169 aa16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 FAXDC2Q96IV6 333 aa16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 TCF25Q9BQ70 676 aa16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 SLC28A3Q9HAS3 691 aa16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 ABI2Q9NYB9 513 aaPredicted RBP16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 CHORDC1Q9UHD1 332 aaPredicted RBP16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 MSRAQ9UJ68 235 aa16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 PCDHA11Q9Y5I1 949 aa16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 RFXAPO00287 272 aa16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 TULP2O00295 520 aa16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 MICAL2O94851 1124 aa16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 TYMPP19971 482 aa16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 ERVFC1P60507 584 aa16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 TSPY1Q01534 308 aa16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 INTS6LQ5JSJ4 861 aaKnown RBP16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 NAA35Q5VZE5 725 aa16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 TGS1Q96RS0 853 aaKnown RBP16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 ZNF518BQ9C0D4 1074 aa16.35■□□□□ 0.21
PDLIM5-202ENST00000318007 O00370 1275 aa16.34■□□□□ 0.21
PDLIM5-202ENST00000318007 ZNF263O14978 683 aa16.34■□□□□ 0.21
PDLIM5-202ENST00000318007 GRM6O15303 877 aa16.34■□□□□ 0.21
PDLIM5-202ENST00000318007 NRDCO43847 1150 aa16.34■□□□□ 0.21
PDLIM5-202ENST00000318007 SOAT2O75908 522 aa16.34■□□□□ 0.21
PDLIM5-202ENST00000318007 NDUFA10O95299 355 aa16.34■□□□□ 0.21
PDLIM5-202ENST00000318007 PAEPP09466 180 aa16.34■□□□□ 0.21
PDLIM5-202ENST00000318007 ABCB4P21439 1286 aa16.34■□□□□ 0.21
PDLIM5-202ENST00000318007 OR1D2P34982 312 aa16.34■□□□□ 0.21
PDLIM5-202ENST00000318007 CACNA2D1P54289 1103 aa16.34■□□□□ 0.21
PDLIM5-202ENST00000318007 BPIFB4P59827 614 aa16.34■□□□□ 0.21
PDLIM5-202ENST00000318007 DDX53Q86TM3 631 aaKnown RBP16.34■□□□□ 0.21
PDLIM5-202ENST00000318007 TTC9BQ8N6N2 239 aa16.34■□□□□ 0.21
PDLIM5-202ENST00000318007 CCDC112Q8NEF3 446 aa16.34■□□□□ 0.21
PDLIM5-202ENST00000318007 FBXO22Q8NEZ5 403 aa16.34■□□□□ 0.21
PDLIM5-202ENST00000318007 OLIG1Q8TAK6 271 aa16.34■□□□□ 0.21
PDLIM5-202ENST00000318007 GDPD5Q8WTR4 605 aa16.34■□□□□ 0.21
PDLIM5-202ENST00000318007 ACBD6Q9BR61 282 aa16.34■□□□□ 0.21
PDLIM5-202ENST00000318007 PACSIN1Q9BY11 444 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms