RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 ESR2Q92731 530 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 PIWIL1Q96J94 861 aaKnown RBP3.79□□□□□ -1.8
GEN1-201ENST00000317402 FHDC1Q9C0D6 1143 aaPredicted RBP3.79□□□□□ -1.8
GEN1-201ENST00000317402 GPR88Q9GZN0 384 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 MAF1Q9H063 256 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 SIX2Q9NPC8 291 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 PSD3Q9NYI0 1048 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 BTBD7Q9P203 1132 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 INPP5FQ9Y2H2 1132 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 FREM2Q5SZK8 3169 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 DMDP11532 3685 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 PTPRRQ15256 657 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 C10orf76Q5T2E6 689 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 SRRM1Q8IYB3 904 aaKnown RBP3.79□□□□□ -1.8
GEN1-201ENST00000317402 LRRC34Q8IZ02 419 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 LRRC8CQ8TDW0 803 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 CAMKK2Q96RR4 588 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 RAB17Q9H0T7 212 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 SEMA4AQ9H3S1 761 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 DIS3Q9Y2L1 958 aaKnown RBP3.79□□□□□ -1.8
GEN1-201ENST00000317402 COL5A3P25940 1745 aaPredicted RBP3.79□□□□□ -1.8
GEN1-201ENST00000317402 DOT1LQ8TEK3 1739 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 PHIPQ8WWQ0 1821 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 C10orf71Q711Q0 1435 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 PTPRJQ12913 1337 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 A0A1B0GW55 424 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 PPIP5K2O43314 1243 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 DUX4L2P0CJ85 424 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 DUX4L3P0CJ86 424 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 DUX4L4P0CJ87 422 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 DUX4L5P0CJ88 424 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 DUX4L6P0CJ89 424 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 DUX4L7P0CJ90 424 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 ATP4AP20648 1035 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 DYNLT1P63172 113 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 CALCOCO2Q13137 446 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 CNNM4Q6P4Q7 775 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 LONP2Q86WA8 852 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 VTI1AQ96AJ9 217 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 ARPC5LQ9BPX5 153 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 TYW1Q9NV66 732 aaKnown RBP3.79□□□□□ -1.8
GEN1-201ENST00000317402 DUX4Q9UBX2 424 aa3.79□□□□□ -1.8
GEN1-201ENST00000317402 DDX20Q9UHI6 824 aaKnown RBP3.79□□□□□ -1.8
GEN1-201ENST00000317402 ANKRD17O75179 2603 aaKnown RBP3.79□□□□□ -1.8
GEN1-201ENST00000317402 COL24A1Q17RW2 1714 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 CCDC195A0A1B0GUA6 201 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 CFAP73A6NFT4 308 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 ZBED4O75132 1171 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 AVILO75366 819 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 RPS6KA4O75676 772 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 DDNO94850 711 aaPredicted RBP3.78□□□□□ -1.8
GEN1-201ENST00000317402 MYCLP1P12525 358 aaPredicted RBP3.78□□□□□ -1.8
GEN1-201ENST00000317402 TUBA4AP68366 448 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 OCA2Q04671 838 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 ILF2Q12905 390 aaKnown RBP3.78□□□□□ -1.8
GEN1-201ENST00000317402 COASYQ13057 564 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 ARHGEF6Q15052 776 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 GEN1Q17RS7 908 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 PREPLQ4J6C6 727 aaPredicted RBP3.78□□□□□ -1.8
GEN1-201ENST00000317402 TMEM192Q8IY95 271 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 CCDC89Q8N998 374 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 C1orf131Q8NDD1 294 aaKnown RBP3.78□□□□□ -1.8
GEN1-201ENST00000317402 BSNDQ8WZ55 320 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 SDCCAG3Q96C92 435 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 TEX12Q9BXU0 123 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 DNAAF2Q9NVR5 837 aaKnown RBP3.78□□□□□ -1.8
GEN1-201ENST00000317402 TTC28Q96AY4 2481 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 SHANK3Q9BYB0 1731 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 PTPRSQ13332 1948 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 TYW5A2RUC4 315 aaKnown RBP3.78□□□□□ -1.8
GEN1-201ENST00000317402 ADM5C9JUS6 153 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 AKAP3O75969 853 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 SEMA3DO95025 777 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 BCRP11274 1271 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 ETS2P15036 469 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 ADARP55265 1226 aaKnown RBP3.78□□□□□ -1.8
GEN1-201ENST00000317402 LAMC2Q13753 1193 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 TMTC4Q5T4D3 741 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 PDXDC1Q6P996 788 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 SCARA5Q6ZMJ2 495 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 PRR23BQ6ZRT6 265 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 KRT27Q7Z3Y8 459 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 LRRC71Q8N4P6 559 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 PPP4R1Q8TF05 950 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 NUDCD1Q96RS6 583 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 TTYH3Q9C0H2 523 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 TRPV6Q9H1D0 765 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 PLSCR1O15162 318 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 PPP6R2O75170 966 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 ZBTB48P10074 688 aaPredicted RBP3.78□□□□□ -1.8
GEN1-201ENST00000317402 AMHR2Q16671 573 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 TRIM16LQ309B1 348 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 PUS10Q3MIT2 529 aaKnown RBP3.78□□□□□ -1.8
GEN1-201ENST00000317402 PARP10Q53GL7 1025 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 KCNT1Q5JUK3 1230 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 ADAM32Q8TC27 787 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 AGR3Q8TD06 166 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 ZNF473Q8WTR7 871 aaKnown RBP3.78□□□□□ -1.8
GEN1-201ENST00000317402 CCDC127Q96BQ5 260 aa3.78□□□□□ -1.8
GEN1-201ENST00000317402 ELAC2Q9BQ52 826 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms