RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 PTPRJQ12913 1337 aa16.71■□□□□ 0.27
FOXR1-201ENST00000317011 ZNF292O60281 2723 aa16.71■□□□□ 0.27
FOXR1-201ENST00000317011 MYBPHLA2RUH7 354 aa16.71■□□□□ 0.27
FOXR1-201ENST00000317011 POLR2DO15514 142 aaKnown RBP16.71■□□□□ 0.27
FOXR1-201ENST00000317011 CDR1P51861 262 aa16.71■□□□□ 0.27
FOXR1-201ENST00000317011 NLRP12P59046 1061 aa16.71■□□□□ 0.27
FOXR1-201ENST00000317011 TSPY1Q01534 308 aa16.71■□□□□ 0.27
FOXR1-201ENST00000317011 CSTF1Q05048 431 aaKnown RBP16.71■□□□□ 0.27
FOXR1-201ENST00000317011 MTAPQ13126 283 aa16.71■□□□□ 0.27
FOXR1-201ENST00000317011 PKP1Q13835 747 aa16.71■□□□□ 0.27
FOXR1-201ENST00000317011 VEPH1Q14D04 833 aa16.71■□□□□ 0.27
FOXR1-201ENST00000317011 BMT2Q1RMZ1 405 aa16.71■□□□□ 0.27
FOXR1-201ENST00000317011 CFAP221Q4G0U5 840 aa16.71■□□□□ 0.27
FOXR1-201ENST00000317011 ARHGAP29Q52LW3 1261 aa16.71■□□□□ 0.27
FOXR1-201ENST00000317011 ARHGAP15Q53QZ3 475 aa16.71■□□□□ 0.27
FOXR1-201ENST00000317011 INTS6LQ5JSJ4 861 aaKnown RBP16.71■□□□□ 0.27
FOXR1-201ENST00000317011 FAM26FQ5R3K3 315 aa16.71■□□□□ 0.27
FOXR1-201ENST00000317011 FOXD4L5Q5VV16 416 aaPredicted RBP16.71■□□□□ 0.27
FOXR1-201ENST00000317011 C1orf228Q6PIY5 440 aa16.71■□□□□ 0.27
FOXR1-201ENST00000317011 GPIHBP1Q8IV16 184 aa16.71■□□□□ 0.27
FOXR1-201ENST00000317011 C12orf56Q8IXR9 622 aa16.71■□□□□ 0.27
FOXR1-201ENST00000317011 TMEM174Q8WUU8 243 aa16.71■□□□□ 0.27
FOXR1-201ENST00000317011 FOXD4L4Q8WXT5 416 aaPredicted RBP16.71■□□□□ 0.27
FOXR1-201ENST00000317011 MYRFLQ96LU7 910 aa16.71■□□□□ 0.27
FOXR1-201ENST00000317011 LMAN1LQ9HAT1 526 aa16.71■□□□□ 0.27
FOXR1-201ENST00000317011 AGPAT3Q9NRZ7 376 aa16.71■□□□□ 0.27
FOXR1-201ENST00000317011 ABI2Q9NYB9 513 aaPredicted RBP16.71■□□□□ 0.27
FOXR1-201ENST00000317011 GTF3C4Q9UKN8 822 aa16.71■□□□□ 0.27
FOXR1-201ENST00000317011 PCDHGA2Q9Y5H1 932 aa16.71■□□□□ 0.27
FOXR1-201ENST00000317011 SNX9Q9Y5X1 595 aa16.71■□□□□ 0.27
FOXR1-201ENST00000317011 TSC2P49815 1807 aa16.7■□□□□ 0.26
FOXR1-201ENST00000317011 FANCMQ8IYD8 2048 aa16.7■□□□□ 0.26
FOXR1-201ENST00000317011 SPTBN4Q9H254 2564 aa16.7■□□□□ 0.26
FOXR1-201ENST00000317011 PRAMEF12O95522 483 aa16.7■□□□□ 0.26
FOXR1-201ENST00000317011 CST3P01034 146 aaPredicted RBP16.7■□□□□ 0.26
FOXR1-201ENST00000317011 CCNE1P24864 410 aa16.7■□□□□ 0.26
FOXR1-201ENST00000317011 DDX6P26196 483 aaKnown RBP eCLIP16.7■□□□□ 0.26
FOXR1-201ENST00000317011 ASIC1P78348 528 aa16.7■□□□□ 0.26
FOXR1-201ENST00000317011 WDR44Q5JSH3 913 aa16.7■□□□□ 0.26
FOXR1-201ENST00000317011 WDR49Q8IV35 697 aa16.7■□□□□ 0.26
FOXR1-201ENST00000317011 CMTM8Q8IZV2 173 aa16.7■□□□□ 0.26
FOXR1-201ENST00000317011 FAM200AQ8TCP9 573 aa16.7■□□□□ 0.26
FOXR1-201ENST00000317011 KBTBD7Q8WVZ9 684 aa16.7■□□□□ 0.26
FOXR1-201ENST00000317011 FUBP3Q96I24 572 aaKnown RBP eCLIP16.7■□□□□ 0.26
FOXR1-201ENST00000317011 ANKRD36BP1Q96IX9 119 aa16.7■□□□□ 0.26
FOXR1-201ENST00000317011 FAM83CQ9BQN1 747 aa16.7■□□□□ 0.26
FOXR1-201ENST00000317011 PI4K2AQ9BTU6 479 aa16.7■□□□□ 0.26
FOXR1-201ENST00000317011 FAM126AQ9BYI3 521 aaPredicted RBP16.7■□□□□ 0.26
FOXR1-201ENST00000317011 GZF1Q9H116 711 aaPredicted RBP16.7■□□□□ 0.26
FOXR1-201ENST00000317011 ZSCAN32Q9NX65 697 aa16.7■□□□□ 0.26
FOXR1-201ENST00000317011 COL4A2P08572 1712 aa16.7■□□□□ 0.26
FOXR1-201ENST00000317011 PRPF40AO75400 957 aaKnown RBP16.69■□□□□ 0.26
FOXR1-201ENST00000317011 NOL4O94818 638 aa16.69■□□□□ 0.26
FOXR1-201ENST00000317011 KRT19P08727 400 aa16.69■□□□□ 0.26
FOXR1-201ENST00000317011 TMEM191BP0C7N4 346 aa16.69■□□□□ 0.26
FOXR1-201ENST00000317011 CSH1P0DML2 217 aa16.69■□□□□ 0.26
FOXR1-201ENST00000317011 CSH2P0DML3 217 aa16.69■□□□□ 0.26
FOXR1-201ENST00000317011 CYP2F1P24903 491 aa16.69■□□□□ 0.26
FOXR1-201ENST00000317011 LMO2P25791 158 aa16.69■□□□□ 0.26
FOXR1-201ENST00000317011 GPR15P49685 360 aa16.69■□□□□ 0.26
FOXR1-201ENST00000317011 CYP4F8P98187 520 aa16.69■□□□□ 0.26
FOXR1-201ENST00000317011 PLCB2Q00722 1185 aa16.69■□□□□ 0.26
FOXR1-201ENST00000317011 MYL7Q01449 175 aa16.69■□□□□ 0.26
FOXR1-201ENST00000317011 BFSP1Q12934 665 aa16.69■□□□□ 0.26
FOXR1-201ENST00000317011 MYO1EQ12965 1108 aa16.69■□□□□ 0.26
FOXR1-201ENST00000317011 GAS6Q14393 721 aa16.69■□□□□ 0.26
FOXR1-201ENST00000317011 PSMD6Q15008 389 aa16.69■□□□□ 0.26
FOXR1-201ENST00000317011 LMBRD2Q68DH5 695 aaPredicted RBP16.69■□□□□ 0.26
FOXR1-201ENST00000317011 TRAPPC11Q7Z392 1133 aa16.69■□□□□ 0.26
FOXR1-201ENST00000317011 MON1AQ86VX9 555 aa16.69■□□□□ 0.26
FOXR1-201ENST00000317011 RALGPS2Q86X27 583 aaPredicted RBP16.69■□□□□ 0.26
FOXR1-201ENST00000317011 YAF2Q8IY57 180 aa16.69■□□□□ 0.26
FOXR1-201ENST00000317011 CELF5Q8N6W0 485 aaKnown RBP16.69■□□□□ 0.26
FOXR1-201ENST00000317011 BPIFB1Q8TDL5 484 aa16.69■□□□□ 0.26
FOXR1-201ENST00000317011 TRMT2BQ96GJ1 504 aaKnown RBP16.69■□□□□ 0.26
FOXR1-201ENST00000317011 HPDLQ96IR7 371 aa16.69■□□□□ 0.26
FOXR1-201ENST00000317011 CGNQ9P2M7 1197 aaKnown RBP16.69■□□□□ 0.26
FOXR1-201ENST00000317011 CFAP45Q9UL16 551 aa16.69■□□□□ 0.26
FOXR1-201ENST00000317011 NDRG2Q9UN36 371 aaKnown RBP16.69■□□□□ 0.26
FOXR1-201ENST00000317011 UBE4BO95155 1302 aa16.69■□□□□ 0.26
FOXR1-201ENST00000317011 DCHS1Q96JQ0 3298 aa16.68■□□□□ 0.26
FOXR1-201ENST00000317011 DPYSL4O14531 572 aa16.68■□□□□ 0.26
FOXR1-201ENST00000317011 HCRTO43612 131 aa16.68■□□□□ 0.26
FOXR1-201ENST00000317011 KLRC4O43908 158 aa16.68■□□□□ 0.26
FOXR1-201ENST00000317011 SLFN14P0C7P3 912 aa16.68■□□□□ 0.26
FOXR1-201ENST00000317011 WARSP23381 471 aaKnown RBP16.68■□□□□ 0.26
FOXR1-201ENST00000317011 ACAT1P24752 427 aaKnown RBP16.68■□□□□ 0.26
FOXR1-201ENST00000317011 PCSK1P29120 753 aa16.68■□□□□ 0.26
FOXR1-201ENST00000317011 CASP1P29466 404 aa16.68■□□□□ 0.26
FOXR1-201ENST00000317011 MAGEA11P43364 429 aa16.68■□□□□ 0.26
FOXR1-201ENST00000317011 RPL10AP62906 217 aaKnown RBP16.68■□□□□ 0.26
FOXR1-201ENST00000317011 DNM1Q05193 864 aaKnown RBP16.68■□□□□ 0.26
FOXR1-201ENST00000317011 CUL4BQ13620 913 aa16.68■□□□□ 0.26
FOXR1-201ENST00000317011 SNRNP35Q16560 246 aaKnown RBP16.68■□□□□ 0.26
FOXR1-201ENST00000317011 DDR2Q16832 855 aa16.68■□□□□ 0.26
FOXR1-201ENST00000317011 TXNDC11Q6PKC3 985 aa16.68■□□□□ 0.26
FOXR1-201ENST00000317011 ADGRF2Q8IZF7 708 aa16.68■□□□□ 0.26
FOXR1-201ENST00000317011 CSGALNACT1Q8TDX6 532 aa16.68■□□□□ 0.26
FOXR1-201ENST00000317011 ZNF516Q92618 1163 aa16.68■□□□□ 0.26
FOXR1-201ENST00000317011 BLZF1Q9H2G9 400 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms