RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 HOXA11P31270 313 aaPredicted RBP13.12□□□□□ -0.31
RNF4-201ENST00000314289 SLCO1A2P46721 670 aa13.12□□□□□ -0.31
RNF4-201ENST00000314289 PSMC1P62191 440 aaKnown RBP13.12□□□□□ -0.31
RNF4-201ENST00000314289 RAB6CQ53S08 254 aa13.12□□□□□ -0.31
RNF4-201ENST00000314289 MFSD7Q6UXD7 560 aa13.12□□□□□ -0.31
RNF4-201ENST00000314289 TLK2Q86UE8 772 aa13.12□□□□□ -0.31
RNF4-201ENST00000314289 TAB3Q8N5C8 712 aaPredicted RBP13.12□□□□□ -0.31
RNF4-201ENST00000314289 RAPGEF5Q92565 580 aa13.12□□□□□ -0.31
RNF4-201ENST00000314289 EMID1Q96A84 441 aaPredicted RBP13.12□□□□□ -0.31
RNF4-201ENST00000314289 ADPGKQ9BRR6 497 aa13.12□□□□□ -0.31
RNF4-201ENST00000314289 PLVAPQ9BX97 442 aa13.12□□□□□ -0.31
RNF4-201ENST00000314289 NFKBIZQ9BYH8 718 aa13.12□□□□□ -0.31
RNF4-201ENST00000314289 RAB6CQ9H0N0 254 aa13.12□□□□□ -0.31
RNF4-201ENST00000314289 EPN3Q9H201 632 aa13.12□□□□□ -0.31
RNF4-201ENST00000314289 NXF3Q9H4D5 531 aaKnown RBP13.12□□□□□ -0.31
RNF4-201ENST00000314289 CD248Q9HCU0 757 aa13.12□□□□□ -0.31
RNF4-201ENST00000314289 TUBGCP4Q9UGJ1 667 aa13.12□□□□□ -0.31
RNF4-201ENST00000314289 PCSK1NQ9UHG2 260 aa13.12□□□□□ -0.31
RNF4-201ENST00000314289 CEP83Q9Y592 693 aa13.12□□□□□ -0.31
RNF4-201ENST00000314289 CITO14578 2027 aa13.12□□□□□ -0.31
RNF4-201ENST00000314289 GOLGA6L10A6NI86 522 aa13.12□□□□□ -0.31
RNF4-201ENST00000314289 TREHO43280 583 aa13.12□□□□□ -0.31
RNF4-201ENST00000314289 ERBB2P04626 1255 aa13.12□□□□□ -0.31
RNF4-201ENST00000314289 MYL3P08590 195 aa13.12□□□□□ -0.31
RNF4-201ENST00000314289 MYZAPP0CAP1 466 aa13.12□□□□□ -0.31
RNF4-201ENST00000314289 CYP2C9P11712 490 aa13.12□□□□□ -0.31
RNF4-201ENST00000314289 NDST1P52848 882 aa13.12□□□□□ -0.31
RNF4-201ENST00000314289 SLC29A2Q14542 456 aa13.12□□□□□ -0.31
RNF4-201ENST00000314289 KRT71Q3SY84 523 aa13.12□□□□□ -0.31
RNF4-201ENST00000314289 KDM7AQ6ZMT4 941 aa13.12□□□□□ -0.31
RNF4-201ENST00000314289 GLIS1Q8NBF1 620 aa13.12□□□□□ -0.31
RNF4-201ENST00000314289 VCPIP1Q96JH7 1222 aa13.12□□□□□ -0.31
RNF4-201ENST00000314289 FAM49BQ9NUQ9 324 aa13.12□□□□□ -0.31
RNF4-201ENST00000314289 SLC45A1Q9Y2W3 748 aa13.12□□□□□ -0.31
RNF4-201ENST00000314289 LRRD1A4D1F6 860 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 RGS7P49802 495 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 PMS2P54278 862 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 PTPN11Q06124 597 aaPredicted RBP13.11□□□□□ -0.31
RNF4-201ENST00000314289 PPP2R5EQ16537 467 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 CYP1B1Q16678 543 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 ODF2Q5BJF6 829 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 ZNF467Q7Z7K2 595 aaPredicted RBP13.11□□□□□ -0.31
RNF4-201ENST00000314289 PIWIL1Q96J94 861 aaKnown RBP13.11□□□□□ -0.31
RNF4-201ENST00000314289 ATP6V1G3Q96LB4 118 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 DCLK3Q9C098 648 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 EPB41L4BQ9H329 900 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 METTL5Q9NRN9 209 aaKnown RBP13.11□□□□□ -0.31
RNF4-201ENST00000314289 IP6K2Q9UHH9 426 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 SNX9Q9Y5X1 595 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 MICAL2O94851 1124 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 CALB1P05937 261 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 ZSCAN5DPP0CG00 497 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 KRT3P12035 628 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 CHKAP35790 457 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 FNTAP49354 379 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 TAF5Q15542 800 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 PTGISQ16647 500 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 FAM187BQ17R55 369 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 SH3PXD2AQ5TCZ1 1133 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 MICALCLQ6ZW33 695 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 PAXIP1Q6ZW49 1069 aaPredicted RBP13.11□□□□□ -0.31
RNF4-201ENST00000314289 TMEM176AQ96HP8 235 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 PASKQ96RG2 1323 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 CCT8L2Q96SF2 557 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 BCO2Q9BYV7 579 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 CXorf56Q9H5V9 222 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 LRRC19Q9H756 370 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 GJD2Q9UKL4 321 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 NOVA2Q9UNW9 492 aaKnown RBP13.11□□□□□ -0.31
RNF4-201ENST00000314289 TCRBV5S1A1TA0A578 114 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 PODXLO00592 558 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 CILPO75339 1184 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 ETS1P14921 441 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 PSMA2P25787 234 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 NFX1Q12986 1120 aaKnown RBP13.11□□□□□ -0.31
RNF4-201ENST00000314289 IQSEC1Q6DN90 963 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 GSTA5Q7RTV2 222 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 NLRP14Q86W24 1093 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 TRIM6Q9C030 488 aaPredicted RBP13.11□□□□□ -0.31
RNF4-201ENST00000314289 GOLGA2P5Q9HBQ8 144 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 TMBIM4Q9HC24 238 aa13.11□□□□□ -0.31
RNF4-201ENST00000314289 TP73O15350 636 aa13.1□□□□□ -0.31
RNF4-201ENST00000314289 EIF4BP23588 611 aaKnown RBP13.1□□□□□ -0.31
RNF4-201ENST00000314289 ADCY8P40145 1251 aa13.1□□□□□ -0.31
RNF4-201ENST00000314289 CLUL1Q15846 466 aa13.1□□□□□ -0.31
RNF4-201ENST00000314289 MYCBPAPQ8TBZ2 947 aa13.1□□□□□ -0.31
RNF4-201ENST00000314289 DDX23Q9BUQ8 820 aaKnown RBP13.1□□□□□ -0.31
RNF4-201ENST00000314289 RNF39Q9H2S5 420 aa13.1□□□□□ -0.31
RNF4-201ENST00000314289 ADAMTS10Q9H324 1103 aa13.1□□□□□ -0.31
RNF4-201ENST00000314289 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.1□□□□□ -0.31
RNF4-201ENST00000314289 CACNG4Q9UBN1 327 aa13.1□□□□□ -0.31
RNF4-201ENST00000314289 PSTPIP1O43586 416 aa13.1□□□□□ -0.31
RNF4-201ENST00000314289 PPFIA2O75334 1257 aa13.1□□□□□ -0.31
RNF4-201ENST00000314289 GPR32O75388 356 aa13.1□□□□□ -0.31
RNF4-201ENST00000314289 ACSL3O95573 720 aa13.1□□□□□ -0.31
RNF4-201ENST00000314289 LSM8O95777 96 aaKnown RBP13.1□□□□□ -0.31
RNF4-201ENST00000314289 CD48P09326 243 aa13.1□□□□□ -0.31
RNF4-201ENST00000314289 CYP3A5P20815 502 aa13.1□□□□□ -0.31
RNF4-201ENST00000314289 IL1R2P27930 398 aa13.1□□□□□ -0.31
RNF4-201ENST00000314289 CALCOCO2Q13137 446 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms