RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 RASA4O43374 803 aa12.17□□□□□ -0.46
PTPN2-201ENST00000309660 HBP1O60381 514 aa12.17□□□□□ -0.46
PTPN2-201ENST00000309660 MAP3K6O95382 1288 aa12.17□□□□□ -0.46
PTPN2-201ENST00000309660 CD48P09326 243 aa12.17□□□□□ -0.46
PTPN2-201ENST00000309660 PAEPP09466 180 aa12.17□□□□□ -0.46
PTPN2-201ENST00000309660 KRT15P19012 456 aa12.17□□□□□ -0.46
PTPN2-201ENST00000309660 STX2P32856 288 aa12.17□□□□□ -0.46
PTPN2-201ENST00000309660 NRLP54845 237 aa12.17□□□□□ -0.46
PTPN2-201ENST00000309660 SURF1Q15526 300 aa12.17□□□□□ -0.46
PTPN2-201ENST00000309660 TFDP3Q5H9I0 405 aa12.17□□□□□ -0.46
PTPN2-201ENST00000309660 CDCA5Q96FF9 252 aa12.17□□□□□ -0.46
PTPN2-201ENST00000309660 ERAP1Q9NZ08 941 aa12.17□□□□□ -0.46
PTPN2-201ENST00000309660 CNTN6Q9UQ52 1028 aa12.17□□□□□ -0.46
PTPN2-201ENST00000309660 NAALADL1Q9UQQ1 740 aa12.17□□□□□ -0.46
PTPN2-201ENST00000309660 OSBPP22059 807 aa12.17□□□□□ -0.46
PTPN2-201ENST00000309660 CAV1Q03135 178 aa12.17□□□□□ -0.46
PTPN2-201ENST00000309660 PIGHQ14442 188 aaPredicted RBP12.17□□□□□ -0.46
PTPN2-201ENST00000309660 TAF5Q15542 800 aa12.17□□□□□ -0.46
PTPN2-201ENST00000309660 FAM102AQ5T9C2 384 aaPredicted RBP12.17□□□□□ -0.46
PTPN2-201ENST00000309660 CDCA2Q69YH5 1023 aaPredicted RBP12.17□□□□□ -0.46
PTPN2-201ENST00000309660 RFX6Q8HWS3 928 aa12.17□□□□□ -0.46
PTPN2-201ENST00000309660 ACTL9Q8TC94 416 aa12.17□□□□□ -0.46
PTPN2-201ENST00000309660 AFG1LQ8WV93 481 aa12.17□□□□□ -0.46
PTPN2-201ENST00000309660 ROPN1BQ9BZX4 212 aaPredicted RBP12.17□□□□□ -0.46
PTPN2-201ENST00000309660 SDCBP2Q9H190 292 aa12.17□□□□□ -0.46
PTPN2-201ENST00000309660 ROPN1Q9HAT0 212 aaPredicted RBP12.17□□□□□ -0.46
PTPN2-201ENST00000309660 MCM3APO60318 1980 aa12.16□□□□□ -0.46
PTPN2-201ENST00000309660 LSM8O95777 96 aaKnown RBP12.16□□□□□ -0.46
PTPN2-201ENST00000309660 IL1R2P27930 398 aa12.16□□□□□ -0.46
PTPN2-201ENST00000309660 RGS7P49802 495 aa12.16□□□□□ -0.46
PTPN2-201ENST00000309660 OTUD4Q01804 1114 aaKnown RBP12.16□□□□□ -0.46
PTPN2-201ENST00000309660 MBTD1Q05BQ5 628 aa12.16□□□□□ -0.46
PTPN2-201ENST00000309660 PDIA2Q13087 525 aaKnown RBP12.16□□□□□ -0.46
PTPN2-201ENST00000309660 SCYL2Q6P3W7 929 aa12.16□□□□□ -0.46
PTPN2-201ENST00000309660 TSHZ1Q6ZSZ6 1077 aa12.16□□□□□ -0.46
PTPN2-201ENST00000309660 ARMCX2Q7L311 632 aa12.16□□□□□ -0.46
PTPN2-201ENST00000309660 KCTD6Q8NC69 237 aa12.16□□□□□ -0.46
PTPN2-201ENST00000309660 BBOF1Q8ND07 529 aa12.16□□□□□ -0.46
PTPN2-201ENST00000309660 C3orf20Q8ND61 904 aa12.16□□□□□ -0.46
PTPN2-201ENST00000309660 SERPINB12Q96P63 405 aa12.16□□□□□ -0.46
PTPN2-201ENST00000309660 FAM49AQ9H0Q0 323 aaPredicted RBP12.16□□□□□ -0.46
PTPN2-201ENST00000309660 SIX4Q9UIU6 781 aa12.16□□□□□ -0.46
PTPN2-201ENST00000309660 hCG_1818297A0A087WSY0 165 aa12.16□□□□□ -0.46
PTPN2-201ENST00000309660 DNM1LO00429 736 aa12.16□□□□□ -0.46
PTPN2-201ENST00000309660 ABLIM1O14639 778 aa12.16□□□□□ -0.46
PTPN2-201ENST00000309660 EIF4BP23588 611 aaKnown RBP12.16□□□□□ -0.46
PTPN2-201ENST00000309660 ATP5DP30049 168 aa12.16□□□□□ -0.46
PTPN2-201ENST00000309660 PHKA2P46019 1235 aa12.16□□□□□ -0.46
PTPN2-201ENST00000309660 YWHAEP62258 255 aaKnown RBP12.16□□□□□ -0.46
PTPN2-201ENST00000309660 LMNB2Q03252 620 aa12.16□□□□□ -0.46
PTPN2-201ENST00000309660 FAM47EQ6ZV65 393 aa12.16□□□□□ -0.46
PTPN2-201ENST00000309660 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.16□□□□□ -0.46
PTPN2-201ENST00000309660 ZC3H18Q86VM9 953 aaKnown RBP12.16□□□□□ -0.46
PTPN2-201ENST00000309660 RSAD2Q8WXG1 361 aa12.16□□□□□ -0.46
PTPN2-201ENST00000309660 ZNF317Q96PQ6 595 aaPredicted RBP12.16□□□□□ -0.46
PTPN2-201ENST00000309660 NKIRAS1Q9NYS0 192 aa12.16□□□□□ -0.46
PTPN2-201ENST00000309660 LRCH4O75427 683 aa12.16□□□□□ -0.46
PTPN2-201ENST00000309660 ADCYAP1R1P41586 468 aa12.16□□□□□ -0.46
PTPN2-201ENST00000309660 MNAT1P51948 309 aa12.16□□□□□ -0.46
PTPN2-201ENST00000309660 ATP11AP98196 1134 aa12.16□□□□□ -0.46
PTPN2-201ENST00000309660 GAD2Q05329 585 aa12.16□□□□□ -0.46
PTPN2-201ENST00000309660 HADHQ16836 314 aaKnown RBP12.16□□□□□ -0.46
PTPN2-201ENST00000309660 PLPPR4Q7Z2D5 763 aa12.16□□□□□ -0.46
PTPN2-201ENST00000309660 C4orf33Q8N1A6 199 aa12.16□□□□□ -0.46
PTPN2-201ENST00000309660 SGIP1Q9BQI5 828 aa12.16□□□□□ -0.46
PTPN2-201ENST00000309660 FZD8Q9H461 694 aa12.16□□□□□ -0.46
PTPN2-201ENST00000309660 KIF9Q9HAQ2 790 aa12.16□□□□□ -0.46
PTPN2-201ENST00000309660 EVPLQ92817 2033 aa12.15□□□□□ -0.46
PTPN2-201ENST00000309660 MED7O43513 233 aa12.15□□□□□ -0.46
PTPN2-201ENST00000309660 RNF8O76064 485 aa12.15□□□□□ -0.46
PTPN2-201ENST00000309660 ERBB2P04626 1255 aa12.15□□□□□ -0.46
PTPN2-201ENST00000309660 RAD23BP54727 409 aa12.15□□□□□ -0.46
PTPN2-201ENST00000309660 BASP1P80723 227 aaKnown RBP12.15□□□□□ -0.46
PTPN2-201ENST00000309660 PTPN11Q06124 597 aaPredicted RBP12.15□□□□□ -0.46
PTPN2-201ENST00000309660 OR6B2Q6IFH4 312 aa12.15□□□□□ -0.46
PTPN2-201ENST00000309660 KCNV1Q6PIU1 500 aa12.15□□□□□ -0.46
PTPN2-201ENST00000309660 KIAA0319LQ8IZA0 1049 aa12.15□□□□□ -0.46
PTPN2-201ENST00000309660 C12orf29Q8N999 325 aa12.15□□□□□ -0.46
PTPN2-201ENST00000309660 LRRN4Q8WUT4 740 aa12.15□□□□□ -0.46
PTPN2-201ENST00000309660 HPDLQ96IR7 371 aa12.15□□□□□ -0.46
PTPN2-201ENST00000309660 APOL6Q9BWW8 343 aa12.15□□□□□ -0.46
PTPN2-201ENST00000309660 NSRP1Q9H0G5 558 aaKnown RBP12.15□□□□□ -0.46
PTPN2-201ENST00000309660 STRIP2Q9ULQ0 834 aa12.15□□□□□ -0.46
PTPN2-201ENST00000309660 TPX2Q9ULW0 747 aaKnown RBP12.15□□□□□ -0.46
PTPN2-201ENST00000309660 SPDYE5A6NIY4 337 aa12.15□□□□□ -0.46
PTPN2-201ENST00000309660 GAS2O43903 313 aaKnown RBP12.15□□□□□ -0.46
PTPN2-201ENST00000309660 CDH16O75309 829 aa12.15□□□□□ -0.46
PTPN2-201ENST00000309660 LGALS2P05162 132 aa12.15□□□□□ -0.46
PTPN2-201ENST00000309660 KLRC2P26717 231 aa12.15□□□□□ -0.46
PTPN2-201ENST00000309660 CDKN2BP42772 138 aa12.15□□□□□ -0.46
PTPN2-201ENST00000309660 GDF10P55107 478 aa12.15□□□□□ -0.46
PTPN2-201ENST00000309660 MPP2Q14168 576 aa12.15□□□□□ -0.46
PTPN2-201ENST00000309660 SH3PXD2AQ5TCZ1 1133 aa12.15□□□□□ -0.46
PTPN2-201ENST00000309660 PPP1R2P3Q6NXS1 205 aa12.15□□□□□ -0.46
PTPN2-201ENST00000309660 C6orf89Q6UWU4 347 aa12.15□□□□□ -0.46
PTPN2-201ENST00000309660 ARMC9Q7Z3E5 817 aa12.15□□□□□ -0.46
PTPN2-201ENST00000309660 UBR7Q8N806 425 aa12.15□□□□□ -0.46
PTPN2-201ENST00000309660 ADPGKQ9BRR6 497 aa12.15□□□□□ -0.46
PTPN2-201ENST00000309660 ELOVL4Q9GZR5 314 aa12.15□□□□□ -0.46
PTPN2-201ENST00000309660 HAUS2Q9NVX0 235 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms